RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 MBD3O95983 291 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 TNNC2P02585 160 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 ADH1AP07327 375 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 TMEM191BP0C7N4 346 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 MCM4P33991 863 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 TFAMQ00059 246 aaKnown RBP15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 LRRC63Q05C16 580 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 ADAM9Q13443 819 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 RBM23Q86U06 439 aaKnown RBP15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 RDH13Q8NBN7 331 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 C3orf58Q8NDZ4 430 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 TMC2Q8TDI7 906 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 HASPINQ8TF76 798 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 ATXN2LQ8WWM7 1075 aaKnown RBP15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 RIN2Q8WYP3 895 aaPredicted RBP15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 CASP10Q92851 521 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 ERCC4Q92889 916 aaPredicted RBP15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 ZNF560Q96MR9 790 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 KLHL5Q96PQ7 755 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 MKNK1Q9BUB5 465 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 OXCT2Q9BYC2 517 aaPredicted RBP15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 NUP62CLQ9H1M0 184 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 IGFLR1Q9H665 355 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 UBE2ZQ9H832 354 aaPredicted RBP15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 THEGQ9P2T0 379 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 DPP7Q9UHL4 492 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 ITGA11Q9UKX5 1188 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 PCDHB8Q9UN66 801 aa15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 R3HCC1Q9Y3T6 440 aaKnown RBP15.02■□□□□ -0
SNORD3B-1-201ENST00000577988 VWA8A3KMH1 1905 aa15.02□□□□□ -0.01
SNORD3B-1-201ENST00000577988 MTCL1Q9Y4B5 1905 aaKnown RBP15.02□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CDH23Q9H251 3354 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 H7C4K7 107 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 IKBKBO14920 756 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 PER2O15055 1255 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CETN3O15182 167 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CSPG5O95196 566 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CNPP09543 421 aaKnown RBP15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 TNNI1P19237 187 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 NR2F2P24468 414 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CCNE1P24864 410 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 KLRC2P26717 231 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CA8P35219 290 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 PSMC2P35998 433 aaKnown RBP15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 BRCC3P46736 316 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 TAF6P49848 677 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 LILRA4P59901 499 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 MCCD1P59942 119 aaPredicted RBP15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 RBP5P82980 135 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 FKBP3Q00688 224 aaKnown RBP15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 KCNC3Q14003 757 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CAMK4Q16566 473 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 PUS10Q3MIT2 529 aaKnown RBP15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 ELMSAN1Q6PJG2 1045 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CEP57Q86XR8 500 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 SMYD4Q8IYR2 804 aaPredicted RBP15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 LRRC52Q8N7C0 313 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 AUTS2Q8WXX7 1259 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CGRRF1Q99675 332 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CLDND1Q9NY35 253 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 PCDHGC5Q9Y5F6 944 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 BACE2Q9Y5Z0 518 aa15.01□□□□□ -0.01
SNORD3B-1-201ENST00000577988 BICDL2A1A5D9 508 aa15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 C2CD2LO14523 706 aa15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 HOXB8P17481 243 aaPredicted RBP15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 TYMPP19971 482 aa15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 NDUFV1P49821 464 aa15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 WNT7BP56706 349 aa15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CLDN10P78369 228 aa15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 MRPL58Q14197 206 aaKnown RBP15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 PSMD5Q16401 504 aa15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 SV2CQ496J9 727 aa15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 RTP2Q5QGT7 225 aa15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CEP135Q66GS9 1140 aa15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 DSTYKQ6XUX3 929 aa15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 INTS8Q75QN2 995 aaKnown RBP15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CSGALNACT2Q8N6G5 542 aa15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 C1orf127Q8N9H9 656 aa15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 LNX1Q8TBB1 728 aaPredicted RBP15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 PARD3BQ8TEW8 1205 aa15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 SLC22A17Q8WUG5 538 aa15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 HDAC7Q8WUI4 952 aa15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 DSEQ9UL01 958 aa15□□□□□ -0.01
SNORD3B-1-201ENST00000577988 PPP1R3GB7ZBB8 358 aa14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 TEX28O15482 410 aa14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 OAZ2O95190 189 aa14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 DLATP10515 647 aaKnown RBP14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 KRT13P13646 458 aa14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 TKTP29401 623 aaKnown RBP14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 LTBRP36941 435 aa14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CASP4P49662 377 aa14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 GUCY2FP51841 1108 aa14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 MRPS5P82675 430 aaKnown RBP14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 LEXMQ3ZCV2 418 aa14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 ANKRD40Q6AI12 368 aa14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 RTL10Q7L3V2 364 aa14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 ZC3H3Q8IXZ2 948 aaKnown RBP14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 MLKLQ8NB16 471 aa14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 SPATA18Q8TC71 538 aa14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CCDC127Q96BQ5 260 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms