RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 GUCY2FP51841 1108 aa25.04■■□□□ 1.6
LIMD2-204ENST00000578297 PSMD5Q16401 504 aa25.04■■□□□ 1.6
LIMD2-204ENST00000578297 C12orf56Q8IXR9 622 aa25.04■■□□□ 1.6
LIMD2-204ENST00000578297 EFCAB13Q8IY85 973 aa25.04■■□□□ 1.6
LIMD2-204ENST00000578297 FBXL18Q96ME1 805 aa25.04■■□□□ 1.6
LIMD2-204ENST00000578297 CLSTN3Q9BQT9 956 aa25.04■■□□□ 1.6
LIMD2-204ENST00000578297 ANO9A1A5B4 782 aa25.03■■□□□ 1.6
LIMD2-204ENST00000578297 ZNF233A6NK53 670 aa25.03■■□□□ 1.6
LIMD2-204ENST00000578297 CLIC2O15247 247 aa25.03■■□□□ 1.6
LIMD2-204ENST00000578297 GLUD1P00367 558 aa25.03■■□□□ 1.6
LIMD2-204ENST00000578297 RPL17P18621 184 aaKnown RBP25.03■■□□□ 1.6
LIMD2-204ENST00000578297 MCM4P33991 863 aa25.03■■□□□ 1.6
LIMD2-204ENST00000578297 WNT7BP56706 349 aa25.03■■□□□ 1.6
LIMD2-204ENST00000578297 C9orf57Q5W0N0 161 aa25.03■■□□□ 1.6
LIMD2-204ENST00000578297 ANKS3Q6ZW76 656 aa25.03■■□□□ 1.6
LIMD2-204ENST00000578297 GOLGA5Q8TBA6 731 aa25.03■■□□□ 1.6
LIMD2-204ENST00000578297 NOC3LQ8WTT2 800 aaKnown RBP25.03■■□□□ 1.6
LIMD2-204ENST00000578297 UHRF1Q96T88 793 aaPredicted RBP25.03■■□□□ 1.6
LIMD2-204ENST00000578297 DPP7Q9UHL4 492 aa25.03■■□□□ 1.6
LIMD2-204ENST00000578297 PIRO00625 290 aa25.02■■□□□ 1.6
LIMD2-204ENST00000578297 PAX3P23760 479 aa25.02■■□□□ 1.6
LIMD2-204ENST00000578297 AARSP49588 968 aaKnown RBP eCLIP25.02■■□□□ 1.6
LIMD2-204ENST00000578297 PNOCQ13519 176 aa25.02■■□□□ 1.6
LIMD2-204ENST00000578297 CBWD2Q8IUF1 395 aa25.02■■□□□ 1.6
LIMD2-204ENST00000578297 KCTD10Q9H3F6 313 aa25.02■■□□□ 1.6
LIMD2-204ENST00000578297 DPP3Q9NY33 737 aa25.02■■□□□ 1.6
LIMD2-204ENST00000578297 MTRRQ9UBK8 725 aa25.02■■□□□ 1.6
LIMD2-204ENST00000578297 USP15Q9Y4E8 981 aaPredicted RBP25.02■■□□□ 1.6
LIMD2-204ENST00000578297 BACE2Q9Y5Z0 518 aa25.02■■□□□ 1.6
LIMD2-204ENST00000578297 PLXNA3P51805 1871 aa25.01■■□□□ 1.59
LIMD2-204ENST00000578297 C5orf42Q9H799 3197 aa25.01■■□□□ 1.59
LIMD2-204ENST00000578297 M0QZQ0 153 aa25.01■■□□□ 1.59
LIMD2-204ENST00000578297 TGM5O43548 720 aa25.01■■□□□ 1.59
LIMD2-204ENST00000578297 GADD45BO75293 160 aaPredicted RBP25.01■■□□□ 1.59
LIMD2-204ENST00000578297 KIF20AO95235 890 aa25.01■■□□□ 1.59
LIMD2-204ENST00000578297 ITIH3Q06033 890 aa25.01■■□□□ 1.59
LIMD2-204ENST00000578297 LILRA6Q6PI73 481 aa25.01■■□□□ 1.59
LIMD2-204ENST00000578297 PALB2Q86YC2 1186 aa25.01■■□□□ 1.59
LIMD2-204ENST00000578297 GLYCTKQ8IVS8 523 aa25.01■■□□□ 1.59
LIMD2-204ENST00000578297 ELOA2Q8IYF1 753 aaPredicted RBP25.01■■□□□ 1.59
LIMD2-204ENST00000578297 XXYLT1Q8NBI6 393 aa25.01■■□□□ 1.59
LIMD2-204ENST00000578297 HDAC7Q8WUI4 952 aa25.01■■□□□ 1.59
LIMD2-204ENST00000578297 CACTINQ8WUQ7 758 aaKnown RBP25.01■■□□□ 1.59
LIMD2-204ENST00000578297 TMEM174Q8WUU8 243 aa25.01■■□□□ 1.59
LIMD2-204ENST00000578297 SUSD6Q92537 303 aa25.01■■□□□ 1.59
LIMD2-204ENST00000578297 ADAM7Q9H2U9 754 aa25.01■■□□□ 1.59
LIMD2-204ENST00000578297 PDE11AQ9HCR9 933 aa25.01■■□□□ 1.59
LIMD2-204ENST00000578297 PRKAG3Q9UGI9 489 aa25.01■■□□□ 1.59
LIMD2-204ENST00000578297 HOOK1Q9UJC3 728 aaKnown RBP25.01■■□□□ 1.59
LIMD2-204ENST00000578297 PCDHB8Q9UN66 801 aa25.01■■□□□ 1.59
LIMD2-204ENST00000578297 DLL1O00548 723 aa25■■□□□ 1.59
LIMD2-204ENST00000578297 PDXKO00764 312 aa25■■□□□ 1.59
LIMD2-204ENST00000578297 PPEF2O14830 753 aa25■■□□□ 1.59
LIMD2-204ENST00000578297 CYP2J2P51589 502 aa25■■□□□ 1.59
LIMD2-204ENST00000578297 LILRA4P59901 499 aa25■■□□□ 1.59
LIMD2-204ENST00000578297 MRPL58Q14197 206 aaKnown RBP25■■□□□ 1.59
LIMD2-204ENST00000578297 SURF1Q15526 300 aa25■■□□□ 1.59
LIMD2-204ENST00000578297 SNRNP35Q16560 246 aaKnown RBP25■■□□□ 1.59
LIMD2-204ENST00000578297 VARS2Q5ST30 1063 aaKnown RBP25■■□□□ 1.59
LIMD2-204ENST00000578297 ELMSAN1Q6PJG2 1045 aa25■■□□□ 1.59
LIMD2-204ENST00000578297 APPL2Q8NEU8 664 aa25■■□□□ 1.59
LIMD2-204ENST00000578297 SFXN1Q9H9B4 322 aa25■■□□□ 1.59
LIMD2-204ENST00000578297 MAN1C1Q9NR34 630 aa25■■□□□ 1.59
LIMD2-204ENST00000578297 TFAMQ00059 246 aaKnown RBP24.99■■□□□ 1.59
LIMD2-204ENST00000578297 CES5AQ6NT32 575 aa24.99■■□□□ 1.59
LIMD2-204ENST00000578297 C12orf76Q8N812 135 aaPredicted RBP24.99■■□□□ 1.59
LIMD2-204ENST00000578297 SPATA20Q8TB22 786 aa24.99■■□□□ 1.59
LIMD2-204ENST00000578297 NECAB3Q96P71 396 aaPredicted RBP24.99■■□□□ 1.59
LIMD2-204ENST00000578297 GSDMAQ96QA5 445 aa24.99■■□□□ 1.59
LIMD2-204ENST00000578297 APOL5Q9BWW9 433 aa24.99■■□□□ 1.59
LIMD2-204ENST00000578297 PLEKHA4Q9H4M7 779 aa24.99■■□□□ 1.59
LIMD2-204ENST00000578297 RMND1Q9NWS8 449 aa24.99■■□□□ 1.59
LIMD2-204ENST00000578297 MUC3AQ02505 3323 aa24.99■■□□□ 1.59
LIMD2-204ENST00000578297 H7C4K7 107 aa24.98■■□□□ 1.59
LIMD2-204ENST00000578297 ADAM12O43184 909 aa24.98■■□□□ 1.59
LIMD2-204ENST00000578297 TBC1D4O60343 1298 aa24.98■■□□□ 1.59
LIMD2-204ENST00000578297 SMC2O95347 1197 aa24.98■■□□□ 1.59
LIMD2-204ENST00000578297 OR1D2P34982 312 aa24.98■■□□□ 1.59
LIMD2-204ENST00000578297 RAB33AQ14088 237 aa24.98■■□□□ 1.59
LIMD2-204ENST00000578297 RARS2Q5T160 578 aaKnown RBP24.98■■□□□ 1.59
LIMD2-204ENST00000578297 RSPO2Q6UXX9 243 aaPredicted RBP24.98■■□□□ 1.59
LIMD2-204ENST00000578297 DSTYKQ6XUX3 929 aa24.98■■□□□ 1.59
LIMD2-204ENST00000578297 SLC9A9Q8IVB4 645 aa24.98■■□□□ 1.59
LIMD2-204ENST00000578297 GUF1Q8N442 669 aaKnown RBP24.98■■□□□ 1.59
LIMD2-204ENST00000578297 RDH13Q8NBN7 331 aa24.98■■□□□ 1.59
LIMD2-204ENST00000578297 DMAC2Q9NW81 257 aa24.98■■□□□ 1.59
LIMD2-204ENST00000578297 MTCL1Q9Y4B5 1905 aaKnown RBP24.98■■□□□ 1.59
LIMD2-204ENST00000578297 SPDYE4A6NLX3 237 aa24.97■■□□□ 1.59
LIMD2-204ENST00000578297 TULP1O00294 542 aaPredicted RBP24.97■■□□□ 1.59
LIMD2-204ENST00000578297 SPTLC1O15269 473 aa24.97■■□□□ 1.59
LIMD2-204ENST00000578297 KINO60870 393 aaKnown RBP24.97■■□□□ 1.59
LIMD2-204ENST00000578297 SPATA31D3P0C874 917 aa24.97■■□□□ 1.59
LIMD2-204ENST00000578297 UBE2HP62256 183 aa24.97■■□□□ 1.59
LIMD2-204ENST00000578297 CBX2Q14781 532 aaPredicted RBP24.97■■□□□ 1.59
LIMD2-204ENST00000578297 SLC8B1Q6J4K2 584 aa24.97■■□□□ 1.59
LIMD2-204ENST00000578297 SPATA31D4Q6ZUB0 917 aa24.97■■□□□ 1.59
LIMD2-204ENST00000578297 ADHFE1Q8IWW8 467 aa24.97■■□□□ 1.59
LIMD2-204ENST00000578297 C1orf127Q8N9H9 656 aa24.97■■□□□ 1.59
LIMD2-204ENST00000578297 TRAF3IP3Q9Y228 551 aa24.97■■□□□ 1.59
LIMD2-204ENST00000578297 PCDHA5Q9Y5H7 936 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms