RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 LMAN1LQ9HAT1 526 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 PARD6AQ9NPB6 346 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 ASAH2Q9NR71 780 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 FBXL5Q9UKA1 691 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 CITO14578 2027 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 SPTBN2O15020 2390 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 CCDC169A6NNP5 214 aa12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 FOXD2O60548 495 aaPredicted RBP12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 KRT37O76014 449 aa12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 SEC24AO95486 1093 aa12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 CCR2P41597 374 aa12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 CXCL12P48061 93 aa12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 MLLT6P55198 1093 aaPredicted RBP12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 OSTNP61366 133 aa12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 MRPL58Q14197 206 aaKnown RBP12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 LRRC32Q14392 662 aa12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 PDCD11Q14690 1871 aaKnown RBP12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 LPAL2Q16609 132 aa12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 ME3Q16798 604 aa12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 ALKAL1Q6UXT8 129 aa12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 CEP120Q8N960 986 aa12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 APPL2Q8NEU8 664 aa12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 ZSCAN18Q8TBC5 510 aaPredicted RBP12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 CSGALNACT1Q8TDX6 532 aa12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 E2F7Q96AV8 911 aa12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 ACAP3Q96P50 834 aa12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 ACO2Q99798 780 aaKnown RBP12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 TCHPQ9BT92 498 aa12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 GPR88Q9GZN0 384 aa12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 SLITRK6Q9H5Y7 841 aa12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 TRPV4Q9HBA0 871 aa12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 AFF4Q9UHB7 1163 aaKnown RBP12.75□□□□□ -0.37
CTDNEP1-212ENST00000576613 SLC30A4O14863 429 aa12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 JAK2O60674 1132 aa12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 ADRB1P08588 477 aa12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 MCF2P10911 925 aa12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 MYL4P12829 197 aa12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 CPB1P15086 417 aa12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 KCNE1P15382 129 aa12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 CCNE1P24864 410 aa12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 MCM4P33991 863 aa12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 CNR2P34972 360 aa12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 CCT6AP40227 531 aaKnown RBP12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 EPHA5P54756 1037 aa12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 TWF1Q12792 350 aa12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 DMP1Q13316 513 aaPredicted RBP12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 SIM2Q14190 667 aaPredicted RBP12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 MFSD6LQ8IWD5 586 aa12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 YAF2Q8IY57 180 aa12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 SUSD3Q96L08 255 aa12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 ZSWIM3Q96MP5 696 aa12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 ZMAT2Q96NC0 199 aaKnown RBP12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 PTPRHQ9HD43 1115 aa12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 CNTN3Q9P232 1028 aa12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 RBM19Q9Y4C8 960 aaKnown RBP12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 STK24Q9Y6E0 443 aa12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 F5P12259 2224 aa12.74□□□□□ -0.37
CTDNEP1-212ENST00000576613 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 LARGE1O95461 756 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 CHRNB1P11230 501 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 MARCKSP29966 332 aaPredicted RBP12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 VIPR2P41587 438 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 NPTX2P47972 431 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 PEX3P56589 373 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 SATB1Q01826 763 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 PLD1Q13393 1074 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 CSRP2Q16527 193 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 PPM1JQ5JR12 505 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 MPZL3Q6UWV2 235 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 HS6ST3Q8IZP7 471 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 SPEM1Q8N4L4 309 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 DRC1Q96MC2 740 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 TBC1D32Q96NH3 1257 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 OXCT2Q9BYC2 517 aaPredicted RBP12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 TMEM134Q9H6X4 195 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 POLD4Q9HCU8 107 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 KMT5AQ9NQR1 393 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 SEMA4GQ9NTN9 838 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 CEP72Q9P209 647 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 LRWD1Q9UFC0 647 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 KIAA1024Q9UPX6 916 aa12.73□□□□□ -0.37
CTDNEP1-212ENST00000576613 CHD8Q9HCK8 2581 aa12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 HEPACAM2A8MVW5 462 aa12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 NRG2O14511 850 aaPredicted RBP12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 CHADO15335 359 aa12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 MOSPD3O75425 235 aa12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 GJA1P17302 382 aa12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 PROZP22891 400 aa12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 FXR2P51116 673 aaKnown RBP eCLIP12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 KPNA1P52294 538 aaPredicted RBP12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 GUCY1B3Q02153 619 aa12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 YWHAHQ04917 246 aaPredicted RBP12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 PTGDRQ13258 359 aa12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 TEAD2Q15562 447 aa12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 ZNF174Q15697 407 aa12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 ST3GAL2Q16842 350 aa12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 TTC38Q5R3I4 469 aa12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 PRR23CQ6ZRP0 262 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms