RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 ZFP36P26651 326 aaKnown RBP6.12□□□□□ -1.43
CDC27-215ENST00000573550 ACVRL1P37023 503 aa6.12□□□□□ -1.43
CDC27-215ENST00000573550 ADKP55263 362 aaKnown RBP6.12□□□□□ -1.43
CDC27-215ENST00000573550 KIF23Q02241 960 aaPredicted RBP6.12□□□□□ -1.43
CDC27-215ENST00000573550 NHLH2Q02577 135 aa6.12□□□□□ -1.43
CDC27-215ENST00000573550 TARDBPQ13148 414 aaKnown RBP eCLIP6.12□□□□□ -1.43
CDC27-215ENST00000573550 C3orf36Q3SXR2 165 aa6.12□□□□□ -1.43
CDC27-215ENST00000573550 ATXN7L2Q5T6C5 722 aaPredicted RBP6.12□□□□□ -1.43
CDC27-215ENST00000573550 FAM102AQ5T9C2 384 aaPredicted RBP6.12□□□□□ -1.43
CDC27-215ENST00000573550 METRNLQ641Q3 311 aa6.12□□□□□ -1.43
CDC27-215ENST00000573550 SEM1Q6ZVN7 128 aa6.12□□□□□ -1.43
CDC27-215ENST00000573550 MIGA2Q7L4E1 593 aa6.12□□□□□ -1.43
CDC27-215ENST00000573550 RHOT1Q8IXI2 618 aa6.12□□□□□ -1.43
CDC27-215ENST00000573550 ZNF276Q8N554 614 aa6.12□□□□□ -1.43
CDC27-215ENST00000573550 MYO3AQ8NEV4 1616 aa6.12□□□□□ -1.43
CDC27-215ENST00000573550 PNISRQ8TF01 805 aaKnown RBP6.12□□□□□ -1.43
CDC27-215ENST00000573550 MYOCQ99972 504 aa6.12□□□□□ -1.43
CDC27-215ENST00000573550 SCAND2PQ9GZW5 306 aaPredicted RBP6.12□□□□□ -1.43
CDC27-215ENST00000573550 ZNF768Q9H5H4 540 aaKnown RBP6.12□□□□□ -1.43
CDC27-215ENST00000573550 SLC2A4RGQ9NR83 387 aa6.12□□□□□ -1.43
CDC27-215ENST00000573550 DDX56Q9NY93 547 aaKnown RBP6.12□□□□□ -1.43
CDC27-215ENST00000573550 POGKQ9P215 609 aa6.12□□□□□ -1.43
CDC27-215ENST00000573550 EIF2B4Q9UI10 523 aaKnown RBP6.12□□□□□ -1.43
CDC27-215ENST00000573550 IFT172Q9UG01 1749 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 MYOM1P52179 1685 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 MYOM2P54296 1465 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 PTPRTO14522 1441 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 NPC1L1Q9UHC9 1359 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 CCDC154A6NI56 674 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 RECQL4O94761 1208 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 ATP5JP18859 108 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 NCLP19338 710 aaKnown RBP6.11□□□□□ -1.43
CDC27-215ENST00000573550 DDCP20711 480 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 RECQLP46063 649 aaPredicted RBP6.11□□□□□ -1.43
CDC27-215ENST00000573550 NEK2P51955 445 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 IGBP1P78318 339 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 CDC42EP1Q00587 391 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 CCDC184Q52MB2 194 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 TMEM240Q5SV17 173 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 RHOUQ7L0Q8 258 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 GDF7Q7Z4P5 450 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 DRC7Q8IY82 874 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 ZNF483Q8TF39 744 aaPredicted RBP6.11□□□□□ -1.43
CDC27-215ENST00000573550 SLC25A43Q8WUT9 341 aaPredicted RBP6.11□□□□□ -1.43
CDC27-215ENST00000573550 RAB24Q969Q5 203 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 HDAC10Q969S8 669 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 CHMP4CQ96CF2 233 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 DCLRE1CQ96SD1 692 aaKnown RBP6.11□□□□□ -1.43
CDC27-215ENST00000573550 FAM30AQ9NZY2 134 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 PCDHA13Q9Y5I0 950 aa6.11□□□□□ -1.43
CDC27-215ENST00000573550 DRGXA6NNA5 263 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 ZNF185O15231 689 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 TEX33O43247 280 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 SGTAO43765 313 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 CCND1P24385 295 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 CHN2P52757 468 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 RNASE9P60153 205 aaKnown RBP6.1□□□□□ -1.43
CDC27-215ENST00000573550 RAP2BP61225 183 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 FAM189BP81408 668 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 IL10RAQ13651 578 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 ZBTB46Q86UZ6 589 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 PLXDC1Q8IUK5 500 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 CMTR2Q8IYT2 770 aaKnown RBP6.1□□□□□ -1.43
CDC27-215ENST00000573550 FAM9BQ8IZU0 186 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 DCBLD1Q8N8Z6 715 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 SLC16A11Q8NCK7 471 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 SLC46A2Q9BY10 475 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 TEX101Q9BY14 249 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 TMPRSS5Q9H3S3 457 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 MMRN2Q9H8L6 949 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 TRPM5Q9NZQ8 1165 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 RUVBL1Q9Y265 456 aaKnown RBP6.1□□□□□ -1.43
CDC27-215ENST00000573550 HS3ST3A1Q9Y663 406 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 KDM5AP29375 1690 aaKnown RBP6.1□□□□□ -1.43
CDC27-215ENST00000573550 CFAP74Q9C0B2 1584 aa6.1□□□□□ -1.43
CDC27-215ENST00000573550 DIRC3C9JPN6 131 aa6.09□□□□□ -1.43
CDC27-215ENST00000573550 AKAP8O43823 692 aaKnown RBP6.09□□□□□ -1.43
CDC27-215ENST00000573550 FSHBP01225 129 aa6.09□□□□□ -1.43
CDC27-215ENST00000573550 PDGFRBP09619 1106 aa6.09□□□□□ -1.43
CDC27-215ENST00000573550 DACT2Q5SW24 774 aa6.09□□□□□ -1.43
CDC27-215ENST00000573550 AGAP9Q5VTM2 703 aa6.09□□□□□ -1.43
CDC27-215ENST00000573550 ZNF529Q6P280 563 aa6.09□□□□□ -1.43
CDC27-215ENST00000573550 IFI44Q8TCB0 444 aa6.09□□□□□ -1.43
CDC27-215ENST00000573550 MRGPRX4Q96LA9 322 aa6.09□□□□□ -1.43
CDC27-215ENST00000573550 TDP1Q9NUW8 608 aa6.09□□□□□ -1.43
CDC27-215ENST00000573550 FBXO34Q9NWN3 711 aa6.09□□□□□ -1.43
CDC27-215ENST00000573550 CLTCL1P53675 1640 aa6.09□□□□□ -1.43
CDC27-215ENST00000573550 ATP7AQ04656 1500 aa6.09□□□□□ -1.44
CDC27-215ENST00000573550 LMTK2Q8IWU2 1503 aa6.09□□□□□ -1.44
CDC27-215ENST00000573550 SCAF11Q99590 1463 aaKnown RBP6.09□□□□□ -1.44
CDC27-215ENST00000573550 PIK3C2GO75747 1445 aa6.08□□□□□ -1.44
CDC27-215ENST00000573550 MROH1Q8NDA8 1641 aa6.08□□□□□ -1.44
CDC27-215ENST00000573550 USP32Q8NFA0 1604 aa6.08□□□□□ -1.44
CDC27-215ENST00000573550 RPS6KA4O75676 772 aa6.08□□□□□ -1.44
CDC27-215ENST00000573550 SNUPNO95149 360 aaKnown RBP6.08□□□□□ -1.44
CDC27-215ENST00000573550 PTGS2P35354 604 aa6.08□□□□□ -1.44
CDC27-215ENST00000573550 GDF5P43026 501 aa6.08□□□□□ -1.44
CDC27-215ENST00000573550 CTXN1P60606 82 aa6.08□□□□□ -1.44
CDC27-215ENST00000573550 ABHD18Q0P651 414 aa6.08□□□□□ -1.44
CDC27-215ENST00000573550 UAP1L1Q3KQV9 507 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms