RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 MRPL17Q9NRX2 175 aaKnown RBP11.94□□□□□ -0.5
CHD3-216ENST00000573936 CLDND1Q9NY35 253 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 FRMD4BQ9Y2L6 1034 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 NUB1Q9Y5A7 615 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 IRAK3Q9Y616 596 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 C2orf71A6NGG8 1288 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 PSMA7O14818 248 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 MAPK13O15264 365 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 EFEMP2O95967 443 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 NFICP08651 508 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 TMEM191BP0C7N4 346 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 PTMSP20962 102 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 GLUD2P49448 558 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 TFAMQ00059 246 aaKnown RBP11.93□□□□□ -0.5
CHD3-216ENST00000573936 DSG1Q02413 1049 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 NHLH1Q02575 133 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 CREMQ03060 361 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 CYP24A1Q07973 514 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 MORC3Q14149 939 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 PSMD6Q15008 389 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 NFKBIBQ15653 356 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 CENPPQ6IPU0 288 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 USP37Q86T82 979 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 CBWD2Q8IUF1 395 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 SMYD4Q8IYR2 804 aaPredicted RBP11.93□□□□□ -0.5
CHD3-216ENST00000573936 ADSSL1Q8N142 457 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 HASPINQ8TF76 798 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 RABGGTAQ92696 567 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 PABPC5Q96DU9 382 aaKnown RBP11.93□□□□□ -0.5
CHD3-216ENST00000573936 EMILIN2Q9BXX0 1053 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 GPR62Q9BZJ7 368 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 TLE6Q9H808 572 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 PDE11AQ9HCR9 933 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.93□□□□□ -0.5
CHD3-216ENST00000573936 CHST7Q9NS84 486 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 DPP3Q9NY33 737 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 TUBGCP4Q9UGJ1 667 aa11.93□□□□□ -0.5
CHD3-216ENST00000573936 R3HCC1Q9Y3T6 440 aaKnown RBP11.93□□□□□ -0.5
CHD3-216ENST00000573936 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.92□□□□□ -0.5
CHD3-216ENST00000573936 BICDL2A1A5D9 508 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 ARHGEF37A1IGU5 675 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 CETN3O15182 167 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 TNNC2P02585 160 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 NR2F2P24468 414 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 CCNE1P24864 410 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 PNPLA4P41247 253 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 AP3M2P53677 418 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 LRRC63Q05C16 580 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 ADAM9Q13443 819 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 CLUL1Q15846 466 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 DUSP6Q16828 381 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 DUOXA2Q1HG44 320 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 ZCWPW2Q504Y3 356 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 FAM171A1Q5VUB5 890 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 KIAA0319Q5VV43 1072 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 CEP135Q66GS9 1140 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 ISM2Q6H9L7 571 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.92□□□□□ -0.5
CHD3-216ENST00000573936 TAS1R1Q7RTX1 841 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 PPFIBP1Q86W92 1011 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 WDR49Q8IV35 697 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 ADHFE1Q8IWW8 467 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 EFCAB13Q8IY85 973 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 POP1Q99575 1024 aaKnown RBP11.92□□□□□ -0.5
CHD3-216ENST00000573936 TTPALQ9BTX7 342 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 VN1R3Q9BXE9 311 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 CACNG4Q9UBN1 327 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 ITGA11Q9UKX5 1188 aa11.92□□□□□ -0.5
CHD3-216ENST00000573936 CITO14578 2027 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 ANO9A1A5B4 782 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 HIDE1A8MVS5 230 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 F8W810 466 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 BIN1O00499 593 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 PIRO00625 290 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 SYN3O14994 580 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 LILRB3O75022 631 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 SRGAP2BP0DMP2 458 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 TNNI1P19237 187 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 PSMC2P35998 433 aaKnown RBP11.91□□□□□ -0.5
CHD3-216ENST00000573936 NRIP1P48552 1158 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 RBP5P82980 135 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 FKBP3Q00688 224 aaKnown RBP11.91□□□□□ -0.5
CHD3-216ENST00000573936 ENPEPQ07075 957 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 HYAL1Q12794 435 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 COL19A1Q14993 1142 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 PTPN14Q15678 1187 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 C9orf57Q5W0N0 161 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 FOXR2Q6PJQ5 311 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 CD300LGQ6UXG3 332 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 DSTYKQ6XUX3 929 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 ADGRD2Q7Z7M1 963 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 RBM23Q86U06 439 aaKnown RBP11.91□□□□□ -0.5
CHD3-216ENST00000573936 CEP57Q86XR8 500 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 CSGALNACT2Q8N6G5 542 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 EFHBQ8N7U6 833 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 APPL2Q8NEU8 664 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 GPT2Q8TD30 523 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 TMC2Q8TDI7 906 aa11.91□□□□□ -0.5
CHD3-216ENST00000573936 RIN2Q8WYP3 895 aaPredicted RBP11.91□□□□□ -0.5
CHD3-216ENST00000573936 SUSD3Q96L08 255 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms