RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 IQCEQ6IPM2 695 aa19.24■□□□□ 0.67
CCDC40-211ENST00000574099 Q6ZS52 159 aa19.24■□□□□ 0.67
CCDC40-211ENST00000574099 DEPDC1BQ8WUY9 529 aa19.24■□□□□ 0.67
CCDC40-211ENST00000574099 WASF1Q92558 559 aa19.24■□□□□ 0.67
CCDC40-211ENST00000574099 NACC1Q96RE7 527 aa19.24■□□□□ 0.67
CCDC40-211ENST00000574099 SLITRK6Q9H5Y7 841 aa19.24■□□□□ 0.67
CCDC40-211ENST00000574099 CEP72Q9P209 647 aa19.24■□□□□ 0.67
CCDC40-211ENST00000574099 FBXL5Q9UKA1 691 aa19.24■□□□□ 0.67
CCDC40-211ENST00000574099 NUB1Q9Y5A7 615 aa19.24■□□□□ 0.67
CCDC40-211ENST00000574099 USP24Q9UPU5 2620 aa19.23■□□□□ 0.67
CCDC40-211ENST00000574099 SLC38A8A6NNN8 435 aa19.23■□□□□ 0.67
CCDC40-211ENST00000574099 HEPACAM2A8MVW5 462 aa19.23■□□□□ 0.67
CCDC40-211ENST00000574099 MICAL2O94851 1124 aa19.23■□□□□ 0.67
CCDC40-211ENST00000574099 FDPSP14324 419 aaKnown RBP19.23■□□□□ 0.67
CCDC40-211ENST00000574099 MCM7P33993 719 aa19.23■□□□□ 0.67
CCDC40-211ENST00000574099 YARSP54577 528 aaKnown RBP19.23■□□□□ 0.67
CCDC40-211ENST00000574099 TEAD2Q15562 447 aa19.23■□□□□ 0.67
CCDC40-211ENST00000574099 CTXN3Q4LDR2 81 aa19.23■□□□□ 0.67
CCDC40-211ENST00000574099 DIS3L2Q8IYB7 885 aaKnown RBP19.23■□□□□ 0.67
CCDC40-211ENST00000574099 CSGALNACT1Q8TDX6 532 aa19.23■□□□□ 0.67
CCDC40-211ENST00000574099 ZNF512Q96ME7 567 aaPredicted RBP19.23■□□□□ 0.67
CCDC40-211ENST00000574099 CCDC94Q9BW85 323 aaPredicted RBP19.23■□□□□ 0.67
CCDC40-211ENST00000574099 TRPV5Q9NQA5 729 aa19.23■□□□□ 0.67
CCDC40-211ENST00000574099 CITO14578 2027 aa19.22■□□□□ 0.67
CCDC40-211ENST00000574099 H7C4K7 107 aa19.22■□□□□ 0.67
CCDC40-211ENST00000574099 SYN3O14994 580 aa19.22■□□□□ 0.67
CCDC40-211ENST00000574099 HOXC13P31276 330 aa19.22■□□□□ 0.67
CCDC40-211ENST00000574099 PTGDRQ13258 359 aa19.22■□□□□ 0.67
CCDC40-211ENST00000574099 ZNF568Q3ZCX4 644 aa19.22■□□□□ 0.67
CCDC40-211ENST00000574099 CEP68Q76N32 757 aa19.22■□□□□ 0.67
CCDC40-211ENST00000574099 APBB1IPQ7Z5R6 666 aaPredicted RBP19.22■□□□□ 0.67
CCDC40-211ENST00000574099 GPIHBP1Q8IV16 184 aa19.22■□□□□ 0.67
CCDC40-211ENST00000574099 SPEM1Q8N4L4 309 aa19.22■□□□□ 0.67
CCDC40-211ENST00000574099 RSPRY1Q96DX4 576 aa19.22■□□□□ 0.67
CCDC40-211ENST00000574099 IFT74Q96LB3 600 aa19.22■□□□□ 0.67
CCDC40-211ENST00000574099 ZMAT2Q96NC0 199 aaKnown RBP19.22■□□□□ 0.67
CCDC40-211ENST00000574099 CDT1Q9H211 546 aa19.22■□□□□ 0.67
CCDC40-211ENST00000574099 ASAH2Q9NR71 780 aa19.22■□□□□ 0.67
CCDC40-211ENST00000574099 TOPORSQ9NS56 1045 aaPredicted RBP19.22■□□□□ 0.67
CCDC40-211ENST00000574099 K7ESF4 209 aa19.21■□□□□ 0.67
CCDC40-211ENST00000574099 ARNTLO00327 626 aa19.21■□□□□ 0.67
CCDC40-211ENST00000574099 CPB1P15086 417 aa19.21■□□□□ 0.67
CCDC40-211ENST00000574099 GRM5P41594 1212 aa19.21■□□□□ 0.67
CCDC40-211ENST00000574099 KPNA1P52294 538 aaPredicted RBP19.21■□□□□ 0.67
CCDC40-211ENST00000574099 EFNA5P52803 228 aa19.21■□□□□ 0.67
CCDC40-211ENST00000574099 LRRC32Q14392 662 aa19.21■□□□□ 0.67
CCDC40-211ENST00000574099 WDR44Q5JSH3 913 aa19.21■□□□□ 0.67
CCDC40-211ENST00000574099 TPGS2Q68CL5 300 aa19.21■□□□□ 0.67
CCDC40-211ENST00000574099 ZNF280DQ6N043 979 aa19.21■□□□□ 0.67
CCDC40-211ENST00000574099 LONP2Q86WA8 852 aa19.21■□□□□ 0.67
CCDC40-211ENST00000574099 MFSD6LQ8IWD5 586 aa19.21■□□□□ 0.67
CCDC40-211ENST00000574099 YAF2Q8IY57 180 aa19.21■□□□□ 0.67
CCDC40-211ENST00000574099 FAM160A2Q8N612 972 aaPredicted RBP19.21■□□□□ 0.67
CCDC40-211ENST00000574099 NECAB1Q8N987 351 aa19.21■□□□□ 0.67
CCDC40-211ENST00000574099 TTC8Q8TAM2 541 aa19.21■□□□□ 0.67
CCDC40-211ENST00000574099 C18orf25Q96B23 403 aaPredicted RBP19.21■□□□□ 0.67
CCDC40-211ENST00000574099 POLR3CQ9BUI4 534 aaPredicted RBP19.21■□□□□ 0.67
CCDC40-211ENST00000574099 SLC38A7Q9NVC3 462 aa19.21■□□□□ 0.67
CCDC40-211ENST00000574099 C2orf42Q9NWW7 574 aa19.21■□□□□ 0.67
CCDC40-211ENST00000574099 RALYQ9UKM9 306 aaKnown RBP19.21■□□□□ 0.67
CCDC40-211ENST00000574099 TNFSF13BQ9Y275 285 aa19.21■□□□□ 0.67
CCDC40-211ENST00000574099 GREB1Q4ZG55 1949 aa19.2■□□□□ 0.66
CCDC40-211ENST00000574099 HARSP12081 509 aaKnown RBP19.2■□□□□ 0.66
CCDC40-211ENST00000574099 MCM4P33991 863 aa19.2■□□□□ 0.66
CCDC40-211ENST00000574099 MRPL58Q14197 206 aaKnown RBP19.2■□□□□ 0.66
CCDC40-211ENST00000574099 CCDC6Q16204 474 aa19.2■□□□□ 0.66
CCDC40-211ENST00000574099 AASDHQ4L235 1098 aaPredicted RBP19.2■□□□□ 0.66
CCDC40-211ENST00000574099 IL31Q6EBC2 164 aa19.2■□□□□ 0.66
CCDC40-211ENST00000574099 RNF19BQ6ZMZ0 732 aa19.2■□□□□ 0.66
CCDC40-211ENST00000574099 SHKBP1Q8TBC3 707 aa19.2■□□□□ 0.66
CCDC40-211ENST00000574099 AFF4Q9UHB7 1163 aaKnown RBP19.2■□□□□ 0.66
CCDC40-211ENST00000574099 KIF26AQ9ULI4 1882 aaPredicted RBP19.2■□□□□ 0.66
CCDC40-211ENST00000574099 A0A1W2PRU2 124 aa19.19■□□□□ 0.66
CCDC40-211ENST00000574099 K7ERI5 159 aa19.19■□□□□ 0.66
CCDC40-211ENST00000574099 RPA1P27694 616 aa19.19■□□□□ 0.66
CCDC40-211ENST00000574099 SF3A2Q15428 464 aaKnown RBP19.19■□□□□ 0.66
CCDC40-211ENST00000574099 XKR4Q5GH76 650 aa19.19■□□□□ 0.66
CCDC40-211ENST00000574099 TXNDC11Q6PKC3 985 aa19.19■□□□□ 0.66
CCDC40-211ENST00000574099 ALKAL1Q6UXT8 129 aa19.19■□□□□ 0.66
CCDC40-211ENST00000574099 ERMNQ8TAM6 284 aa19.19■□□□□ 0.66
CCDC40-211ENST00000574099 TRPV4Q9HBA0 871 aa19.19■□□□□ 0.66
CCDC40-211ENST00000574099 ANGPTL2Q9UKU9 493 aa19.19■□□□□ 0.66
CCDC40-211ENST00000574099 YIPF1Q9Y548 306 aa19.19■□□□□ 0.66
CCDC40-211ENST00000574099 PHLPP2Q6ZVD8 1323 aa19.19■□□□□ 0.66
CCDC40-211ENST00000574099 CCDC169A6NNP5 214 aa19.18■□□□□ 0.66
CCDC40-211ENST00000574099 EPB41L2O43491 1005 aaKnown RBP19.18■□□□□ 0.66
CCDC40-211ENST00000574099 LARGE1O95461 756 aa19.18■□□□□ 0.66
CCDC40-211ENST00000574099 CNR2P34972 360 aa19.18■□□□□ 0.66
CCDC40-211ENST00000574099 EPHA5P54756 1037 aa19.18■□□□□ 0.66
CCDC40-211ENST00000574099 STXBP5Q5T5C0 1151 aa19.18■□□□□ 0.66
CCDC40-211ENST00000574099 TMEM130Q8N3G9 435 aa19.18■□□□□ 0.66
CCDC40-211ENST00000574099 LEMD2Q8NC56 503 aa19.18■□□□□ 0.66
CCDC40-211ENST00000574099 FAM200AQ8TCP9 573 aa19.18■□□□□ 0.66
CCDC40-211ENST00000574099 DDX12PQ92771 950 aa19.18■□□□□ 0.66
CCDC40-211ENST00000574099 KIFAP3Q92845 792 aa19.18■□□□□ 0.66
CCDC40-211ENST00000574099 ZFYVE19Q96K21 471 aa19.18■□□□□ 0.66
CCDC40-211ENST00000574099 SUSD3Q96L08 255 aa19.18■□□□□ 0.66
CCDC40-211ENST00000574099 TBC1D32Q96NH3 1257 aa19.18■□□□□ 0.66
CCDC40-211ENST00000574099 PGLYRP2Q96PD5 576 aa19.18■□□□□ 0.66
CCDC40-211ENST00000574099 ACO2Q99798 780 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms