RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 SMARCE1Q969G3 411 aa17■□□□□ 0.31
NCBP3-207ENST00000577169 SUSD3Q96L08 255 aa17■□□□□ 0.31
NCBP3-207ENST00000577169 GSDMAQ96QA5 445 aa17■□□□□ 0.31
NCBP3-207ENST00000577169 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17■□□□□ 0.31
NCBP3-207ENST00000577169 COL6A3P12111 3177 aa17■□□□□ 0.31
NCBP3-207ENST00000577169 TCF20Q9UGU0 1960 aaKnown RBP17■□□□□ 0.31
NCBP3-207ENST00000577169 ANO9A1A5B4 782 aa16.99■□□□□ 0.31
NCBP3-207ENST00000577169 GRXCR2A6NFK2 248 aa16.99■□□□□ 0.31
NCBP3-207ENST00000577169 PIRO00625 290 aa16.99■□□□□ 0.31
NCBP3-207ENST00000577169 PDXKO00764 312 aa16.99■□□□□ 0.31
NCBP3-207ENST00000577169 KIF20AO95235 890 aa16.99■□□□□ 0.31
NCBP3-207ENST00000577169 SRGAP2BP0DMP2 458 aa16.99■□□□□ 0.31
NCBP3-207ENST00000577169 CLCN4P51793 760 aa16.99■□□□□ 0.31
NCBP3-207ENST00000577169 TFAMQ00059 246 aaKnown RBP16.99■□□□□ 0.31
NCBP3-207ENST00000577169 PSMD5Q16401 504 aa16.99■□□□□ 0.31
NCBP3-207ENST00000577169 PTCRAQ6ISU1 281 aaPredicted RBP16.99■□□□□ 0.31
NCBP3-207ENST00000577169 SYCE2Q6PIF2 218 aa16.99■□□□□ 0.31
NCBP3-207ENST00000577169 GUF1Q8N442 669 aaKnown RBP16.99■□□□□ 0.31
NCBP3-207ENST00000577169 SPATA20Q8TB22 786 aa16.99■□□□□ 0.31
NCBP3-207ENST00000577169 GOLGA5Q8TBA6 731 aa16.99■□□□□ 0.31
NCBP3-207ENST00000577169 CACTINQ8WUQ7 758 aaKnown RBP16.99■□□□□ 0.31
NCBP3-207ENST00000577169 CLSTN3Q9BQT9 956 aa16.99■□□□□ 0.31
NCBP3-207ENST00000577169 DMAC2Q9NW81 257 aa16.99■□□□□ 0.31
NCBP3-207ENST00000577169 RMND1Q9NWS8 449 aa16.99■□□□□ 0.31
NCBP3-207ENST00000577169 VWA8A3KMH1 1905 aa16.99■□□□□ 0.31
NCBP3-207ENST00000577169 MBTPS2O43462 519 aa16.98■□□□□ 0.31
NCBP3-207ENST00000577169 EXOC3O60645 756 aa16.98■□□□□ 0.31
NCBP3-207ENST00000577169 ADH1AP07327 375 aa16.98■□□□□ 0.31
NCBP3-207ENST00000577169 SPATA31D3P0C874 917 aa16.98■□□□□ 0.31
NCBP3-207ENST00000577169 LILRA4P59901 499 aa16.98■□□□□ 0.31
NCBP3-207ENST00000577169 SURF1Q15526 300 aa16.98■□□□□ 0.31
NCBP3-207ENST00000577169 SNRNP35Q16560 246 aaKnown RBP16.98■□□□□ 0.31
NCBP3-207ENST00000577169 PUS10Q3MIT2 529 aaKnown RBP16.98■□□□□ 0.31
NCBP3-207ENST00000577169 LMBRD2Q68DH5 695 aaPredicted RBP16.98■□□□□ 0.31
NCBP3-207ENST00000577169 SCARA3Q6AZY7 606 aa16.98■□□□□ 0.31
NCBP3-207ENST00000577169 ISM2Q6H9L7 571 aa16.98■□□□□ 0.31
NCBP3-207ENST00000577169 PDXDC1Q6P996 788 aa16.98■□□□□ 0.31
NCBP3-207ENST00000577169 DSTYKQ6XUX3 929 aa16.98■□□□□ 0.31
NCBP3-207ENST00000577169 SPATA31D4Q6ZUB0 917 aa16.98■□□□□ 0.31
NCBP3-207ENST00000577169 SMYD4Q8IYR2 804 aaPredicted RBP16.98■□□□□ 0.31
NCBP3-207ENST00000577169 FAM84AQ96KN4 292 aa16.98■□□□□ 0.31
NCBP3-207ENST00000577169 APOL5Q9BWW9 433 aa16.98■□□□□ 0.31
NCBP3-207ENST00000577169 S1PR5Q9H228 398 aa16.98■□□□□ 0.31
NCBP3-207ENST00000577169 SYN3O14994 580 aa16.97■□□□□ 0.31
NCBP3-207ENST00000577169 SPTLC1O15269 473 aa16.97■□□□□ 0.31
NCBP3-207ENST00000577169 ADAM12O43184 909 aa16.97■□□□□ 0.31
NCBP3-207ENST00000577169 CALUO43852 315 aaPredicted RBP16.97■□□□□ 0.31
NCBP3-207ENST00000577169 IL9P15248 144 aa16.97■□□□□ 0.31
NCBP3-207ENST00000577169 HOXB8P17481 243 aaPredicted RBP16.97■□□□□ 0.31
NCBP3-207ENST00000577169 PRCPP42785 496 aa16.97■□□□□ 0.31
NCBP3-207ENST00000577169 CREMQ03060 361 aa16.97■□□□□ 0.31
NCBP3-207ENST00000577169 CYP24A1Q07973 514 aa16.97■□□□□ 0.31
NCBP3-207ENST00000577169 MRPL58Q14197 206 aaKnown RBP16.97■□□□□ 0.31
NCBP3-207ENST00000577169 VARS2Q5ST30 1063 aaKnown RBP16.97■□□□□ 0.31
NCBP3-207ENST00000577169 ZNF658Q5TYW1 1059 aaPredicted RBP16.97■□□□□ 0.31
NCBP3-207ENST00000577169 LILRA6Q6PI73 481 aa16.97■□□□□ 0.31
NCBP3-207ENST00000577169 ANKS3Q6ZW76 656 aa16.97■□□□□ 0.31
NCBP3-207ENST00000577169 SLC9A9Q8IVB4 645 aa16.97■□□□□ 0.31
NCBP3-207ENST00000577169 CSGALNACT2Q8N6G5 542 aa16.97■□□□□ 0.31
NCBP3-207ENST00000577169 C12orf76Q8N812 135 aaPredicted RBP16.97■□□□□ 0.31
NCBP3-207ENST00000577169 MFSD14AQ96MC6 490 aa16.97■□□□□ 0.31
NCBP3-207ENST00000577169 POP1Q99575 1024 aaKnown RBP16.97■□□□□ 0.31
NCBP3-207ENST00000577169 INTS13Q9NVM9 706 aa16.97■□□□□ 0.31
NCBP3-207ENST00000577169 PCDHB8Q9UN66 801 aa16.97■□□□□ 0.31
NCBP3-207ENST00000577169 AGAP1Q9UPQ3 857 aa16.97■□□□□ 0.31
NCBP3-207ENST00000577169 TRAF3IP3Q9Y228 551 aa16.97■□□□□ 0.31
NCBP3-207ENST00000577169 TIMM13Q9Y5L4 95 aaPredicted RBP16.97■□□□□ 0.31
NCBP3-207ENST00000577169 BRWD1Q9NSI6 2320 aa16.96■□□□□ 0.31
NCBP3-207ENST00000577169 M0QZQ0 153 aa16.96■□□□□ 0.31
NCBP3-207ENST00000577169 TGM5O43548 720 aa16.96■□□□□ 0.31
NCBP3-207ENST00000577169 NR3C1P04150 777 aa16.96■□□□□ 0.31
NCBP3-207ENST00000577169 OR1D2P34982 312 aa16.96■□□□□ 0.31
NCBP3-207ENST00000577169 AARSP49588 968 aaKnown RBP eCLIP16.96■□□□□ 0.31
NCBP3-207ENST00000577169 SMAD4Q13485 552 aaKnown RBP16.96■□□□□ 0.31
NCBP3-207ENST00000577169 PSMD6Q15008 389 aa16.96■□□□□ 0.31
NCBP3-207ENST00000577169 RSPO2Q6UXX9 243 aaPredicted RBP16.96■□□□□ 0.31
NCBP3-207ENST00000577169 C1orf127Q8N9H9 656 aa16.96■□□□□ 0.31
NCBP3-207ENST00000577169 SMRP1Q8NCR6 262 aa16.96■□□□□ 0.31
NCBP3-207ENST00000577169 OR5B17Q8NGF7 314 aa16.96■□□□□ 0.31
NCBP3-207ENST00000577169 TMEM174Q8WUU8 243 aa16.96■□□□□ 0.31
NCBP3-207ENST00000577169 CCDC127Q96BQ5 260 aa16.96■□□□□ 0.31
NCBP3-207ENST00000577169 ANKRD36BP1Q96IX9 119 aa16.96■□□□□ 0.31
NCBP3-207ENST00000577169 SENP8Q96LD8 212 aa16.96■□□□□ 0.31
NCBP3-207ENST00000577169 MTRRQ9UBK8 725 aa16.96■□□□□ 0.31
NCBP3-207ENST00000577169 MAN1B1Q9UKM7 699 aa16.96■□□□□ 0.31
NCBP3-207ENST00000577169 BACE2Q9Y5Z0 518 aa16.96■□□□□ 0.31
NCBP3-207ENST00000577169 PTPRJQ12913 1337 aa16.96■□□□□ 0.3
NCBP3-207ENST00000577169 REV3LO60673 3130 aa16.95■□□□□ 0.3
NCBP3-207ENST00000577169 PLXNA3P51805 1871 aa16.95■□□□□ 0.3
NCBP3-207ENST00000577169 H7C4K7 107 aa16.95■□□□□ 0.3
NCBP3-207ENST00000577169 TBC1D4O60343 1298 aa16.95■□□□□ 0.3
NCBP3-207ENST00000577169 GLUD1P00367 558 aa16.95■□□□□ 0.3
NCBP3-207ENST00000577169 C1RP00736 705 aa16.95■□□□□ 0.3
NCBP3-207ENST00000577169 ITGB3P05106 788 aa16.95■□□□□ 0.3
NCBP3-207ENST00000577169 TMEM191BP0C7N4 346 aa16.95■□□□□ 0.3
NCBP3-207ENST00000577169 PAX3P23760 479 aa16.95■□□□□ 0.3
NCBP3-207ENST00000577169 POLR2BP30876 1174 aaKnown RBP16.95■□□□□ 0.3
NCBP3-207ENST00000577169 CASP4P49662 377 aa16.95■□□□□ 0.3
NCBP3-207ENST00000577169 MYBPC2Q14324 1141 aa16.95■□□□□ 0.3
NCBP3-207ENST00000577169 DUOXA2Q1HG44 320 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms