RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 NUCB2P80303 420 aa27.02■■□□□ 1.92
CDC42EP4-205ENST00000580315 RTP2Q5QGT7 225 aa27.02■■□□□ 1.92
CDC42EP4-205ENST00000580315 CNNM4Q6P4Q7 775 aa27.02■■□□□ 1.92
CDC42EP4-205ENST00000580315 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.02■■□□□ 1.92
CDC42EP4-205ENST00000580315 CD302Q8IX05 232 aa27.02■■□□□ 1.92
CDC42EP4-205ENST00000580315 SYCP3Q8IZU3 236 aa27.02■■□□□ 1.92
CDC42EP4-205ENST00000580315 POMGNT1Q8WZA1 660 aa27.02■■□□□ 1.92
CDC42EP4-205ENST00000580315 C18orf25Q96B23 403 aaPredicted RBP27.02■■□□□ 1.92
CDC42EP4-205ENST00000580315 TMEM206Q9H813 350 aa27.02■■□□□ 1.92
CDC42EP4-205ENST00000580315 AGO2Q9UKV8 859 aaKnown RBP27.02■■□□□ 1.92
CDC42EP4-205ENST00000580315 DUSP12Q9UNI6 340 aa27.02■■□□□ 1.92
CDC42EP4-205ENST00000580315 CCDC195A0A1B0GUA6 201 aa27.01■■□□□ 1.91
CDC42EP4-205ENST00000580315 XPOTO43592 962 aaKnown RBP27.01■■□□□ 1.91
CDC42EP4-205ENST00000580315 N4BP1O75113 896 aaKnown RBP27.01■■□□□ 1.91
CDC42EP4-205ENST00000580315 GLUD1P00367 558 aa27.01■■□□□ 1.91
CDC42EP4-205ENST00000580315 MYBP10242 640 aa27.01■■□□□ 1.91
CDC42EP4-205ENST00000580315 ENOX2Q16206 610 aaKnown RBP27.01■■□□□ 1.91
CDC42EP4-205ENST00000580315 PIK3R5Q8WYR1 880 aa27.01■■□□□ 1.91
CDC42EP4-205ENST00000580315 KIF12Q96FN5 646 aa27.01■■□□□ 1.91
CDC42EP4-205ENST00000580315 CPSF3Q9UKF6 684 aaKnown RBP27.01■■□□□ 1.91
CDC42EP4-205ENST00000580315 UBQLN1Q9UMX0 589 aaKnown RBP27.01■■□□□ 1.91
CDC42EP4-205ENST00000580315 NUB1Q9Y5A7 615 aa27.01■■□□□ 1.91
CDC42EP4-205ENST00000580315 SPTBN4Q9H254 2564 aa27■■□□□ 1.91
CDC42EP4-205ENST00000580315 PRR23AA6NEV1 266 aa27■■□□□ 1.91
CDC42EP4-205ENST00000580315 LACTBL1A8MY62 500 aa27■■□□□ 1.91
CDC42EP4-205ENST00000580315 TISP43B9A030 160 aa27■■□□□ 1.91
CDC42EP4-205ENST00000580315 PI15O43692 258 aa27■■□□□ 1.91
CDC42EP4-205ENST00000580315 C1RP00736 705 aa27■■□□□ 1.91
CDC42EP4-205ENST00000580315 AOC1P19801 751 aa27■■□□□ 1.91
CDC42EP4-205ENST00000580315 CASP5P51878 434 aa27■■□□□ 1.91
CDC42EP4-205ENST00000580315 ZBTB41Q5SVQ8 909 aa27■■□□□ 1.91
CDC42EP4-205ENST00000580315 FAM212AQ96EL1 285 aa27■■□□□ 1.91
CDC42EP4-205ENST00000580315 CHAMP1Q96JM3 812 aa27■■□□□ 1.91
CDC42EP4-205ENST00000580315 WDR6Q9NNW5 1121 aaKnown RBP27■■□□□ 1.91
CDC42EP4-205ENST00000580315 IGSF9Q9P2J2 1179 aa27■■□□□ 1.91
CDC42EP4-205ENST00000580315 SLFN14P0C7P3 912 aa26.99■■□□□ 1.91
CDC42EP4-205ENST00000580315 CYP3A5P20815 502 aa26.99■■□□□ 1.91
CDC42EP4-205ENST00000580315 KCNA1Q09470 495 aa26.99■■□□□ 1.91
CDC42EP4-205ENST00000580315 PSMD5Q16401 504 aa26.99■■□□□ 1.91
CDC42EP4-205ENST00000580315 PRSS55Q6UWB4 352 aaPredicted RBP26.99■■□□□ 1.91
CDC42EP4-205ENST00000580315 CYP26C1Q6V0L0 522 aa26.99■■□□□ 1.91
CDC42EP4-205ENST00000580315 C3orf58Q8NDZ4 430 aa26.99■■□□□ 1.91
CDC42EP4-205ENST00000580315 RHOBTB2Q9BYZ6 727 aa26.99■■□□□ 1.91
CDC42EP4-205ENST00000580315 TUBGCP4Q9UGJ1 667 aa26.99■■□□□ 1.91
CDC42EP4-205ENST00000580315 USP25Q9UHP3 1055 aa26.99■■□□□ 1.91
CDC42EP4-205ENST00000580315 FBXL21Q9UKT6 434 aa26.99■■□□□ 1.91
CDC42EP4-205ENST00000580315 C2orf16Q68DN1 1984 aa26.98■■□□□ 1.91
CDC42EP4-205ENST00000580315 A0A1B0GVL5 298 aa26.98■■□□□ 1.91
CDC42EP4-205ENST00000580315 ADRB2P07550 413 aa26.98■■□□□ 1.91
CDC42EP4-205ENST00000580315 PFKFB1P16118 471 aa26.98■■□□□ 1.91
CDC42EP4-205ENST00000580315 FGFR3P22607 806 aa26.98■■□□□ 1.91
CDC42EP4-205ENST00000580315 AFMP43652 599 aa26.98■■□□□ 1.91
CDC42EP4-205ENST00000580315 ACOT2P49753 483 aa26.98■■□□□ 1.91
CDC42EP4-205ENST00000580315 POU5F1Q01860 360 aaKnown RBP26.98■■□□□ 1.91
CDC42EP4-205ENST00000580315 SPAG1Q07617 926 aa26.98■■□□□ 1.91
CDC42EP4-205ENST00000580315 UNC13DQ70J99 1090 aa26.98■■□□□ 1.91
CDC42EP4-205ENST00000580315 FRMD5Q7Z6J6 570 aa26.98■■□□□ 1.91
CDC42EP4-205ENST00000580315 SIX5Q8N196 739 aa26.98■■□□□ 1.91
CDC42EP4-205ENST00000580315 LNX1Q8TBB1 728 aaPredicted RBP26.98■■□□□ 1.91
CDC42EP4-205ENST00000580315 SERTAD1Q9UHV2 236 aa26.98■■□□□ 1.91
CDC42EP4-205ENST00000580315 FAM186AA6NE01 2351 aa26.97■■□□□ 1.91
CDC42EP4-205ENST00000580315 RFPL2O75678 378 aa26.97■■□□□ 1.91
CDC42EP4-205ENST00000580315 PRPF6O94906 941 aaKnown RBP26.97■■□□□ 1.91
CDC42EP4-205ENST00000580315 RPL17P18621 184 aaKnown RBP26.97■■□□□ 1.91
CDC42EP4-205ENST00000580315 BRCC3P46736 316 aa26.97■■□□□ 1.91
CDC42EP4-205ENST00000580315 FAM26FQ5R3K3 315 aa26.97■■□□□ 1.91
CDC42EP4-205ENST00000580315 CD300LGQ6UXG3 332 aa26.97■■□□□ 1.91
CDC42EP4-205ENST00000580315 PALB2Q86YC2 1186 aa26.97■■□□□ 1.91
CDC42EP4-205ENST00000580315 GLYCTKQ8IVS8 523 aa26.97■■□□□ 1.91
CDC42EP4-205ENST00000580315 HDAC7Q8WUI4 952 aa26.97■■□□□ 1.91
CDC42EP4-205ENST00000580315 FGFBP2Q9BYJ0 223 aa26.97■■□□□ 1.91
CDC42EP4-205ENST00000580315 BLZF1Q9H2G9 400 aa26.97■■□□□ 1.91
CDC42EP4-205ENST00000580315 IKZF4Q9H2S9 585 aa26.97■■□□□ 1.91
CDC42EP4-205ENST00000580315 ASB7Q9H672 318 aa26.97■■□□□ 1.91
CDC42EP4-205ENST00000580315 WDR87Q6ZQQ6 2873 aa26.96■■□□□ 1.91
CDC42EP4-205ENST00000580315 CLUHO75153 1309 aa26.96■■□□□ 1.91
CDC42EP4-205ENST00000580315 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.96■■□□□ 1.91
CDC42EP4-205ENST00000580315 NARSO43776 548 aaKnown RBP26.96■■□□□ 1.91
CDC42EP4-205ENST00000580315 LDHAP00338 332 aaKnown RBP26.96■■□□□ 1.91
CDC42EP4-205ENST00000580315 SPATA31D3P0C874 917 aa26.96■■□□□ 1.91
CDC42EP4-205ENST00000580315 GARTP22102 1010 aa26.96■■□□□ 1.91
CDC42EP4-205ENST00000580315 IGFBP6P24592 240 aaPredicted RBP26.96■■□□□ 1.91
CDC42EP4-205ENST00000580315 ADSSP30520 456 aa26.96■■□□□ 1.91
CDC42EP4-205ENST00000580315 GBP2P32456 591 aaPredicted RBP26.96■■□□□ 1.91
CDC42EP4-205ENST00000580315 ZBTB6Q15916 424 aa26.96■■□□□ 1.91
CDC42EP4-205ENST00000580315 SPATA31D4Q6ZUB0 917 aa26.96■■□□□ 1.91
CDC42EP4-205ENST00000580315 CCDC105Q8IYK2 499 aa26.96■■□□□ 1.91
CDC42EP4-205ENST00000580315 BEST2Q8NFU1 509 aa26.96■■□□□ 1.91
CDC42EP4-205ENST00000580315 RSAD2Q8WXG1 361 aa26.96■■□□□ 1.91
CDC42EP4-205ENST00000580315 PLEKHA4Q9H4M7 779 aa26.96■■□□□ 1.91
CDC42EP4-205ENST00000580315 DERAQ9Y315 318 aa26.96■■□□□ 1.91
CDC42EP4-205ENST00000580315 PVALEFA0A1B0GWK0 134 aa26.95■■□□□ 1.9
CDC42EP4-205ENST00000580315 I3L4J1 428 aa26.95■■□□□ 1.9
CDC42EP4-205ENST00000580315 SYN3O14994 580 aa26.95■■□□□ 1.9
CDC42EP4-205ENST00000580315 EIF3DO15371 548 aaKnown RBP eCLIP26.95■■□□□ 1.9
CDC42EP4-205ENST00000580315 ACTN4O43707 911 aaKnown RBP26.95■■□□□ 1.9
CDC42EP4-205ENST00000580315 TKTP29401 623 aaKnown RBP26.95■■□□□ 1.9
CDC42EP4-205ENST00000580315 LRPAP1P30533 357 aa26.95■■□□□ 1.9
CDC42EP4-205ENST00000580315 MCM4P33991 863 aa26.95■■□□□ 1.9
CDC42EP4-205ENST00000580315 JADE1Q6IE81 842 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms