RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 NCOR1O75376 2440 aa30.11■■■□□ 2.41
SCARF1-207ENST00000573867 TRAPPC3O43617 180 aa30.11■■■□□ 2.41
SCARF1-207ENST00000573867 CREMQ03060 361 aa30.11■■■□□ 2.41
SCARF1-207ENST00000573867 CBX2Q14781 532 aaPredicted RBP30.11■■■□□ 2.41
SCARF1-207ENST00000573867 BMT2Q1RMZ1 405 aa30.11■■■□□ 2.41
SCARF1-207ENST00000573867 KIAA0895Q8NCT3 520 aa30.11■■■□□ 2.41
SCARF1-207ENST00000573867 FAM84AQ96KN4 292 aa30.11■■■□□ 2.41
SCARF1-207ENST00000573867 C2CD2Q9Y426 696 aa30.11■■■□□ 2.41
SCARF1-207ENST00000573867 EXTL3O43909 919 aa30.1■■■□□ 2.41
SCARF1-207ENST00000573867 ZNF202O95125 648 aa30.1■■■□□ 2.41
SCARF1-207ENST00000573867 MCM4P33991 863 aa30.1■■■□□ 2.41
SCARF1-207ENST00000573867 ITIH3Q06033 890 aa30.1■■■□□ 2.41
SCARF1-207ENST00000573867 STK4Q13043 487 aa30.1■■■□□ 2.41
SCARF1-207ENST00000573867 BEST2Q8NFU1 509 aa30.1■■■□□ 2.41
SCARF1-207ENST00000573867 POMKQ9H5K3 350 aa30.1■■■□□ 2.41
SCARF1-207ENST00000573867 SFXN1Q9H9B4 322 aa30.1■■■□□ 2.41
SCARF1-207ENST00000573867 UBE4BO95155 1302 aa30.1■■■□□ 2.41
SCARF1-207ENST00000573867 XPOTO43592 962 aaKnown RBP30.09■■■□□ 2.41
SCARF1-207ENST00000573867 RFPL2O75678 378 aa30.09■■■□□ 2.41
SCARF1-207ENST00000573867 AARSP49588 968 aaKnown RBP eCLIP30.09■■■□□ 2.41
SCARF1-207ENST00000573867 VARS2Q5ST30 1063 aaKnown RBP30.09■■■□□ 2.41
SCARF1-207ENST00000573867 PHF7Q9BWX1 381 aaPredicted RBP30.09■■■□□ 2.41
SCARF1-207ENST00000573867 AGPAT3Q9NRZ7 376 aa30.09■■■□□ 2.41
SCARF1-207ENST00000573867 EXOC1Q9NV70 894 aa30.09■■■□□ 2.41
SCARF1-207ENST00000573867 RBAKQ9NYW8 714 aaPredicted RBP30.09■■■□□ 2.41
SCARF1-207ENST00000573867 CIZ1Q9ULV3 898 aaPredicted RBP30.09■■■□□ 2.41
SCARF1-207ENST00000573867 ANO9A1A5B4 782 aa30.08■■■□□ 2.41
SCARF1-207ENST00000573867 SYN3O14994 580 aa30.08■■■□□ 2.41
SCARF1-207ENST00000573867 SPTLC1O15269 473 aa30.08■■■□□ 2.41
SCARF1-207ENST00000573867 IL18RAPO95256 599 aa30.08■■■□□ 2.41
SCARF1-207ENST00000573867 LDHAP00338 332 aaKnown RBP30.08■■■□□ 2.41
SCARF1-207ENST00000573867 SSTR3P32745 418 aaPredicted RBP30.08■■■□□ 2.41
SCARF1-207ENST00000573867 DPYDQ12882 1025 aa30.08■■■□□ 2.41
SCARF1-207ENST00000573867 MRPL58Q14197 206 aaKnown RBP30.08■■■□□ 2.41
SCARF1-207ENST00000573867 C9orf57Q5W0N0 161 aa30.08■■■□□ 2.41
SCARF1-207ENST00000573867 CES5AQ6NT32 575 aa30.08■■■□□ 2.41
SCARF1-207ENST00000573867 PDXDC1Q6P996 788 aa30.08■■■□□ 2.41
SCARF1-207ENST00000573867 FMR1NBQ8N0W7 255 aaPredicted RBP30.08■■■□□ 2.41
SCARF1-207ENST00000573867 GPD1LQ8N335 351 aa30.08■■■□□ 2.41
SCARF1-207ENST00000573867 NOC3LQ8WTT2 800 aaKnown RBP30.08■■■□□ 2.41
SCARF1-207ENST00000573867 HSPBP1Q9NZL4 362 aa30.08■■■□□ 2.41
SCARF1-207ENST00000573867 GTF3C5Q9Y5Q8 519 aaPredicted RBP30.08■■■□□ 2.41
SCARF1-207ENST00000573867 BACE2Q9Y5Z0 518 aa30.08■■■□□ 2.41
SCARF1-207ENST00000573867 TBC1D4O60343 1298 aa30.07■■■□□ 2.4
SCARF1-207ENST00000573867 C1RP00736 705 aa30.07■■■□□ 2.4
SCARF1-207ENST00000573867 RPN1P04843 607 aaKnown RBP30.07■■■□□ 2.4
SCARF1-207ENST00000573867 OR1D2P34982 312 aa30.07■■■□□ 2.4
SCARF1-207ENST00000573867 SCARA3Q6AZY7 606 aa30.07■■■□□ 2.4
SCARF1-207ENST00000573867 ANKS3Q6ZW76 656 aa30.07■■■□□ 2.4
SCARF1-207ENST00000573867 GPR149Q86SP6 731 aa30.07■■■□□ 2.4
SCARF1-207ENST00000573867 CBWD2Q8IUF1 395 aa30.07■■■□□ 2.4
SCARF1-207ENST00000573867 KREMEN2Q8NCW0 462 aa30.07■■■□□ 2.4
SCARF1-207ENST00000573867 FBXW11Q9UKB1 542 aa30.07■■■□□ 2.4
SCARF1-207ENST00000573867 PCDHB8Q9UN66 801 aa30.07■■■□□ 2.4
SCARF1-207ENST00000573867 CDY1Q9Y6F8 540 aa30.07■■■□□ 2.4
SCARF1-207ENST00000573867 LOC730098B7Z3J9 87 aa30.06■■■□□ 2.4
SCARF1-207ENST00000573867 M0QZQ0 153 aa30.06■■■□□ 2.4
SCARF1-207ENST00000573867 PIRO00625 290 aa30.06■■■□□ 2.4
SCARF1-207ENST00000573867 CLIC2O15247 247 aa30.06■■■□□ 2.4
SCARF1-207ENST00000573867 MYL1P05976 194 aa30.06■■■□□ 2.4
SCARF1-207ENST00000573867 RAB33AQ14088 237 aa30.06■■■□□ 2.4
SCARF1-207ENST00000573867 ENGASEQ8NFI3 743 aa30.06■■■□□ 2.4
SCARF1-207ENST00000573867 PDE11AQ9HCR9 933 aa30.06■■■□□ 2.4
SCARF1-207ENST00000573867 DPP3Q9NY33 737 aa30.06■■■□□ 2.4
SCARF1-207ENST00000573867 SNW1Q13573 536 aaKnown RBP30.05■■■□□ 2.4
SCARF1-207ENST00000573867 CMASQ8NFW8 434 aaPredicted RBP30.05■■■□□ 2.4
SCARF1-207ENST00000573867 HDAC7Q8WUI4 952 aa30.05■■■□□ 2.4
SCARF1-207ENST00000573867 ZNF707Q96C28 371 aaPredicted RBP30.05■■■□□ 2.4
SCARF1-207ENST00000573867 RPGRIP1Q96KN7 1286 aa30.05■■■□□ 2.4
SCARF1-207ENST00000573867 POP1Q99575 1024 aaKnown RBP30.05■■■□□ 2.4
SCARF1-207ENST00000573867 PLEKHA4Q9H4M7 779 aa30.05■■■□□ 2.4
SCARF1-207ENST00000573867 TIMM13Q9Y5L4 95 aaPredicted RBP30.05■■■□□ 2.4
SCARF1-207ENST00000573867 PTPRJQ12913 1337 aa30.04■■■□□ 2.4
SCARF1-207ENST00000573867 SPDYE4A6NLX3 237 aa30.04■■■□□ 2.4
SCARF1-207ENST00000573867 KIAA0391O15091 583 aaKnown RBP30.04■■■□□ 2.4
SCARF1-207ENST00000573867 PAPLNO95428 1278 aa30.04■■■□□ 2.4
SCARF1-207ENST00000573867 MTHFRP42898 656 aa30.04■■■□□ 2.4
SCARF1-207ENST00000573867 LILRA4P59901 499 aa30.04■■■□□ 2.4
SCARF1-207ENST00000573867 KNOP1Q1ED39 458 aaKnown RBP30.04■■■□□ 2.4
SCARF1-207ENST00000573867 C2orf16Q68DN1 1984 aa30.03■■■□□ 2.4
SCARF1-207ENST00000573867 CCDC195A0A1B0GUA6 201 aa30.03■■■□□ 2.4
SCARF1-207ENST00000573867 SP100P23497 879 aaPredicted RBP30.03■■■□□ 2.4
SCARF1-207ENST00000573867 TFAMQ00059 246 aaKnown RBP30.03■■■□□ 2.4
SCARF1-207ENST00000573867 PSMD2Q13200 908 aa30.03■■■□□ 2.4
SCARF1-207ENST00000573867 SLC8B1Q6J4K2 584 aa30.03■■■□□ 2.4
SCARF1-207ENST00000573867 RIPOR3Q96MK2 946 aa30.03■■■□□ 2.4
SCARF1-207ENST00000573867 NECTIN4Q96NY8 510 aa30.03■■■□□ 2.4
SCARF1-207ENST00000573867 FBXL5Q9UKA1 691 aa30.03■■■□□ 2.4
SCARF1-207ENST00000573867 DENND4AQ7Z401 1863 aa30.02■■■□□ 2.4
SCARF1-207ENST00000573867 TULP1O00294 542 aaPredicted RBP30.02■■■□□ 2.4
SCARF1-207ENST00000573867 RHOBTB3O94955 611 aa30.02■■■□□ 2.4
SCARF1-207ENST00000573867 CYP2J2P51589 502 aa30.02■■■□□ 2.4
SCARF1-207ENST00000573867 ROR1Q01973 937 aa30.02■■■□□ 2.4
SCARF1-207ENST00000573867 ATAT1Q5SQI0 421 aa30.02■■■□□ 2.4
SCARF1-207ENST00000573867 LMBRD2Q68DH5 695 aaPredicted RBP30.02■■■□□ 2.4
SCARF1-207ENST00000573867 C15orf39Q6ZRI6 1047 aa30.02■■■□□ 2.4
SCARF1-207ENST00000573867 NT5DC4Q86YG4 428 aa30.02■■■□□ 2.4
SCARF1-207ENST00000573867 C1orf127Q8N9H9 656 aa30.02■■■□□ 2.4
SCARF1-207ENST00000573867 CXorf38Q8TB03 319 aa30.02■■■□□ 2.4
SCARF1-207ENST00000573867 MTCL1Q9Y4B5 1905 aaKnown RBP30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms