RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 XPOTO43592 962 aaKnown RBP17.53■□□□□ 0.4
NDE1-205ENST00000572756 ACTN4O43707 911 aaKnown RBP17.53■□□□□ 0.4
NDE1-205ENST00000572756 NFICP08651 508 aa17.53■□□□□ 0.4
NDE1-205ENST00000572756 SLFN14P0C7P3 912 aa17.53■□□□□ 0.4
NDE1-205ENST00000572756 CASP1P29466 404 aa17.53■□□□□ 0.4
NDE1-205ENST00000572756 OR1D2P34982 312 aa17.53■□□□□ 0.4
NDE1-205ENST00000572756 HOXD13P35453 343 aa17.53■□□□□ 0.4
NDE1-205ENST00000572756 VARS2Q5ST30 1063 aaKnown RBP17.53■□□□□ 0.4
NDE1-205ENST00000572756 UNC13DQ70J99 1090 aa17.53■□□□□ 0.4
NDE1-205ENST00000572756 EPM2AIP1Q7L775 607 aaPredicted RBP17.53■□□□□ 0.4
NDE1-205ENST00000572756 ZSWIM2Q8NEG5 633 aa17.53■□□□□ 0.4
NDE1-205ENST00000572756 FAM212AQ96EL1 285 aa17.53■□□□□ 0.4
NDE1-205ENST00000572756 TMEM206Q9H813 350 aa17.53■□□□□ 0.4
NDE1-205ENST00000572756 ZDHHC7Q9NXF8 308 aa17.53■□□□□ 0.4
NDE1-205ENST00000572756 SERTAD1Q9UHV2 236 aa17.53■□□□□ 0.4
NDE1-205ENST00000572756 USTQ9Y2C2 406 aa17.53■□□□□ 0.4
NDE1-205ENST00000572756 C2CD2Q9Y426 696 aa17.53■□□□□ 0.4
NDE1-205ENST00000572756 NR2E1Q9Y466 385 aa17.53■□□□□ 0.4
NDE1-205ENST00000572756 ATP6V1DQ9Y5K8 247 aa17.53■□□□□ 0.4
NDE1-205ENST00000572756 TECTAO75443 2155 aa17.53■□□□□ 0.4
NDE1-205ENST00000572756 FAM237AA0A1B0GTK4 181 aa17.52■□□□□ 0.4
NDE1-205ENST00000572756 C2CD4DB7Z1M9 353 aa17.52■□□□□ 0.4
NDE1-205ENST00000572756 M0QZQ0 153 aa17.52■□□□□ 0.4
NDE1-205ENST00000572756 EIF3DO15371 548 aaKnown RBP eCLIP17.52■□□□□ 0.4
NDE1-205ENST00000572756 GPR37L1O60883 481 aa17.52■□□□□ 0.4
NDE1-205ENST00000572756 ZMYND10O75800 440 aa17.52■□□□□ 0.4
NDE1-205ENST00000572756 PFKFB1P16118 471 aa17.52■□□□□ 0.4
NDE1-205ENST00000572756 SP100P23497 879 aaPredicted RBP17.52■□□□□ 0.4
NDE1-205ENST00000572756 MCM4P33991 863 aa17.52■□□□□ 0.4
NDE1-205ENST00000572756 TMEM132DQ14C87 1099 aa17.52■□□□□ 0.4
NDE1-205ENST00000572756 FAM26FQ5R3K3 315 aa17.52■□□□□ 0.4
NDE1-205ENST00000572756 SLC8B1Q6J4K2 584 aa17.52■□□□□ 0.4
NDE1-205ENST00000572756 SYCP3Q8IZU3 236 aa17.52■□□□□ 0.4
NDE1-205ENST00000572756 BEST2Q8NFU1 509 aa17.52■□□□□ 0.4
NDE1-205ENST00000572756 CBWD1Q9BRT8 395 aa17.52■□□□□ 0.4
NDE1-205ENST00000572756 SCAND2PQ9GZW5 306 aaPredicted RBP17.52■□□□□ 0.4
NDE1-205ENST00000572756 BLZF1Q9H2G9 400 aa17.52■□□□□ 0.4
NDE1-205ENST00000572756 PCDHB8Q9UN66 801 aa17.52■□□□□ 0.4
NDE1-205ENST00000572756 CDY1Q9Y6F8 540 aa17.52■□□□□ 0.4
NDE1-205ENST00000572756 TSC2P49815 1807 aa17.51■□□□□ 0.39
NDE1-205ENST00000572756 A0A1B0GVL5 298 aa17.51■□□□□ 0.39
NDE1-205ENST00000572756 PVALEFA0A1B0GWK0 134 aa17.51■□□□□ 0.39
NDE1-205ENST00000572756 ANO9A1A5B4 782 aa17.51■□□□□ 0.39
NDE1-205ENST00000572756 PPEF2O14830 753 aa17.51■□□□□ 0.39
NDE1-205ENST00000572756 AFMP43652 599 aa17.51■□□□□ 0.39
NDE1-205ENST00000572756 WNT7BP56706 349 aa17.51■□□□□ 0.39
NDE1-205ENST00000572756 CUL4BQ13620 913 aa17.51■□□□□ 0.39
NDE1-205ENST00000572756 STXBP4Q6ZWJ1 553 aa17.51■□□□□ 0.39
NDE1-205ENST00000572756 BRSK2Q8IWQ3 736 aa17.51■□□□□ 0.39
NDE1-205ENST00000572756 EFCAB13Q8IY85 973 aa17.51■□□□□ 0.39
NDE1-205ENST00000572756 GRAMD1CQ8IYS0 662 aa17.51■□□□□ 0.39
NDE1-205ENST00000572756 ZNF507Q8TCN5 953 aa17.51■□□□□ 0.39
NDE1-205ENST00000572756 SAAL1Q96ER3 474 aa17.51■□□□□ 0.39
NDE1-205ENST00000572756 FAM213AQ9BRX8 229 aa17.51■□□□□ 0.39
NDE1-205ENST00000572756 PRKD2Q9BZL6 878 aa17.51■□□□□ 0.39
NDE1-205ENST00000572756 WDR6Q9NNW5 1121 aaKnown RBP17.51■□□□□ 0.39
NDE1-205ENST00000572756 TSHZ2Q9NRE2 1034 aa17.51■□□□□ 0.39
NDE1-205ENST00000572756 NOTCH4Q99466 2003 aa17.5■□□□□ 0.39
NDE1-205ENST00000572756 PIRO00625 290 aa17.5■□□□□ 0.39
NDE1-205ENST00000572756 KLRC4O43908 158 aa17.5■□□□□ 0.39
NDE1-205ENST00000572756 IL18RAPO95256 599 aa17.5■□□□□ 0.39
NDE1-205ENST00000572756 LDHAP00338 332 aaKnown RBP17.5■□□□□ 0.39
NDE1-205ENST00000572756 HOXA9P31269 272 aa17.5■□□□□ 0.39
NDE1-205ENST00000572756 ROR1Q01973 937 aa17.5■□□□□ 0.39
NDE1-205ENST00000572756 C9orf57Q5W0N0 161 aa17.5■□□□□ 0.39
NDE1-205ENST00000572756 CCDC149Q6ZUS6 474 aa17.5■□□□□ 0.39
NDE1-205ENST00000572756 CEP57L1Q8IYX8 460 aa17.5■□□□□ 0.39
NDE1-205ENST00000572756 ZDHHC14Q8IZN3 488 aa17.5■□□□□ 0.39
NDE1-205ENST00000572756 APPL2Q8NEU8 664 aa17.5■□□□□ 0.39
NDE1-205ENST00000572756 SMG7Q92540 1137 aaKnown RBP17.5■□□□□ 0.39
NDE1-205ENST00000572756 PAGE5Q96GU1 130 aa17.5■□□□□ 0.39
NDE1-205ENST00000572756 USP25Q9UHP3 1055 aa17.5■□□□□ 0.39
NDE1-205ENST00000572756 CLUHO75153 1309 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 UBE4BO95155 1302 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 A0A1W2PQ27 194 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 A0A1W2PQ64 194 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 A0A1W2PQD8 194 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 WDR27A2RRH5 827 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 FAM86C2PA6NEL3 165 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 H7C4K7 107 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 EXTL3O43909 919 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 ABLIM3O94929 683 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 C8AP07357 584 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 HNRNPA1P09651 372 aaKnown RBP eCLIP17.49■□□□□ 0.39
NDE1-205ENST00000572756 LILRA4P59901 499 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 TMEM31Q5JXX7 168 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 ARMCX5Q6P1M9 558 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 RTL10Q7L3V2 364 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 NT5DC4Q86YG4 428 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 TDRD5Q8NAT2 981 aaKnown RBP17.49■□□□□ 0.39
NDE1-205ENST00000572756 SCFD1Q8WVM8 642 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 EDAQ92838 391 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 LRFN3Q9BTN0 628 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 PCIF1Q9H4Z3 704 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 FBXL5Q9UKA1 691 aa17.49■□□□□ 0.39
NDE1-205ENST00000572756 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.48■□□□□ 0.39
NDE1-205ENST00000572756 GOLGA8IPA6NC78 632 aa17.48■□□□□ 0.39
NDE1-205ENST00000572756 GOLGA8JA6NMD2 632 aa17.48■□□□□ 0.39
NDE1-205ENST00000572756 KIAA0391O15091 583 aaKnown RBP17.48■□□□□ 0.39
NDE1-205ENST00000572756 SPTLC1O15269 473 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms