RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 AADACL4Q5VUY2 407 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 CORO6Q6QEF8 472 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 PDCL2Q8N4E4 241 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 TTC39CQ8N584 583 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 ZBTB38Q8NAP3 1195 aaPredicted RBP7.06□□□□□ -1.28
COPS3-216ENST00000579716 ZBTB44Q8NCP5 570 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 MOSPD2Q8NHP6 518 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 CCDC26Q8TAB7 109 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 XAGE3Q8WTP9 111 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 FAM216AQ8WUB2 273 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 NKD1Q969G9 470 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 ZBTB9Q96C00 473 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 RUNDC3BQ96NL0 473 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 TMEM74Q96NL1 305 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 TBCBQ99426 244 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 GAL3ST1Q99999 423 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 STK31Q9BXU1 1019 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 EPB41L4BQ9H329 900 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 EHD1Q9H4M9 534 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 C8orf33Q9H7E9 229 aaPredicted RBP7.06□□□□□ -1.28
COPS3-216ENST00000579716 JMJD4Q9H9V9 463 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 TMEM165Q9HC07 324 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 NMRK2Q9NPI5 230 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 TBCCD1Q9NVR7 557 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 ORC3Q9UBD5 711 aaPredicted RBP7.06□□□□□ -1.28
COPS3-216ENST00000579716 RIMKLBQ9ULI2 386 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 MROH5Q6ZUA9 1318 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 L7N2F9 121 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 TPP1O14773 563 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 SPOPO43791 374 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 TRIM16O95361 564 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 ZBED1O96006 694 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 HEXBP07686 556 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 CYP2A6P11509 494 aaPredicted RBP7.05□□□□□ -1.28
COPS3-216ENST00000579716 IL6STP40189 918 aaPredicted RBP7.05□□□□□ -1.28
COPS3-216ENST00000579716 HK2P52789 917 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 LINC00310P59036 64 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 BASP1P80723 227 aaKnown RBP7.05□□□□□ -1.28
COPS3-216ENST00000579716 ICA1Q05084 483 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 ARL13BQ3SXY8 428 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 TIGD5Q53EQ6 642 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 DGKKQ5KSL6 1271 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 WDR73Q6P4I2 378 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 RGS9BPQ6ZS82 235 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 BNIPLQ7Z465 357 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 PPFIBP1Q86W92 1011 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 HID1Q8IV36 788 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 RFWD2Q8NHY2 731 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 ANKRD7Q92527 254 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 KCNN1Q92952 543 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 USP7Q93009 1102 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 HSPBAP1Q96EW2 488 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 NTPCRQ9BSD7 190 aaKnown RBP7.05□□□□□ -1.28
COPS3-216ENST00000579716 ACAT2Q9BWD1 397 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 CARD11Q9BXL7 1154 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 SRCIN1Q9C0H9 1055 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 TRPV6Q9H1D0 765 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 SYNCQ9H7C4 482 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 ACAD9Q9H845 621 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 FAM204AQ9H8W3 233 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 VPS45Q9NRW7 570 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 HOOK1Q9UJC3 728 aaKnown RBP7.05□□□□□ -1.28
COPS3-216ENST00000579716 DNM3Q9UQ16 869 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 SAMM50Q9Y512 469 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 PCDHGB5Q9Y5G0 923 aa7.05□□□□□ -1.28
COPS3-216ENST00000579716 MYOCOSA0A1B0GUC4 107 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 LRRIQ4A6NIV6 560 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 DDX39AO00148 427 aaKnown RBP7.04□□□□□ -1.28
COPS3-216ENST00000579716 RANBP6O60518 1105 aaKnown RBP7.04□□□□□ -1.28
COPS3-216ENST00000579716 SOAT2O75908 522 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 FSBPO95073 299 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 ATP1A3P13637 1013 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 CSF2RAP15509 400 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 ZNF3P17036 446 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 PAMP19021 973 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 TPP2P29144 1249 aaPredicted RBP7.04□□□□□ -1.28
COPS3-216ENST00000579716 GRK4P32298 578 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 CSTF2P33240 577 aaKnown RBP eCLIP7.04□□□□□ -1.28
COPS3-216ENST00000579716 PPM1AP35813 382 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 CCT8P50990 548 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 RPS6KA3P51812 740 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 ARFIP1P53367 373 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 ARL4CP56559 192 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 PPARDQ03181 441 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 GRB10Q13322 594 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 CUL4AQ13619 759 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 CUL4BQ13620 913 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 MXD4Q14582 209 aaPredicted RBP7.04□□□□□ -1.28
COPS3-216ENST00000579716 ALG11Q2TAA5 492 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 RPUSD3Q6P087 351 aaKnown RBP7.04□□□□□ -1.28
COPS3-216ENST00000579716 KLC3Q6P597 504 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 DRICH1Q6PGQ1 229 aaPredicted RBP7.04□□□□□ -1.28
COPS3-216ENST00000579716 SHQ1Q6PI26 577 aaKnown RBP7.04□□□□□ -1.28
COPS3-216ENST00000579716 DBX2Q6ZNG2 339 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 RFX8Q6ZV50 586 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 HDXQ7Z353 690 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 DPP9Q86TI2 863 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 CREG2Q8IUH2 290 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 TMTC1Q8IUR5 882 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 PRR18Q8N4B5 295 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms