RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 RIN2Q8WYP3 895 aaPredicted RBP7.57□□□□□ -1.2
SMG6-209ENST00000571442 DDX27Q96GQ7 796 aaKnown RBP7.57□□□□□ -1.2
SMG6-209ENST00000571442 MFSD14AQ96MC6 490 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 UHRF1Q96T88 793 aaPredicted RBP7.57□□□□□ -1.2
SMG6-209ENST00000571442 DUSP9Q99956 384 aaKnown RBP7.57□□□□□ -1.2
SMG6-209ENST00000571442 MTMR12Q9C0I1 747 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 ASB7Q9H672 318 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 TLE6Q9H808 572 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 SLC38A7Q9NVC3 462 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 INTS13Q9NVM9 706 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 DPP3Q9NY33 737 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 PUF60Q9UHX1 559 aaKnown RBP7.57□□□□□ -1.2
SMG6-209ENST00000571442 BARX2Q9UMQ3 279 aaPredicted RBP7.57□□□□□ -1.2
SMG6-209ENST00000571442 C2CD2Q9Y426 696 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 TIMM13Q9Y5L4 95 aaPredicted RBP7.57□□□□□ -1.2
SMG6-209ENST00000571442 HCFC2Q9Y5Z7 792 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 IRAK3Q9Y616 596 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 C2orf16Q68DN1 1984 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 MTCL1Q9Y4B5 1905 aaKnown RBP7.56□□□□□ -1.2
SMG6-209ENST00000571442 ZNF233A6NK53 670 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 LRRIQ3A6PVS8 624 aaPredicted RBP7.56□□□□□ -1.2
SMG6-209ENST00000571442 HCRTO43612 131 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 TBC1D4O60343 1298 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 EXOC3O60645 756 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 LRRN2O75325 713 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 IL18RAPO95256 599 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 SMC2O95347 1197 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 CST3P01034 146 aaPredicted RBP7.56□□□□□ -1.2
SMG6-209ENST00000571442 ITGB3P05106 788 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 DLATP10515 647 aaKnown RBP7.56□□□□□ -1.2
SMG6-209ENST00000571442 POLR2BP30876 1174 aaKnown RBP7.56□□□□□ -1.2
SMG6-209ENST00000571442 RPL9P32969 192 aaKnown RBP7.56□□□□□ -1.2
SMG6-209ENST00000571442 CA8P35219 290 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 GLUD2P49448 558 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 KCNQ1P51787 676 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 CDR1P51861 262 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 STX17P56962 302 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 SNRPFP62306 86 aaKnown RBP7.56□□□□□ -1.2
SMG6-209ENST00000571442 TFAMQ00059 246 aaKnown RBP7.56□□□□□ -1.2
SMG6-209ENST00000571442 POU5F1Q01860 360 aaKnown RBP7.56□□□□□ -1.2
SMG6-209ENST00000571442 PSMD6Q15008 389 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 CLUL1Q15846 466 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 NFIL3Q16649 462 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 CEP135Q66GS9 1140 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 SYCE2Q6PIF2 218 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 HS2ST1Q7LGA3 356 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 CEP57Q86XR8 500 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 CD302Q8IX05 232 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 ZC3H3Q8IXZ2 948 aaKnown RBP7.56□□□□□ -1.2
SMG6-209ENST00000571442 EFHBQ8N7U6 833 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 BEST2Q8NFU1 509 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.56□□□□□ -1.2
SMG6-209ENST00000571442 PARD3BQ8TEW8 1205 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 TMEM174Q8WUU8 243 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 CCDC127Q96BQ5 260 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 PABPC5Q96DU9 382 aaKnown RBP7.56□□□□□ -1.2
SMG6-209ENST00000571442 MSLNLQ96KJ4 702 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 SUSD3Q96L08 255 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 UROC1Q96N76 676 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 GBP4Q96PP9 640 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 ASB2Q96Q27 587 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 TMEM209Q96SK2 561 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 CGRRF1Q99675 332 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 CLSTN3Q9BQT9 956 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 UBE2ZQ9H832 354 aaPredicted RBP7.56□□□□□ -1.2
SMG6-209ENST00000571442 RXFP1Q9HBX9 757 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 NGRNQ9NPE2 291 aaKnown RBP7.56□□□□□ -1.2
SMG6-209ENST00000571442 CLDND1Q9NY35 253 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 KIAA1468Q9P260 1216 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 DERAQ9Y315 318 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 NME7Q9Y5B8 376 aa7.56□□□□□ -1.2
SMG6-209ENST00000571442 SF3B1O75533 1304 aaKnown RBP eCLIP7.55□□□□□ -1.2
SMG6-209ENST00000571442 GRXCR2A6NFK2 248 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 M0QZQ0 153 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 KIAA0391O15091 583 aaKnown RBP7.55□□□□□ -1.2
SMG6-209ENST00000571442 CALUO43852 315 aaPredicted RBP7.55□□□□□ -1.2
SMG6-209ENST00000571442 VNN1O95497 513 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 VNN2O95498 520 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 C4BPAP04003 597 aaKnown RBP7.55□□□□□ -1.2
SMG6-209ENST00000571442 URODP06132 367 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 SPATA31D3P0C874 917 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 TRIM49P0CI25 452 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 TRIM49CP0CI26 452 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 KCNA5P22460 613 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 NR2F2P24468 414 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 CCNE1P24864 410 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 MCM4P33991 863 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 CLCN4P51793 760 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 LILRA4P59901 499 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 ADAM9Q13443 819 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 MRPL58Q14197 206 aaKnown RBP7.55□□□□□ -1.2
SMG6-209ENST00000571442 PSMD5Q16401 504 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 CCDC142Q17RM4 750 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 AAK1Q2M2I8 961 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 USP41Q3LFD5 358 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 DPCR1Q3MIW9 517 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 VARS2Q5ST30 1063 aaKnown RBP7.55□□□□□ -1.2
SMG6-209ENST00000571442 KLHL10Q6JEL2 608 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 PDE12Q6L8Q7 609 aaKnown RBP7.55□□□□□ -1.2
SMG6-209ENST00000571442 TTI2Q6NXR4 508 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms