RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 PBXIP1Q96AQ6 731 aa12.88□□□□□ -0.35
NDE1-206ENST00000572967 MRPL4Q9BYD3 311 aaKnown RBP12.88□□□□□ -0.35
NDE1-206ENST00000572967 CDT1Q9H211 546 aa12.88□□□□□ -0.35
NDE1-206ENST00000572967 GOLGA2P5Q9HBQ8 144 aa12.88□□□□□ -0.35
NDE1-206ENST00000572967 TBX20Q9UMR3 447 aa12.88□□□□□ -0.35
NDE1-206ENST00000572967 SSX2IPQ9Y2D8 614 aa12.88□□□□□ -0.35
NDE1-206ENST00000572967 DOCK8Q8NF50 2099 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 TADA2AO75478 443 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 PPP1R37O75864 691 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 PDGFBP01127 241 aaPredicted RBP12.87□□□□□ -0.35
NDE1-206ENST00000572967 RPL13P26373 211 aaKnown RBP12.87□□□□□ -0.35
NDE1-206ENST00000572967 NMT1P30419 496 aaKnown RBP12.87□□□□□ -0.35
NDE1-206ENST00000572967 LIG4P49917 911 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 MTMR3Q13615 1198 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 TPD52L1Q16890 204 aaPredicted RBP12.87□□□□□ -0.35
NDE1-206ENST00000572967 KNOP1Q1ED39 458 aaKnown RBP12.87□□□□□ -0.35
NDE1-206ENST00000572967 USP41Q3LFD5 358 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 DPCR1Q3MIW9 517 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 KIAA0319Q5VV43 1072 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 SLFN12LQ6IEE8 588 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 ZPBP2Q6X784 338 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 EPM2AIP1Q7L775 607 aaPredicted RBP12.87□□□□□ -0.35
NDE1-206ENST00000572967 GPR149Q86SP6 731 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 CEP57Q86XR8 500 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 SUGP1Q8IWZ8 645 aaKnown RBP12.87□□□□□ -0.35
NDE1-206ENST00000572967 ZNF507Q8TCN5 953 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 ASIC4Q96FT7 647 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 FIZ1Q96SL8 496 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 BPIFA3Q9BQP9 254 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 TARS2Q9BW92 718 aaKnown RBP12.87□□□□□ -0.35
NDE1-206ENST00000572967 CHST7Q9NS84 486 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 ANKFY1Q9P2R3 1169 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 RWDD2AQ9UIY3 292 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 SORCS3Q9UPU3 1222 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 TSC2P49815 1807 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 MYO10Q9HD67 2058 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 CLUHO75153 1309 aa12.87□□□□□ -0.35
NDE1-206ENST00000572967 SMTNL1A8MU46 457 aa12.86□□□□□ -0.35
NDE1-206ENST00000572967 BECN2A8MW95 431 aa12.86□□□□□ -0.35
NDE1-206ENST00000572967 PDXKO00764 312 aa12.86□□□□□ -0.35
NDE1-206ENST00000572967 PIGRP01833 764 aa12.86□□□□□ -0.35
NDE1-206ENST00000572967 CCNE1P24864 410 aa12.86□□□□□ -0.35
NDE1-206ENST00000572967 PRCPP42785 496 aa12.86□□□□□ -0.35
NDE1-206ENST00000572967 VCPP55072 806 aaKnown RBP12.86□□□□□ -0.35
NDE1-206ENST00000572967 MYBPC2Q14324 1141 aa12.86□□□□□ -0.35
NDE1-206ENST00000572967 NAB2Q15742 525 aa12.86□□□□□ -0.35
NDE1-206ENST00000572967 PSMD5Q16401 504 aa12.86□□□□□ -0.35
NDE1-206ENST00000572967 KYAT1Q16773 422 aa12.86□□□□□ -0.35
NDE1-206ENST00000572967 EDRF1Q3B7T1 1238 aa12.86□□□□□ -0.35
NDE1-206ENST00000572967 FAM171A1Q5VUB5 890 aa12.86□□□□□ -0.35
NDE1-206ENST00000572967 KLHL10Q6JEL2 608 aa12.86□□□□□ -0.35
NDE1-206ENST00000572967 ELMSAN1Q6PJG2 1045 aa12.86□□□□□ -0.35
NDE1-206ENST00000572967 NOC3LQ8WTT2 800 aaKnown RBP12.86□□□□□ -0.35
NDE1-206ENST00000572967 SCFD1Q8WVM8 642 aa12.86□□□□□ -0.35
NDE1-206ENST00000572967 NELFBQ8WX92 580 aa12.86□□□□□ -0.35
NDE1-206ENST00000572967 SMG7Q92540 1137 aaKnown RBP12.86□□□□□ -0.35
NDE1-206ENST00000572967 MFSD14AQ96MC6 490 aa12.86□□□□□ -0.35
NDE1-206ENST00000572967 ACO2Q99798 780 aaKnown RBP12.86□□□□□ -0.35
NDE1-206ENST00000572967 STRA6Q9BX79 667 aa12.86□□□□□ -0.35
NDE1-206ENST00000572967 RXFP1Q9HBX9 757 aa12.86□□□□□ -0.35
NDE1-206ENST00000572967 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.86□□□□□ -0.35
NDE1-206ENST00000572967 TNFSF13BQ9Y275 285 aa12.86□□□□□ -0.35
NDE1-206ENST00000572967 ARIH1Q9Y4X5 557 aaPredicted RBP12.86□□□□□ -0.35
NDE1-206ENST00000572967 ANK1P16157 1881 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 DOCK6Q96HP0 2047 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 CCDC195A0A1B0GUA6 201 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 TGM5O43548 720 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 PRPF6O94906 941 aaKnown RBP12.85□□□□□ -0.35
NDE1-206ENST00000572967 GRM5P41594 1212 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 ZNF165P49910 485 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 YARSP54577 528 aaKnown RBP12.85□□□□□ -0.35
NDE1-206ENST00000572967 MYL5Q02045 173 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 CREMQ03060 361 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 ANO6Q4KMQ2 910 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 ISM2Q6H9L7 571 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 C15orf39Q6ZRI6 1047 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 GET4Q7L5D6 327 aaPredicted RBP12.85□□□□□ -0.35
NDE1-206ENST00000572967 FAM114A1Q8IWE2 563 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 NELFCDQ8IXH7 590 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 FBXL6Q8N531 539 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 ANKRD20A12PQ8NF67 263 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 FAM200AQ8TCP9 573 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 HPS3Q969F9 1004 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 SNX27Q96L92 541 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 PPP1R10Q96QC0 940 aaKnown RBP12.85□□□□□ -0.35
NDE1-206ENST00000572967 TTPALQ9BTX7 342 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 CCDC94Q9BW85 323 aaPredicted RBP12.85□□□□□ -0.35
NDE1-206ENST00000572967 DNAJC25Q9H1X3 360 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 LIMD1Q9UGP4 676 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 CTNND2Q9UQB3 1225 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 TRAF3IP3Q9Y228 551 aa12.85□□□□□ -0.35
NDE1-206ENST00000572967 GOLGA6L19H0YKK7 550 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 I3L4J1 428 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 N4BP1O75113 896 aaKnown RBP12.84□□□□□ -0.35
NDE1-206ENST00000572967 TOM1L1O75674 476 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 GARTP22102 1010 aa12.84□□□□□ -0.35
NDE1-206ENST00000572967 IGFBP6P24592 240 aaPredicted RBP12.84□□□□□ -0.35
NDE1-206ENST00000572967 GBP2P32456 591 aaPredicted RBP12.84□□□□□ -0.35
NDE1-206ENST00000572967 MATR3P43243 847 aaKnown RBP eCLIP12.84□□□□□ -0.35
NDE1-206ENST00000572967 CLCNKBP51801 687 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms