RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 ZNF516Q92618 1163 aa23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 ELMO3Q96BJ8 720 aa23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 NGRNQ9NPE2 291 aaKnown RBP23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 CHST7Q9NS84 486 aa23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 CLDND1Q9NY35 253 aa23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 SIX4Q9UIU6 781 aa23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 TIMM13Q9Y5L4 95 aaPredicted RBP23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 TCF20Q9UGU0 1960 aaKnown RBP23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 MTCL1Q9Y4B5 1905 aaKnown RBP23.47■■□□□ 1.35
CDC42EP4-203ENST00000578516 ANO9A1A5B4 782 aa23.47■■□□□ 1.35
CDC42EP4-203ENST00000578516 ADAM12O43184 909 aa23.47■■□□□ 1.35
CDC42EP4-203ENST00000578516 XPOTO43592 962 aaKnown RBP23.47■■□□□ 1.35
CDC42EP4-203ENST00000578516 KIF20AO95235 890 aa23.47■■□□□ 1.35
CDC42EP4-203ENST00000578516 POU5F1Q01860 360 aaKnown RBP23.47■■□□□ 1.35
CDC42EP4-203ENST00000578516 DSG1Q02413 1049 aa23.47■■□□□ 1.35
CDC42EP4-203ENST00000578516 USP41Q3LFD5 358 aa23.47■■□□□ 1.35
CDC42EP4-203ENST00000578516 COBLL1Q53SF7 1204 aa23.47■■□□□ 1.35
CDC42EP4-203ENST00000578516 CENPPQ6IPU0 288 aa23.47■■□□□ 1.35
CDC42EP4-203ENST00000578516 KIAA1841Q6NSI8 718 aa23.47■■□□□ 1.35
CDC42EP4-203ENST00000578516 MFSD14AQ96MC6 490 aa23.47■■□□□ 1.35
CDC42EP4-203ENST00000578516 KLHL5Q96PQ7 755 aa23.47■■□□□ 1.35
CDC42EP4-203ENST00000578516 CGRRF1Q99675 332 aa23.47■■□□□ 1.35
CDC42EP4-203ENST00000578516 KIAA1586Q9HCI6 787 aa23.47■■□□□ 1.35
CDC42EP4-203ENST00000578516 MRPL17Q9NRX2 175 aaKnown RBP23.47■■□□□ 1.35
CDC42EP4-203ENST00000578516 INTS13Q9NVM9 706 aa23.47■■□□□ 1.35
CDC42EP4-203ENST00000578516 BARX2Q9UMQ3 279 aaPredicted RBP23.47■■□□□ 1.35
CDC42EP4-203ENST00000578516 CARNS1A5YM72 827 aa23.46■■□□□ 1.35
CDC42EP4-203ENST00000578516 LRRIQ3A6PVS8 624 aaPredicted RBP23.46■■□□□ 1.35
CDC42EP4-203ENST00000578516 H3BQ06 376 aaPredicted RBP23.46■■□□□ 1.35
CDC42EP4-203ENST00000578516 PIRO00625 290 aa23.46■■□□□ 1.35
CDC42EP4-203ENST00000578516 TMEM191BP0C7N4 346 aa23.46■■□□□ 1.35
CDC42EP4-203ENST00000578516 EPCAMP16422 314 aa23.46■■□□□ 1.35
CDC42EP4-203ENST00000578516 FGFR3P22607 806 aa23.46■■□□□ 1.35
CDC42EP4-203ENST00000578516 LTBRP36941 435 aa23.46■■□□□ 1.35
CDC42EP4-203ENST00000578516 CLUL1Q15846 466 aa23.46■■□□□ 1.35
CDC42EP4-203ENST00000578516 C2orf16Q68DN1 1984 aa23.46■■□□□ 1.35
CDC42EP4-203ENST00000578516 RSPO2Q6UXX9 243 aaPredicted RBP23.46■■□□□ 1.35
CDC42EP4-203ENST00000578516 NELFBQ8WX92 580 aa23.46■■□□□ 1.35
CDC42EP4-203ENST00000578516 TTPALQ9BTX7 342 aa23.46■■□□□ 1.35
CDC42EP4-203ENST00000578516 UBE2ZQ9H832 354 aaPredicted RBP23.46■■□□□ 1.35
CDC42EP4-203ENST00000578516 TEX28O15482 410 aa23.45■■□□□ 1.34
CDC42EP4-203ENST00000578516 TRIM49P0CI25 452 aa23.45■■□□□ 1.34
CDC42EP4-203ENST00000578516 TRIM49CP0CI26 452 aa23.45■■□□□ 1.34
CDC42EP4-203ENST00000578516 C1orf220Q5T0J3 134 aa23.45■■□□□ 1.34
CDC42EP4-203ENST00000578516 PDE12Q6L8Q7 609 aaKnown RBP23.45■■□□□ 1.34
CDC42EP4-203ENST00000578516 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.45■■□□□ 1.34
CDC42EP4-203ENST00000578516 SUSD3Q96L08 255 aa23.45■■□□□ 1.34
CDC42EP4-203ENST00000578516 DUSP9Q99956 384 aaKnown RBP23.45■■□□□ 1.34
CDC42EP4-203ENST00000578516 AGAP1Q9UPQ3 857 aa23.45■■□□□ 1.34
CDC42EP4-203ENST00000578516 KRT19P08727 400 aa23.44■■□□□ 1.34
CDC42EP4-203ENST00000578516 TNNI1P19237 187 aa23.44■■□□□ 1.34
CDC42EP4-203ENST00000578516 KCNA5P22460 613 aa23.44■■□□□ 1.34
CDC42EP4-203ENST00000578516 CCNE1P24864 410 aa23.44■■□□□ 1.34
CDC42EP4-203ENST00000578516 AARSP49588 968 aaKnown RBP eCLIP23.44■■□□□ 1.34
CDC42EP4-203ENST00000578516 BFSP1Q12934 665 aa23.44■■□□□ 1.34
CDC42EP4-203ENST00000578516 ADAM9Q13443 819 aa23.44■■□□□ 1.34
CDC42EP4-203ENST00000578516 COL19A1Q14993 1142 aa23.44■■□□□ 1.34
CDC42EP4-203ENST00000578516 PSMD5Q16401 504 aa23.44■■□□□ 1.34
CDC42EP4-203ENST00000578516 NFIL3Q16649 462 aa23.44■■□□□ 1.34
CDC42EP4-203ENST00000578516 WDR49Q8IV35 697 aa23.44■■□□□ 1.34
CDC42EP4-203ENST00000578516 EFHBQ8N7U6 833 aa23.44■■□□□ 1.34
CDC42EP4-203ENST00000578516 LNX1Q8TBB1 728 aaPredicted RBP23.44■■□□□ 1.34
CDC42EP4-203ENST00000578516 FNBP1Q96RU3 617 aa23.44■■□□□ 1.34
CDC42EP4-203ENST00000578516 APOL5Q9BWW9 433 aa23.44■■□□□ 1.34
CDC42EP4-203ENST00000578516 CDH22Q9UJ99 828 aa23.44■■□□□ 1.34
CDC42EP4-203ENST00000578516 HCFC2Q9Y5Z7 792 aa23.44■■□□□ 1.34
CDC42EP4-203ENST00000578516 IRAK3Q9Y616 596 aa23.44■■□□□ 1.34
CDC42EP4-203ENST00000578516 PSMA7O14818 248 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 LILRA4P59901 499 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 ADAM15Q13444 863 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 KCNC3Q14003 757 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 CTC1Q2NKJ3 1217 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 EDRF1Q3B7T1 1238 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 DPCR1Q3MIW9 517 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 VARS2Q5ST30 1063 aaKnown RBP23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 TTI2Q6NXR4 508 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 DSTYKQ6XUX3 929 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 NT5DC4Q86YG4 428 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 FAM186BQ8IYM0 893 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 CSGALNACT2Q8N6G5 542 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 PARD3BQ8TEW8 1205 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 SLC22A17Q8WUG5 538 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 PIK3R5Q8WYR1 880 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 PABPC5Q96DU9 382 aaKnown RBP23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 ANKRD36BP1Q96IX9 119 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 MED15Q96RN5 788 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 TSPAN18Q96SJ8 248 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 MMRN2Q9H8L6 949 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 CLEC1BQ9P126 229 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 TMEM63CQ9P1W3 806 aa23.43■■□□□ 1.34
CDC42EP4-203ENST00000578516 DOCK6Q96HP0 2047 aa23.42■■□□□ 1.34
CDC42EP4-203ENST00000578516 TNNC2P02585 160 aa23.42■■□□□ 1.34
CDC42EP4-203ENST00000578516 SPATA31D3P0C874 917 aa23.42■■□□□ 1.34
CDC42EP4-203ENST00000578516 NDUFV1P49821 464 aa23.42■■□□□ 1.34
CDC42EP4-203ENST00000578516 CDR1P51861 262 aa23.42■■□□□ 1.34
CDC42EP4-203ENST00000578516 ELAVL2Q12926 359 aaKnown RBP23.42■■□□□ 1.34
CDC42EP4-203ENST00000578516 SPATA31D4Q6ZUB0 917 aa23.42■■□□□ 1.34
CDC42EP4-203ENST00000578516 TRAPPC11Q7Z392 1133 aa23.42■■□□□ 1.34
CDC42EP4-203ENST00000578516 PALB2Q86YC2 1186 aa23.42■■□□□ 1.34
CDC42EP4-203ENST00000578516 ZC3H3Q8IXZ2 948 aaKnown RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms