RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 EPB41L4BQ9H329 900 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PABPC3Q9H361 631 aaKnown RBP9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 AZI2Q9H6S1 392 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MRPL47Q9HD33 250 aaKnown RBP9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ADAM22Q9P0K1 906 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 WHRNQ9P202 907 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 BCCIPQ9P287 314 aaKnown RBP eCLIP9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 NOVA2Q9UNW9 492 aaKnown RBP9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 NUB1Q9Y5A7 615 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 UMODL1Q5DID0 1318 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ADM5C9JUS6 153 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 NDUFAB1O14561 156 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CXCL11O14625 94 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 OGTO15294 1046 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PEX10O60683 326 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TOM1L1O75674 476 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PAEPP09466 180 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 HPDP32754 393 aaPredicted RBP9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 KCNJ1P48048 391 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 KRT17Q04695 432 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CALCOCO2Q13137 446 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PTK6Q13882 451 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PPP1R7Q15435 360 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 KCTD19Q17RG1 926 aaPredicted RBP9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PLEKHA7Q6IQ23 1121 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 NLRP14Q86W24 1093 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SPATS2Q86XZ4 545 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 RHOT1Q8IXI2 618 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 GRK7Q8WTQ7 553 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ZNF473Q8WTR7 871 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 C1orf54Q8WWF1 131 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PRPF31Q8WWY3 499 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 RNF25Q96BH1 459 aaPredicted RBP9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 GPR20Q99678 358 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ACO2Q99798 780 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 JPH2Q9BR39 696 aaPredicted RBP9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TRIM7Q9C029 511 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 DCLK3Q9C098 648 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ASCC2Q9H1I8 757 aaPredicted RBP9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 RABEP2Q9H5N1 569 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CNOT10Q9H9A5 744 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ADARB2Q9NS39 739 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SLC12A6Q9UHW9 1150 aa9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ATXN2Q99700 1313 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-208ENST00000578525 IGKV6-21A0A0C4DH24 114 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SOCS7O14512 581 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ABLIM1O14639 778 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 FAM189A1O60320 539 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MSCO60682 206 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 LSM8O95777 96 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ASS1P00966 412 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SHBGP04278 402 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CALB1P05937 261 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CFHP08603 1231 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 RARGP13631 454 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CETN2P41208 172 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TNFSF9P41273 254 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MAGOHP61326 146 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CAV1Q03135 178 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MCL1Q07820 350 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ADCY2Q08462 1091 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 DRP2Q13474 957 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TFDP1Q14186 410 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MXD4Q14582 209 aaPredicted RBP9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PLCB4Q15147 1175 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 LY6KQ17RY6 165 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ODF2Q5BJF6 829 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CELF3Q5SZQ8 465 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 LLGL2Q6P1M3 1020 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MMS22LQ6ZRQ5 1243 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MICALCLQ6ZW33 695 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TRMT10CQ7L0Y3 403 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PLPPR4Q7Z2D5 763 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PHLDB2Q86SQ0 1253 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ZBTB33Q86T24 672 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ERO1BQ86YB8 467 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PASD1Q8IV76 773 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SULF1Q8IWU6 871 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 KATNAL2Q8IYT4 538 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 C3orf20Q8ND61 904 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 FEZF2Q8TBJ5 459 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PGM2Q96G03 612 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 FGD4Q96M96 766 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 NIF3L1Q9GZT8 377 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ELP3Q9H9T3 547 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 HOMER3Q9NSC5 361 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 IP6K2Q9UHH9 426 aa9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 FEZ2Q9UHY8 353 aaPredicted RBP9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CPSF3Q9UKF6 684 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-208ENST00000578525 LOC102724159A0A0B4J2E5 919 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SPDYE5A6NIY4 337 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TTLL13PA6NNM8 815 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 NOP56O00567 594 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TLR3O15455 904 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 RIPK2O43353 540 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CAND2O75155 1236 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ARIH2O95376 493 aa9.93□□□□□ -0.82
CDK5RAP3-208ENST00000578525 GAS8O95995 478 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms