RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 CCDC34Q96HJ3 373 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 SUSD3Q96L08 255 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 FBXL18Q96ME1 805 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 PCIF1Q9H4Z3 704 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 RBAKQ9NYW8 714 aaPredicted RBP15.68■□□□□ 0.1
MKS1-207ENST00000578789 HSPBP1Q9NZL4 362 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 CGNQ9P2M7 1197 aaKnown RBP15.68■□□□□ 0.1
MKS1-207ENST00000578789 MTRRQ9UBK8 725 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 PRKAG3Q9UGI9 489 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 NUB1Q9Y5A7 615 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 TTC28Q96AY4 2481 aa15.67■□□□□ 0.1
MKS1-207ENST00000578789 GOLGA8IPA6NC78 632 aa15.67■□□□□ 0.1
MKS1-207ENST00000578789 GOLGA8JA6NMD2 632 aa15.67■□□□□ 0.1
MKS1-207ENST00000578789 I3L4J1 428 aa15.67■□□□□ 0.1
MKS1-207ENST00000578789 DLL1O00548 723 aa15.67■□□□□ 0.1
MKS1-207ENST00000578789 RPL17P18621 184 aaKnown RBP15.67■□□□□ 0.1
MKS1-207ENST00000578789 MCM4P33991 863 aa15.67■□□□□ 0.1
MKS1-207ENST00000578789 GUCY2FP51841 1108 aa15.67■□□□□ 0.1
MKS1-207ENST00000578789 ITIH3Q06033 890 aa15.67■□□□□ 0.1
MKS1-207ENST00000578789 KCNB1Q14721 858 aa15.67■□□□□ 0.1
MKS1-207ENST00000578789 KNOP1Q1ED39 458 aaKnown RBP15.67■□□□□ 0.1
MKS1-207ENST00000578789 ANKS3Q6ZW76 656 aa15.67■□□□□ 0.1
MKS1-207ENST00000578789 HS2ST1Q7LGA3 356 aa15.67■□□□□ 0.1
MKS1-207ENST00000578789 HDAC7Q8WUI4 952 aa15.67■□□□□ 0.1
MKS1-207ENST00000578789 NECAB3Q96P71 396 aaPredicted RBP15.67■□□□□ 0.1
MKS1-207ENST00000578789 CLSTN3Q9BQT9 956 aa15.67■□□□□ 0.1
MKS1-207ENST00000578789 SFXN1Q9H9B4 322 aa15.67■□□□□ 0.1
MKS1-207ENST00000578789 DPP7Q9UHL4 492 aa15.67■□□□□ 0.1
MKS1-207ENST00000578789 BACE2Q9Y5Z0 518 aa15.67■□□□□ 0.1
MKS1-207ENST00000578789 SCN1AP35498 2009 aa15.67■□□□□ 0.1
MKS1-207ENST00000578789 C2orf16Q68DN1 1984 aa15.66■□□□□ 0.1
MKS1-207ENST00000578789 ANO9A1A5B4 782 aa15.66■□□□□ 0.1
MKS1-207ENST00000578789 M0QZQ0 153 aa15.66■□□□□ 0.1
MKS1-207ENST00000578789 PIRO00625 290 aa15.66■□□□□ 0.1
MKS1-207ENST00000578789 PPEF2O14830 753 aa15.66■□□□□ 0.1
MKS1-207ENST00000578789 TGM5O43548 720 aa15.66■□□□□ 0.1
MKS1-207ENST00000578789 PAPLNO95428 1278 aa15.66■□□□□ 0.1
MKS1-207ENST00000578789 PAX3P23760 479 aa15.66■□□□□ 0.1
MKS1-207ENST00000578789 ZP2Q05996 745 aa15.66■□□□□ 0.1
MKS1-207ENST00000578789 MRPL58Q14197 206 aaKnown RBP15.66■□□□□ 0.1
MKS1-207ENST00000578789 C9orf57Q5W0N0 161 aa15.66■□□□□ 0.1
MKS1-207ENST00000578789 LILRA6Q6PI73 481 aa15.66■□□□□ 0.1
MKS1-207ENST00000578789 ADHFE1Q8IWW8 467 aa15.66■□□□□ 0.1
MKS1-207ENST00000578789 GOLGA5Q8TBA6 731 aa15.66■□□□□ 0.1
MKS1-207ENST00000578789 CCDC47Q96A33 483 aaKnown RBP15.66■□□□□ 0.1
MKS1-207ENST00000578789 TIGD1Q96MW7 591 aa15.66■□□□□ 0.1
MKS1-207ENST00000578789 ADAM7Q9H2U9 754 aa15.66■□□□□ 0.1
MKS1-207ENST00000578789 KIAA1586Q9HCI6 787 aa15.66■□□□□ 0.1
MKS1-207ENST00000578789 MAN1C1Q9NR34 630 aa15.66■□□□□ 0.1
MKS1-207ENST00000578789 PCDHB8Q9UN66 801 aa15.66■□□□□ 0.1
MKS1-207ENST00000578789 ZNF233A6NK53 670 aa15.65■□□□□ 0.1
MKS1-207ENST00000578789 TBC1D4O60343 1298 aa15.65■□□□□ 0.1
MKS1-207ENST00000578789 CBX2Q14781 532 aaPredicted RBP15.65■□□□□ 0.1
MKS1-207ENST00000578789 VARS2Q5ST30 1063 aaKnown RBP15.65■□□□□ 0.1
MKS1-207ENST00000578789 ELMSAN1Q6PJG2 1045 aa15.65■□□□□ 0.1
MKS1-207ENST00000578789 CBWD2Q8IUF1 395 aa15.65■□□□□ 0.1
MKS1-207ENST00000578789 CMASQ8NFW8 434 aaPredicted RBP15.65■□□□□ 0.1
MKS1-207ENST00000578789 TMEM174Q8WUU8 243 aa15.65■□□□□ 0.1
MKS1-207ENST00000578789 RHOBTB2Q9BYZ6 727 aa15.65■□□□□ 0.1
MKS1-207ENST00000578789 KCTD10Q9H3F6 313 aa15.65■□□□□ 0.1
MKS1-207ENST00000578789 PLEKHA4Q9H4M7 779 aa15.65■□□□□ 0.1
MKS1-207ENST00000578789 DPP3Q9NY33 737 aa15.65■□□□□ 0.1
MKS1-207ENST00000578789 FBXW11Q9UKB1 542 aa15.65■□□□□ 0.1
MKS1-207ENST00000578789 NCOR1O75376 2440 aa15.64■□□□□ 0.09
MKS1-207ENST00000578789 A0A0C4DFX4 3053 aa15.64■□□□□ 0.09
MKS1-207ENST00000578789 C19orf67A6NJJ6 358 aa15.64■□□□□ 0.09
MKS1-207ENST00000578789 CLIC2O15247 247 aa15.64■□□□□ 0.09
MKS1-207ENST00000578789 ADAM12O43184 909 aa15.64■□□□□ 0.09
MKS1-207ENST00000578789 LILRA4P59901 499 aa15.64■□□□□ 0.09
MKS1-207ENST00000578789 RAB33AQ14088 237 aa15.64■□□□□ 0.09
MKS1-207ENST00000578789 SURF1Q15526 300 aa15.64■□□□□ 0.09
MKS1-207ENST00000578789 SNRNP35Q16560 246 aaKnown RBP15.64■□□□□ 0.09
MKS1-207ENST00000578789 RARS2Q5T160 578 aaKnown RBP15.64■□□□□ 0.09
MKS1-207ENST00000578789 SLC8B1Q6J4K2 584 aa15.64■□□□□ 0.09
MKS1-207ENST00000578789 CES5AQ6NT32 575 aa15.64■□□□□ 0.09
MKS1-207ENST00000578789 RSPO2Q6UXX9 243 aaPredicted RBP15.64■□□□□ 0.09
MKS1-207ENST00000578789 PALB2Q86YC2 1186 aa15.64■□□□□ 0.09
MKS1-207ENST00000578789 SLC9A9Q8IVB4 645 aa15.64■□□□□ 0.09
MKS1-207ENST00000578789 GLYCTKQ8IVS8 523 aa15.64■□□□□ 0.09
MKS1-207ENST00000578789 ELOA2Q8IYF1 753 aaPredicted RBP15.64■□□□□ 0.09
MKS1-207ENST00000578789 C12orf76Q8N812 135 aaPredicted RBP15.64■□□□□ 0.09
MKS1-207ENST00000578789 XXYLT1Q8NBI6 393 aa15.64■□□□□ 0.09
MKS1-207ENST00000578789 APPL2Q8NEU8 664 aa15.64■□□□□ 0.09
MKS1-207ENST00000578789 NECTIN4Q96NY8 510 aa15.64■□□□□ 0.09
MKS1-207ENST00000578789 POP1Q99575 1024 aaKnown RBP15.64■□□□□ 0.09
MKS1-207ENST00000578789 APOL5Q9BWW9 433 aa15.64■□□□□ 0.09
MKS1-207ENST00000578789 PDE11AQ9HCR9 933 aa15.64■□□□□ 0.09
MKS1-207ENST00000578789 CUL9Q8IWT3 2517 aa15.64■□□□□ 0.09
MKS1-207ENST00000578789 H7C4K7 107 aa15.63■□□□□ 0.09
MKS1-207ENST00000578789 TNFRSF10AO00220 468 aa15.63■□□□□ 0.09
MKS1-207ENST00000578789 PDXKO00764 312 aa15.63■□□□□ 0.09
MKS1-207ENST00000578789 KIF20AO95235 890 aa15.63■□□□□ 0.09
MKS1-207ENST00000578789 TYMPP19971 482 aa15.63■□□□□ 0.09
MKS1-207ENST00000578789 MTHFRP42898 656 aa15.63■□□□□ 0.09
MKS1-207ENST00000578789 CYP2J2P51589 502 aa15.63■□□□□ 0.09
MKS1-207ENST00000578789 TFAMQ00059 246 aaKnown RBP15.63■□□□□ 0.09
MKS1-207ENST00000578789 PNOCQ13519 176 aa15.63■□□□□ 0.09
MKS1-207ENST00000578789 ZNF280DQ6N043 979 aa15.63■□□□□ 0.09
MKS1-207ENST00000578789 CYP26C1Q6V0L0 522 aa15.63■□□□□ 0.09
MKS1-207ENST00000578789 C15orf39Q6ZRI6 1047 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms