RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 TNFRSF10AO00220 468 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 RFPL2O75678 378 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 B3GAT3O94766 335 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 WEE2P0C1S8 567 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 HOXB8P17481 243 aaPredicted RBP9.43□□□□□ -0.9
SMG6-216ENST00000575176 YARSP54577 528 aaKnown RBP9.43□□□□□ -0.9
SMG6-216ENST00000575176 NUCB2P80303 420 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 PPP2R3AQ06190 1150 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 PSMD5Q16401 504 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 PUS10Q3MIT2 529 aaKnown RBP9.43□□□□□ -0.9
SMG6-216ENST00000575176 KMT5BQ4FZB7 885 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 VARS2Q5ST30 1063 aaKnown RBP9.43□□□□□ -0.9
SMG6-216ENST00000575176 C9orf57Q5W0N0 161 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 DCLRE1AQ6PJP8 1040 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 APBB1IPQ7Z5R6 666 aaPredicted RBP9.43□□□□□ -0.9
SMG6-216ENST00000575176 CBWD2Q8IUF1 395 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 C1orf127Q8N9H9 656 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 BEST2Q8NFU1 509 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 MICAL1Q8TDZ2 1067 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 TCHPQ9BT92 498 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 APOL5Q9BWW9 433 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 ADAM7Q9H2U9 754 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 ASB7Q9H672 318 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 SLC38A7Q9NVC3 462 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 DZANK1Q9NVP4 752 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 DMAC2Q9NW81 257 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 FAM13BQ9NYF5 915 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 UBQLN1Q9UMX0 589 aaKnown RBP9.43□□□□□ -0.9
SMG6-216ENST00000575176 DERAQ9Y315 318 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 BACE2Q9Y5Z0 518 aa9.43□□□□□ -0.9
SMG6-216ENST00000575176 GOLGA8IPA6NC78 632 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 GOLGA8JA6NMD2 632 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 EXTL3O43909 919 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 GADD45BO75293 160 aaPredicted RBP9.42□□□□□ -0.9
SMG6-216ENST00000575176 RHOBTB3O94955 611 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 RPL9P32969 192 aaKnown RBP9.42□□□□□ -0.9
SMG6-216ENST00000575176 SYKP43405 635 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 LILRA4P59901 499 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 MCCD1P59942 119 aaPredicted RBP9.42□□□□□ -0.9
SMG6-216ENST00000575176 ROR1Q01973 937 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 RAB33AQ14088 237 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 KYAT1Q16773 422 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 C1orf220Q5T0J3 134 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 SLFN12LQ6IEE8 588 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 LIMS2Q7Z4I7 341 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 GPR149Q86SP6 731 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 POMGNT1Q8WZA1 660 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 KIF12Q96FN5 646 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 TSPAN18Q96SJ8 248 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 FAM213AQ9BRX8 229 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 CRISPLD1Q9H336 500 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 SFXN1Q9H9B4 322 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 RPF1Q9H9Y2 349 aaKnown RBP9.42□□□□□ -0.9
SMG6-216ENST00000575176 SLC39A2Q9NP94 309 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.42□□□□□ -0.9
SMG6-216ENST00000575176 HSPBP1Q9NZL4 362 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 USP25Q9UHP3 1055 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 CIZ1Q9ULV3 898 aaPredicted RBP9.42□□□□□ -0.9
SMG6-216ENST00000575176 PCDHB13Q9Y5F0 798 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 ATP6V1DQ9Y5K8 247 aa9.42□□□□□ -0.9
SMG6-216ENST00000575176 ZDBF2Q9HCK1 2354 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 KIAA1549LQ6ZVL6 1849 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 SYN3O14994 580 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 TADA2AO75478 443 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 ABLIM3O94929 683 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 ZNF202O95125 648 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 GLUD1P00367 558 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 CYP11A1P05108 521 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 MYL1P05976 194 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 ADH1AP07327 375 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 POU2F2P09086 479 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 ITIH3Q06033 890 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 ELAVL2Q12926 359 aaKnown RBP9.41□□□□□ -0.9
SMG6-216ENST00000575176 TMEM132DQ14C87 1099 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 RARS2Q5T160 578 aaKnown RBP9.41□□□□□ -0.9
SMG6-216ENST00000575176 C15orf39Q6ZRI6 1047 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 PPFIBP1Q86W92 1011 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 GLYCTKQ8IVS8 523 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 CD302Q8IX05 232 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 NELFCDQ8IXH7 590 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 GPD1LQ8N335 351 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 OR5B17Q8NGF7 314 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 OR10T2Q8NGX3 314 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 HDAC7Q8WUI4 952 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 PKMYT1Q99640 499 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 PYM1Q9BRP8 204 aaKnown RBP9.41□□□□□ -0.9
SMG6-216ENST00000575176 PHF7Q9BWX1 381 aaPredicted RBP9.41□□□□□ -0.9
SMG6-216ENST00000575176 EMILIN2Q9BXX0 1053 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 LRRC27Q9C0I9 530 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 PCIF1Q9H4Z3 704 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 TMEM206Q9H813 350 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 PDE11AQ9HCR9 933 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 RBAKQ9NYW8 714 aaPredicted RBP9.41□□□□□ -0.9
SMG6-216ENST00000575176 FBXL5Q9UKA1 691 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 PCDHB8Q9UN66 801 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 NME7Q9Y5B8 376 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 CDY1Q9Y6F8 540 aa9.41□□□□□ -0.9
SMG6-216ENST00000575176 MYO16Q9Y6X6 1858 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.4□□□□□ -0.9
SMG6-216ENST00000575176 C2CD4DB7Z1M9 353 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms