RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 PGPEP1Q9NXJ5 209 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 ANKFY1Q9P2R3 1169 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 PIN4Q9Y237 131 aaKnown RBP8.69□□□□□ -1.02
COPS3-215ENST00000578317 ARID2Q68CP9 1835 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 A0A1B0GTH6 734 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 A6NJY4 79 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 SERPINC1P01008 464 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 STAG3L1P0CL83 205 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 TIMP2P16035 220 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 GTF2H1P32780 548 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 MATR3P43243 847 aaKnown RBP eCLIP8.69□□□□□ -1.02
COPS3-215ENST00000578317 CYP24A1Q07973 514 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 BFSP1Q12934 665 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 NR1I3Q14994 352 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 PSMD6Q15008 389 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 MAN2A1Q16706 1144 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 CCDC40Q4G0X9 1142 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 VWA3BQ502W6 1294 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 CBWD2Q8IUF1 395 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 BRSK2Q8IWQ3 736 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 CD302Q8IX05 232 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 C2orf49Q9BVC5 232 aaPredicted RBP8.69□□□□□ -1.02
COPS3-215ENST00000578317 WNT8AQ9H1J5 351 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 ASB7Q9H672 318 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 ZFAND3Q9H8U3 227 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 RGS18Q9NS28 235 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 GOLGA8IPA6NC78 632 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 TRIM43BA6NCK2 446 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 GOLGA8JA6NMD2 632 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 P4HA2O15460 535 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 AP5Z1O43299 807 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 STX10O60499 249 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 TPM2P07951 284 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 KRT13P13646 458 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 TCF3P15923 654 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 CYP2C18P33260 490 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 MTIF2P46199 727 aaKnown RBP8.68□□□□□ -1.02
COPS3-215ENST00000578317 ACOT2P49753 483 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 RAB27AP51159 221 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 VAMP7P51809 220 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 COPB1P53618 953 aaKnown RBP8.68□□□□□ -1.02
COPS3-215ENST00000578317 AP3M2P53677 418 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 UBASH3AP57075 661 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 PSMA6P60900 246 aaKnown RBP8.68□□□□□ -1.02
COPS3-215ENST00000578317 ENOX2Q16206 610 aaKnown RBP8.68□□□□□ -1.02
COPS3-215ENST00000578317 FILIP1LQ4L180 1135 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 XKR4Q5GH76 650 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 MIIPQ5JXC2 388 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 TWF2Q6IBS0 349 aaKnown RBP8.68□□□□□ -1.02
COPS3-215ENST00000578317 MFSD5Q6N075 450 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 ALKAL1Q6UXT8 129 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 SLC24A5Q71RS6 500 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 RTN4RL1Q86UN2 441 aaPredicted RBP8.68□□□□□ -1.02
COPS3-215ENST00000578317 CDR2LQ86X02 465 aaPredicted RBP8.68□□□□□ -1.02
COPS3-215ENST00000578317 NT5DC4Q86YG4 428 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 ZSWIM2Q8NEG5 633 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 DBF4BQ8NFT6 615 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 SEPT8Q92599 483 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 SLC35C1Q96A29 364 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 TRIM43Q96BQ3 446 aaPredicted RBP8.68□□□□□ -1.02
COPS3-215ENST00000578317 SAAL1Q96ER3 474 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 NAP1L5Q96NT1 182 aaPredicted RBP8.68□□□□□ -1.02
COPS3-215ENST00000578317 ACAP3Q96P50 834 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 HTATIP2Q9BUP3 242 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 CCDC94Q9BW85 323 aaPredicted RBP8.68□□□□□ -1.02
COPS3-215ENST00000578317 EIF2AQ9BY44 585 aaKnown RBP8.68□□□□□ -1.02
COPS3-215ENST00000578317 TRIM6Q9C030 488 aaPredicted RBP8.68□□□□□ -1.02
COPS3-215ENST00000578317 SAP130Q9H0E3 1048 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 NDST4Q9H3R1 872 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 RPF1Q9H9Y2 349 aaKnown RBP8.68□□□□□ -1.02
COPS3-215ENST00000578317 C1orf112Q9NSG2 853 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 FAM105AQ9NUU6 356 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 RBAKQ9NYW8 714 aaPredicted RBP8.68□□□□□ -1.02
COPS3-215ENST00000578317 PCDHB2Q9Y5E7 798 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.68□□□□□ -1.02
COPS3-215ENST00000578317 UMODL1Q5DID0 1318 aa8.68□□□□□ -1.02
COPS3-215ENST00000578317 KAT6AQ92794 2004 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 TNRC18O15417 2968 aaPredicted RBP8.67□□□□□ -1.02
COPS3-215ENST00000578317 TTC26A0AVF1 554 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 GTPBP10A4D1E9 387 aaKnown RBP8.67□□□□□ -1.02
COPS3-215ENST00000578317 CCDC85CA6NKD9 419 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 LGALS16A8MUM7 142 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 C9IYK1 514 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 ENPP3O14638 875 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 CBFA2T2O43439 604 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 IL18RAPO95256 599 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 EOMESO95936 686 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 TPM3P06753 285 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 PFKMP08237 780 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 CCL23P55773 120 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 CBLBQ13191 982 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 SLC10A6Q3KNW5 377 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 HSP90AA4PQ58FG1 418 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 TBCELQ5QJ74 424 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 ZBTB41Q5SVQ8 909 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 C1orf220Q5T0J3 134 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 ALKBH2Q6NS38 261 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 THNSL1Q8IYQ7 743 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 HACE1Q8IYU2 909 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 RPUSD2Q8IZ73 545 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms