RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 LRRC43Q8N309 656 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 PLEKHO2Q8TD55 490 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 RNPC3Q96LT9 517 aaKnown RBP12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 ZFP42Q96MM3 310 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 UROC1Q96N76 676 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 PPP1R10Q96QC0 940 aaKnown RBP12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 UBE2OQ9C0C9 1292 aaKnown RBP12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 NDST4Q9H3R1 872 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 RNF19AQ9NV58 838 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 ITGA11Q9UKX5 1188 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 INPP5FQ9Y2H2 1132 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 R3HCC1Q9Y3T6 440 aaKnown RBP12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 PDE4DIPQ5VU43 2346 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 GTPBP10A4D1E9 387 aaKnown RBP12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 GOLGA6L3A6NEY3 463 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 TBKBP1A7MCY6 615 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 TULP1O00294 542 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 PES1O00541 588 aaKnown RBP12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 UPP2O95045 317 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 GJB5O95377 273 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 NFICP08651 508 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 ATP2A2P16615 1042 aaKnown RBP12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 PAX3P23760 479 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 FMO5P49326 533 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 WNT7BP56706 349 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 DLG4P78352 724 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 FANCCQ00597 558 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 RNASELQ05823 741 aaKnown RBP12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 TUSC3Q13454 348 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 ZACNQ401N2 412 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 C1orf220Q5T0J3 134 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 SARM1Q6SZW1 724 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 HERC6Q8IVU3 1022 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 GSTCDQ8NEC7 633 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 ZNF516Q92618 1163 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 ZNF689Q96CS4 500 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 ZMAT2Q96NC0 199 aaKnown RBP12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 CASD1Q96PB1 797 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 YME1L1Q96TA2 773 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 MTMR12Q9C0I1 747 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 TAB2Q9NYJ8 693 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 CXXC1Q9P0U4 656 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 INSL6Q9Y581 213 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 PTPRJQ12913 1337 aa12.08□□□□□ -0.48
TRAPPC8-204ENST00000578252 LGALS16A8MUM7 142 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 PHACTR2O75167 634 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 POMCP01189 267 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 C4BPAP04003 597 aaKnown RBP12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 LRPAP1P30533 357 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 RPL9P32969 192 aaKnown RBP12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 GCLMP48507 274 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 COPS2P61201 443 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 HTRA4P83105 476 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 MYL7Q01449 175 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 PPP3CAQ08209 521 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 BIRC3Q13489 604 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 NAB2Q15742 525 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 MIIPQ5JXC2 388 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 GLRA4Q5JXX5 417 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 C15orf39Q6ZRI6 1047 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 SV2AQ7L0J3 742 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 APTXQ7Z2E3 356 aaKnown RBP12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 TRAPPC11Q7Z392 1133 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 FBXL13Q8NEE6 735 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 OR5B17Q8NGF7 314 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 TAF4BQ92750 862 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 FAM193BQ96PV7 902 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 POP1Q99575 1024 aaKnown RBP12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 PRR14Q9BWN1 585 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 VPS16Q9H269 839 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 RC3H2Q9HBD1 1191 aaKnown RBP12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 TBC1D13Q9NVG8 400 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 DPP3Q9NY33 737 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 COQ4Q9Y3A0 265 aa12.07□□□□□ -0.48
TRAPPC8-204ENST00000578252 TNRC18O15417 2968 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 A0A1B0GTH6 734 aa12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 ATICP31939 592 aa12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 PNPLA4P41247 253 aa12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 PIK3CAP42336 1068 aa12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 UBASH3AP57075 661 aa12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 RBP5P82980 135 aa12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 DSC1Q08554 894 aa12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 TRPC3Q13507 836 aa12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 BTG3Q14201 252 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 SHHQ15465 462 aa12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 CBWD6Q4V339 395 aa12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 CBWD3Q5JTY5 395 aa12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 CBWD5Q5RIA9 395 aa12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 C9orf50Q5SZB4 431 aa12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 TDRD10Q5VZ19 366 aaKnown RBP12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 LMBRD2Q68DH5 695 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 FAM117BQ6P1L5 589 aa12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 GBP6Q6ZN66 633 aa12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 LRRC52Q8N7C0 313 aa12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 C1orf127Q8N9H9 656 aa12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 CCDC150Q8NCX0 1101 aa12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 C18orf25Q96B23 403 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 ZNF560Q96MR9 790 aa12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 RAD9AQ99638 391 aa12.06□□□□□ -0.48
TRAPPC8-204ENST00000578252 TMEM175Q9BSA9 504 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms