RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 TMEM174Q8WUU8 243 aa20.95■□□□□ 0.94
SS18-208ENST00000577751 SUSD3Q96L08 255 aa20.95■□□□□ 0.94
SS18-208ENST00000577751 COL25A1Q9BXS0 654 aaPredicted RBP20.95■□□□□ 0.94
SS18-208ENST00000577751 KCTD10Q9H3F6 313 aa20.95■□□□□ 0.94
SS18-208ENST00000577751 NUB1Q9Y5A7 615 aa20.95■□□□□ 0.94
SS18-208ENST00000577751 MTCL1Q9Y4B5 1905 aaKnown RBP20.95■□□□□ 0.94
SS18-208ENST00000577751 ANO9A1A5B4 782 aa20.94■□□□□ 0.94
SS18-208ENST00000577751 PIRO00625 290 aa20.94■□□□□ 0.94
SS18-208ENST00000577751 SYN3O14994 580 aa20.94■□□□□ 0.94
SS18-208ENST00000577751 CLIC2O15247 247 aa20.94■□□□□ 0.94
SS18-208ENST00000577751 TKTP29401 623 aaKnown RBP20.94■□□□□ 0.94
SS18-208ENST00000577751 PNOCQ13519 176 aa20.94■□□□□ 0.94
SS18-208ENST00000577751 SMAD2Q15796 467 aaKnown RBP20.94■□□□□ 0.94
SS18-208ENST00000577751 PSMD5Q16401 504 aa20.94■□□□□ 0.94
SS18-208ENST00000577751 C9orf57Q5W0N0 161 aa20.94■□□□□ 0.94
SS18-208ENST00000577751 SPATA20Q8TB22 786 aa20.94■□□□□ 0.94
SS18-208ENST00000577751 ADAMTS19Q8TE59 1207 aa20.94■□□□□ 0.94
SS18-208ENST00000577751 CLSTN3Q9BQT9 956 aa20.94■□□□□ 0.94
SS18-208ENST00000577751 DZANK1Q9NVP4 752 aa20.94■□□□□ 0.94
SS18-208ENST00000577751 FAM50BQ9Y247 325 aa20.94■□□□□ 0.94
SS18-208ENST00000577751 ZNF233A6NK53 670 aa20.93■□□□□ 0.94
SS18-208ENST00000577751 M0QZQ0 153 aa20.93■□□□□ 0.94
SS18-208ENST00000577751 PPEF2O14830 753 aa20.93■□□□□ 0.94
SS18-208ENST00000577751 RPL17P18621 184 aaKnown RBP20.93■□□□□ 0.94
SS18-208ENST00000577751 MCM4P33991 863 aa20.93■□□□□ 0.94
SS18-208ENST00000577751 MRPL58Q14197 206 aaKnown RBP20.93■□□□□ 0.94
SS18-208ENST00000577751 LILRA6Q6PI73 481 aa20.93■□□□□ 0.94
SS18-208ENST00000577751 ANKS3Q6ZW76 656 aa20.93■□□□□ 0.94
SS18-208ENST00000577751 CBWD2Q8IUF1 395 aa20.93■□□□□ 0.94
SS18-208ENST00000577751 XXYLT1Q8NBI6 393 aa20.93■□□□□ 0.94
SS18-208ENST00000577751 PDE11AQ9HCR9 933 aa20.93■□□□□ 0.94
SS18-208ENST00000577751 DPP3Q9NY33 737 aa20.93■□□□□ 0.94
SS18-208ENST00000577751 MTRRQ9UBK8 725 aa20.93■□□□□ 0.94
SS18-208ENST00000577751 BACE2Q9Y5Z0 518 aa20.93■□□□□ 0.94
SS18-208ENST00000577751 SCN1AP35498 2009 aa20.92■□□□□ 0.94
SS18-208ENST00000577751 PDXKO00764 312 aa20.92■□□□□ 0.94
SS18-208ENST00000577751 GLUD1P00367 558 aa20.92■□□□□ 0.94
SS18-208ENST00000577751 PAX3P23760 479 aa20.92■□□□□ 0.94
SS18-208ENST00000577751 LILRA4P59901 499 aa20.92■□□□□ 0.94
SS18-208ENST00000577751 GOLGA5Q8TBA6 731 aa20.92■□□□□ 0.94
SS18-208ENST00000577751 SUSD6Q92537 303 aa20.92■□□□□ 0.94
SS18-208ENST00000577751 DMAC2Q9NW81 257 aa20.92■□□□□ 0.94
SS18-208ENST00000577751 PCDHB8Q9UN66 801 aa20.92■□□□□ 0.94
SS18-208ENST00000577751 TGM5O43548 720 aa20.91■□□□□ 0.94
SS18-208ENST00000577751 TBC1D4O60343 1298 aa20.91■□□□□ 0.94
SS18-208ENST00000577751 KIF20AO95235 890 aa20.91■□□□□ 0.94
SS18-208ENST00000577751 SNRNP35Q16560 246 aaKnown RBP20.91■□□□□ 0.94
SS18-208ENST00000577751 VARS2Q5ST30 1063 aaKnown RBP20.91■□□□□ 0.94
SS18-208ENST00000577751 RSPO2Q6UXX9 243 aaPredicted RBP20.91■□□□□ 0.94
SS18-208ENST00000577751 CLEC17AQ6ZS10 378 aa20.91■□□□□ 0.94
SS18-208ENST00000577751 PALB2Q86YC2 1186 aa20.91■□□□□ 0.94
SS18-208ENST00000577751 SLC9A9Q8IVB4 645 aa20.91■□□□□ 0.94
SS18-208ENST00000577751 GUF1Q8N442 669 aaKnown RBP20.91■□□□□ 0.94
SS18-208ENST00000577751 NOC3LQ8WTT2 800 aaKnown RBP20.91■□□□□ 0.94
SS18-208ENST00000577751 HDAC7Q8WUI4 952 aa20.91■□□□□ 0.94
SS18-208ENST00000577751 CACTINQ8WUQ7 758 aaKnown RBP20.91■□□□□ 0.94
SS18-208ENST00000577751 IPO9Q96P70 1041 aaKnown RBP20.91■□□□□ 0.94
SS18-208ENST00000577751 GSDMAQ96QA5 445 aa20.91■□□□□ 0.94
SS18-208ENST00000577751 ADAM7Q9H2U9 754 aa20.91■□□□□ 0.94
SS18-208ENST00000577751 TRAF3IP3Q9Y228 551 aa20.91■□□□□ 0.94
SS18-208ENST00000577751 USP15Q9Y4E8 981 aaPredicted RBP20.91■□□□□ 0.94
SS18-208ENST00000577751 PCDHA5Q9Y5H7 936 aa20.91■□□□□ 0.94
SS18-208ENST00000577751 SPTLC1O15269 473 aa20.9■□□□□ 0.94
SS18-208ENST00000577751 ADAM12O43184 909 aa20.9■□□□□ 0.94
SS18-208ENST00000577751 PAPLNO95428 1278 aa20.9■□□□□ 0.94
SS18-208ENST00000577751 CYP2J2P51589 502 aa20.9■□□□□ 0.94
SS18-208ENST00000577751 UBE2HP62256 183 aa20.9■□□□□ 0.94
SS18-208ENST00000577751 ITIH3Q06033 890 aa20.9■□□□□ 0.94
SS18-208ENST00000577751 RAB33AQ14088 237 aa20.9■□□□□ 0.94
SS18-208ENST00000577751 SURF1Q15526 300 aa20.9■□□□□ 0.94
SS18-208ENST00000577751 GLYCTKQ8IVS8 523 aa20.9■□□□□ 0.94
SS18-208ENST00000577751 RDH13Q8NBN7 331 aa20.9■□□□□ 0.94
SS18-208ENST00000577751 CXorf38Q8TB03 319 aa20.9■□□□□ 0.94
SS18-208ENST00000577751 UHRF1Q96T88 793 aaPredicted RBP20.9■□□□□ 0.94
SS18-208ENST00000577751 PRKAG3Q9UGI9 489 aa20.9■□□□□ 0.94
SS18-208ENST00000577751 DPP7Q9UHL4 492 aa20.9■□□□□ 0.94
SS18-208ENST00000577751 HOOK1Q9UJC3 728 aaKnown RBP20.9■□□□□ 0.94
SS18-208ENST00000577751 KINO60870 393 aaKnown RBP20.89■□□□□ 0.93
SS18-208ENST00000577751 TFAMQ00059 246 aaKnown RBP20.89■□□□□ 0.93
SS18-208ENST00000577751 MYBPC2Q14324 1141 aa20.89■□□□□ 0.93
SS18-208ENST00000577751 PSMD6Q15008 389 aa20.89■□□□□ 0.93
SS18-208ENST00000577751 SLC8B1Q6J4K2 584 aa20.89■□□□□ 0.93
SS18-208ENST00000577751 C12orf76Q8N812 135 aaPredicted RBP20.89■□□□□ 0.93
SS18-208ENST00000577751 C1orf127Q8N9H9 656 aa20.89■□□□□ 0.93
SS18-208ENST00000577751 APPL2Q8NEU8 664 aa20.89■□□□□ 0.93
SS18-208ENST00000577751 BORCS6Q96GS4 357 aa20.89■□□□□ 0.93
SS18-208ENST00000577751 MFSD14AQ96MC6 490 aa20.89■□□□□ 0.93
SS18-208ENST00000577751 NECAB3Q96P71 396 aaPredicted RBP20.89■□□□□ 0.93
SS18-208ENST00000577751 APOL5Q9BWW9 433 aa20.89■□□□□ 0.93
SS18-208ENST00000577751 PLEKHA4Q9H4M7 779 aa20.89■□□□□ 0.93
SS18-208ENST00000577751 SFXN1Q9H9B4 322 aa20.89■□□□□ 0.93
SS18-208ENST00000577751 MAN1C1Q9NR34 630 aa20.89■□□□□ 0.93
SS18-208ENST00000577751 TSHZ2Q9NRE2 1034 aa20.89■□□□□ 0.93
SS18-208ENST00000577751 INTS13Q9NVM9 706 aa20.89■□□□□ 0.93
SS18-208ENST00000577751 RMND1Q9NWS8 449 aa20.89■□□□□ 0.93
SS18-208ENST00000577751 PTPRJQ12913 1337 aa20.88■□□□□ 0.93
SS18-208ENST00000577751 OAZ2O95190 189 aa20.88■□□□□ 0.93
SS18-208ENST00000577751 SMC2O95347 1197 aa20.88■□□□□ 0.93
SS18-208ENST00000577751 OR1D2P34982 312 aa20.88■□□□□ 0.93
SS18-208ENST00000577751 CYP24A1Q07973 514 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms