RNA–Protein interactions for RNA: ENST00000571714.5

NPLOC4-206, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-206ENST00000571714 CTXN3Q4LDR2 81 aa12.19□□□□□ -0.46
NPLOC4-206ENST00000571714 WDR44Q5JSH3 913 aa12.19□□□□□ -0.46
NPLOC4-206ENST00000571714 TTC38Q5R3I4 469 aa12.19□□□□□ -0.46
NPLOC4-206ENST00000571714 TPGS2Q68CL5 300 aa12.19□□□□□ -0.46
NPLOC4-206ENST00000571714 SMARCD2Q92925 531 aa12.19□□□□□ -0.46
NPLOC4-206ENST00000571714 RSPRY1Q96DX4 576 aa12.19□□□□□ -0.46
NPLOC4-206ENST00000571714 SUSD3Q96L08 255 aa12.19□□□□□ -0.46
NPLOC4-206ENST00000571714 RUSC1Q9BVN2 902 aa12.19□□□□□ -0.46
NPLOC4-206ENST00000571714 TRMT61BQ9BVS5 477 aaKnown RBP12.19□□□□□ -0.46
NPLOC4-206ENST00000571714 MRPL4Q9BYD3 311 aaKnown RBP12.19□□□□□ -0.46
NPLOC4-206ENST00000571714 TMEM134Q9H6X4 195 aa12.19□□□□□ -0.46
NPLOC4-206ENST00000571714 TRPV5Q9NQA5 729 aa12.19□□□□□ -0.46
NPLOC4-206ENST00000571714 DDX19AQ9NUU7 478 aaKnown RBP12.19□□□□□ -0.46
NPLOC4-206ENST00000571714 SLC38A7Q9NVC3 462 aa12.19□□□□□ -0.46
NPLOC4-206ENST00000571714 DAXXQ9UER7 740 aaPredicted RBP12.19□□□□□ -0.46
NPLOC4-206ENST00000571714 TUBGCP4Q9UGJ1 667 aa12.19□□□□□ -0.46
NPLOC4-206ENST00000571714 PIAS3Q9Y6X2 628 aa12.19□□□□□ -0.46
NPLOC4-206ENST00000571714 DCDC2BA2VCK2 349 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 CCDC169A6NNP5 214 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 PP2D1A8MPX8 630 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 PRR5-ARHGAP8B1AHC4 643 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 H7C4K7 107 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 MAN2B1O00754 1011 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 ZNF197O14709 1029 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 HIP1RO75146 1068 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 KRT37O76014 449 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 MCF2P10911 925 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 CHRNB1P11230 501 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 NEK4P51957 841 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 ARHGAP8P85298 464 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 SATB1Q01826 763 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 TEAD2Q15562 447 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 LPAL2Q16609 132 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 SEZ6Q53EL9 994 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 ZNF280DQ6N043 979 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 MPZL3Q6UWV2 235 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 RNF19BQ6ZMZ0 732 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 APBB1IPQ7Z5R6 666 aaPredicted RBP12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 IGSF22Q8N9C0 903 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 ZSCAN18Q8TBC5 510 aaPredicted RBP12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 FAM3CQ92520 227 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 DDX12PQ92771 950 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 IRF7Q92985 503 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 SECISBP2LQ93073 1101 aaKnown RBP12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 ZBTB45Q96K62 511 aaPredicted RBP12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 ACAP3Q96P50 834 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 LRRC3Q9BY71 257 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 FOXP1Q9H334 677 aaPredicted RBP12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 CRISPLD1Q9H336 500 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 LMAN1LQ9HAT1 526 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 TRPV4Q9HBA0 871 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 LRWD1Q9UFC0 647 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 AFF4Q9UHB7 1163 aaKnown RBP12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 CDV3Q9UKY7 258 aaKnown RBP12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 USP18Q9UMW8 372 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 NUB1Q9Y5A7 615 aa12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.18□□□□□ -0.46
NPLOC4-206ENST00000571714 HARSP12081 509 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 MYL4P12829 197 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 SDHBP21912 280 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 RPL9P32969 192 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 MCM4P33991 863 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 DMWDQ09019 674 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 SPEM2Q0P670 501 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 DMP1Q13316 513 aaPredicted RBP12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 SAFBQ15424 915 aaKnown RBP eCLIP12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 IL17AQ16552 155 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 SLC10A6Q3KNW5 377 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 CYP4A22Q5TCH4 519 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 KCNK18Q7Z418 384 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 TMC8Q8IU68 726 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 BEST2Q8NFU1 509 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 SHKBP1Q8TBC3 707 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 SNX29Q8TEQ0 813 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 DEPDC1BQ8WUY9 529 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 C8orf76Q96K31 380 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 TBC1D32Q96NH3 1257 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 RTKNQ9BST9 563 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 IER2Q9BTL4 223 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 DNAJC25Q9H1X3 360 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 KMT5AQ9NQR1 393 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 GMEB2Q9UKD1 530 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 YIPF1Q9Y548 306 aa12.17□□□□□ -0.46
NPLOC4-206ENST00000571714 TSC2P49815 1807 aa12.16□□□□□ -0.46
NPLOC4-206ENST00000571714 HEPACAM2A8MVW5 462 aa12.16□□□□□ -0.46
NPLOC4-206ENST00000571714 SLC16A4O15374 487 aa12.16□□□□□ -0.46
NPLOC4-206ENST00000571714 OR4Q2P0C623 313 aa12.16□□□□□ -0.46
NPLOC4-206ENST00000571714 CPB1P15086 417 aa12.16□□□□□ -0.46
NPLOC4-206ENST00000571714 CCNE1P24864 410 aa12.16□□□□□ -0.46
NPLOC4-206ENST00000571714 CDC25AP30304 524 aa12.16□□□□□ -0.46
NPLOC4-206ENST00000571714 HOXC13P31276 330 aa12.16□□□□□ -0.46
NPLOC4-206ENST00000571714 SOX9P48436 509 aa12.16□□□□□ -0.46
NPLOC4-206ENST00000571714 TOB1P50616 345 aaPredicted RBP12.16□□□□□ -0.46
NPLOC4-206ENST00000571714 CCR3P51677 355 aa12.16□□□□□ -0.46
NPLOC4-206ENST00000571714 SRSF5Q13243 272 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-206ENST00000571714 STXBP5Q5T5C0 1151 aa12.16□□□□□ -0.46
NPLOC4-206ENST00000571714 LAIR1Q6GTX8 287 aa12.16□□□□□ -0.46
NPLOC4-206ENST00000571714 IQCEQ6IPM2 695 aa12.16□□□□□ -0.46
NPLOC4-206ENST00000571714 RINT1Q6NUQ1 792 aa12.16□□□□□ -0.46
NPLOC4-206ENST00000571714 Q6ZS52 159 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms