RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 FAM170BA6NMN3 283 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 LAD1O00515 517 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 PPEF2O14830 753 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 TOM1L1O75674 476 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 SP9P0CG40 484 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 PTPN2P17706 415 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 STARD6P59095 220 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 ADCY1Q08828 1119 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 MCM6Q14566 821 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 RABEP1Q15276 862 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 TMEM119Q4V9L6 283 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 RILPL1Q5EBL4 403 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 HYIQ5T013 277 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 RNF19BQ6ZMZ0 732 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 MTSS1LQ765P7 747 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 GPBP1Q86WP2 473 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 C1orf210Q8IVY1 113 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 MAML2Q8IZL2 1156 aaPredicted RBP9.75□□□□□ -0.85
GGA3-207ENST00000578896 DCLK2Q8N568 766 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 SPIRE2Q8WWL2 714 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 FAM212AQ96EL1 285 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 KIF12Q96FN5 646 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 BICD1Q96G01 975 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 SUSD3Q96L08 255 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 ZSWIM3Q96MP5 696 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 PGLYRP2Q96PD5 576 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 NTPCRQ9BSD7 190 aaKnown RBP9.75□□□□□ -0.85
GGA3-207ENST00000578896 IKZF4Q9H2S9 585 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 HEBP1Q9NRV9 189 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 CEP72Q9P209 647 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 KCNH3Q9ULD8 1083 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 INSL5Q9Y5Q6 135 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 TPRP12270 2363 aaKnown RBP9.75□□□□□ -0.85
GGA3-207ENST00000578896 KANSL1LA0AUZ9 987 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 LACTBL1A8MY62 500 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 H7C4K7 107 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 SYN3O14994 580 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 CLDN3O15551 220 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 MOSPD3O75425 235 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 VNN2O95498 520 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 POU2F2P09086 479 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 MYL4P12829 197 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 CPB1P15086 417 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 ATF2P15336 505 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 FCARP24071 287 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 TARSP26639 723 aaKnown RBP9.74□□□□□ -0.85
GGA3-207ENST00000578896 MARCKSP29966 332 aaPredicted RBP9.74□□□□□ -0.85
GGA3-207ENST00000578896 RPL9P32969 192 aaKnown RBP9.74□□□□□ -0.85
GGA3-207ENST00000578896 VIPR2P41587 438 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 SMTNP53814 917 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 MCL1Q07820 350 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 TWF1Q12792 350 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 KARSQ15046 597 aaKnown RBP9.74□□□□□ -0.85
GGA3-207ENST00000578896 FAM78AQ5JUQ0 283 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 PRSS36Q5K4E3 855 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 TSSK4Q6SA08 328 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 TPRG1Q6ZUI0 275 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 HAUS6Q7Z4H7 955 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 MYCT1Q8N699 235 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 SHDQ96IW2 340 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 REEP2Q9BRK0 252 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 CRISPLD1Q9H336 500 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 ZHX3Q9H4I2 956 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 C17orf75Q9HAS0 396 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 LTB4R2Q9NPC1 389 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 BLOC1S4Q9NUP1 217 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 SPATA6Q9NWH7 488 aaPredicted RBP9.74□□□□□ -0.85
GGA3-207ENST00000578896 CACNA1AO00555 2505 aa9.74□□□□□ -0.85
GGA3-207ENST00000578896 TTC26A0AVF1 554 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 SHISA7A6NL88 538 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 TISP43B9A030 160 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 K7ENM7 598 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 TULP1O00294 542 aaPredicted RBP9.73□□□□□ -0.85
GGA3-207ENST00000578896 ECI2O75521 394 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 SOAT2O75908 522 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 LMNAP02545 664 aaKnown RBP9.73□□□□□ -0.85
GGA3-207ENST00000578896 CLTAP09496 248 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 PLCG1P19174 1290 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 NMT1P30419 496 aaKnown RBP9.73□□□□□ -0.85
GGA3-207ENST00000578896 LIG4P49917 911 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 NCKAP1LP55160 1127 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 CSTF1Q05048 431 aaKnown RBP9.73□□□□□ -0.85
GGA3-207ENST00000578896 ENOX2Q16206 610 aaKnown RBP9.73□□□□□ -0.85
GGA3-207ENST00000578896 LARP1BQ659C4 914 aaKnown RBP9.73□□□□□ -0.85
GGA3-207ENST00000578896 ZNF280DQ6N043 979 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 ZPBP2Q6X784 338 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 DSTYKQ6XUX3 929 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 USP49Q70CQ1 688 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 PDZD4Q76G19 769 aaPredicted RBP9.73□□□□□ -0.85
GGA3-207ENST00000578896 TCEAL8Q8IYN2 117 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 KIAA2013Q8IYS2 634 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 APPL2Q8NEU8 664 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 ZNF512Q96ME7 567 aaPredicted RBP9.73□□□□□ -0.85
GGA3-207ENST00000578896 TMEM209Q96SK2 561 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 DDX23Q9BUQ8 820 aaKnown RBP9.73□□□□□ -0.85
GGA3-207ENST00000578896 TIPINQ9BVW5 301 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 AFF4Q9UHB7 1163 aaKnown RBP9.73□□□□□ -0.85
GGA3-207ENST00000578896 PCDHB8Q9UN66 801 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 SMC3Q9UQE7 1217 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 SLC27A5Q9Y2P5 690 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms