RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 IGSF9Q9P2J2 1179 aa32.98■■■□□ 2.87
CTDNEP1-206ENST00000571409 STYXL1Q9Y6J8 313 aa32.98■■■□□ 2.87
CTDNEP1-206ENST00000571409 TBC1D4O60343 1298 aa32.97■■■□□ 2.87
CTDNEP1-206ENST00000571409 XYLBO75191 536 aa32.97■■■□□ 2.87
CTDNEP1-206ENST00000571409 F13A1P00488 732 aa32.97■■■□□ 2.87
CTDNEP1-206ENST00000571409 PDGFBP01127 241 aaPredicted RBP32.97■■■□□ 2.87
CTDNEP1-206ENST00000571409 ACOT2P49753 483 aa32.97■■■□□ 2.87
CTDNEP1-206ENST00000571409 GUCY2FP51841 1108 aa32.97■■■□□ 2.87
CTDNEP1-206ENST00000571409 ARPP19P56211 112 aa32.97■■■□□ 2.87
CTDNEP1-206ENST00000571409 TDGQ13569 410 aa32.97■■■□□ 2.87
CTDNEP1-206ENST00000571409 JADE1Q6IE81 842 aa32.97■■■□□ 2.87
CTDNEP1-206ENST00000571409 CD302Q8IX05 232 aa32.97■■■□□ 2.87
CTDNEP1-206ENST00000571409 APPL2Q8NEU8 664 aa32.97■■■□□ 2.87
CTDNEP1-206ENST00000571409 ZNF461Q8TAF7 563 aa32.97■■■□□ 2.87
CTDNEP1-206ENST00000571409 KCNH6Q9H252 994 aa32.97■■■□□ 2.87
CTDNEP1-206ENST00000571409 FBXL5Q9UKA1 691 aa32.97■■■□□ 2.87
CTDNEP1-206ENST00000571409 GCNT3O95395 438 aa32.96■■■□□ 2.87
CTDNEP1-206ENST00000571409 FSHRP23945 695 aa32.96■■■□□ 2.87
CTDNEP1-206ENST00000571409 NTHL1P78549 312 aa32.96■■■□□ 2.87
CTDNEP1-206ENST00000571409 CTXN3Q4LDR2 81 aa32.96■■■□□ 2.87
CTDNEP1-206ENST00000571409 OLFML3Q9NRN5 406 aa32.96■■■□□ 2.87
CTDNEP1-206ENST00000571409 AGO2Q9UKV8 859 aaKnown RBP32.96■■■□□ 2.87
CTDNEP1-206ENST00000571409 PCDHB8Q9UN66 801 aa32.96■■■□□ 2.87
CTDNEP1-206ENST00000571409 WDR27A2RRH5 827 aa32.95■■■□□ 2.87
CTDNEP1-206ENST00000571409 KCNA1Q09470 495 aa32.95■■■□□ 2.87
CTDNEP1-206ENST00000571409 L1TD1Q5T7N2 865 aaKnown RBP32.95■■■□□ 2.87
CTDNEP1-206ENST00000571409 SPATA1Q5VX52 437 aa32.95■■■□□ 2.87
CTDNEP1-206ENST00000571409 ZNF280DQ6N043 979 aa32.95■■■□□ 2.87
CTDNEP1-206ENST00000571409 RTL10Q7L3V2 364 aa32.95■■■□□ 2.87
CTDNEP1-206ENST00000571409 BEST2Q8NFU1 509 aa32.95■■■□□ 2.87
CTDNEP1-206ENST00000571409 POMGNT1Q8WZA1 660 aa32.95■■■□□ 2.87
CTDNEP1-206ENST00000571409 PANK4Q9NVE7 773 aa32.95■■■□□ 2.87
CTDNEP1-206ENST00000571409 EXOC7Q9UPT5 735 aa32.95■■■□□ 2.87
CTDNEP1-206ENST00000571409 ZNF318Q5VUA4 2279 aa32.95■■■□□ 2.87
CTDNEP1-206ENST00000571409 DOCK8Q8NF50 2099 aa32.95■■■□□ 2.86
CTDNEP1-206ENST00000571409 KMT2EQ8IZD2 1858 aa32.95■■■□□ 2.86
CTDNEP1-206ENST00000571409 FRMD3A2A2Y4 597 aa32.94■■■□□ 2.86
CTDNEP1-206ENST00000571409 CUTAO60888 179 aa32.94■■■□□ 2.86
CTDNEP1-206ENST00000571409 ABLIM3O94929 683 aa32.94■■■□□ 2.86
CTDNEP1-206ENST00000571409 NFICP08651 508 aa32.94■■■□□ 2.86
CTDNEP1-206ENST00000571409 POU2F2P09086 479 aa32.94■■■□□ 2.86
CTDNEP1-206ENST00000571409 LAMP2P13473 410 aa32.94■■■□□ 2.86
CTDNEP1-206ENST00000571409 RSAD2Q8WXG1 361 aa32.94■■■□□ 2.86
CTDNEP1-206ENST00000571409 ACCSQ96QU6 501 aa32.94■■■□□ 2.86
CTDNEP1-206ENST00000571409 ANK1P16157 1881 aa32.94■■■□□ 2.86
CTDNEP1-206ENST00000571409 M0QZQ0 153 aa32.93■■■□□ 2.86
CTDNEP1-206ENST00000571409 ELF1P32519 619 aa32.93■■■□□ 2.86
CTDNEP1-206ENST00000571409 CASP5P51878 434 aa32.93■■■□□ 2.86
CTDNEP1-206ENST00000571409 TMEM132DQ14C87 1099 aa32.93■■■□□ 2.86
CTDNEP1-206ENST00000571409 E2F4Q16254 413 aa32.93■■■□□ 2.86
CTDNEP1-206ENST00000571409 HCFC1R1Q9NWW0 138 aa32.93■■■□□ 2.86
CTDNEP1-206ENST00000571409 DUSP12Q9UNI6 340 aa32.93■■■□□ 2.86
CTDNEP1-206ENST00000571409 PCDHB13Q9Y5F0 798 aa32.93■■■□□ 2.86
CTDNEP1-206ENST00000571409 DOCK6Q96HP0 2047 aa32.93■■■□□ 2.86
CTDNEP1-206ENST00000571409 PPEF2O14830 753 aa32.92■■■□□ 2.86
CTDNEP1-206ENST00000571409 ATF2P15336 505 aa32.92■■■□□ 2.86
CTDNEP1-206ENST00000571409 ADSSP30520 456 aa32.92■■■□□ 2.86
CTDNEP1-206ENST00000571409 AARSP49588 968 aaKnown RBP eCLIP32.92■■■□□ 2.86
CTDNEP1-206ENST00000571409 VCPP55072 806 aaKnown RBP32.92■■■□□ 2.86
CTDNEP1-206ENST00000571409 PKP1Q13835 747 aa32.92■■■□□ 2.86
CTDNEP1-206ENST00000571409 POSTNQ15063 836 aa32.92■■■□□ 2.86
CTDNEP1-206ENST00000571409 SHC4Q6S5L8 630 aa32.92■■■□□ 2.86
CTDNEP1-206ENST00000571409 FGFBP2Q9BYJ0 223 aa32.92■■■□□ 2.86
CTDNEP1-206ENST00000571409 TNMDQ9H2S6 317 aa32.92■■■□□ 2.86
CTDNEP1-206ENST00000571409 ASB7Q9H672 318 aa32.92■■■□□ 2.86
CTDNEP1-206ENST00000571409 DERAQ9Y315 318 aa32.92■■■□□ 2.86
CTDNEP1-206ENST00000571409 PRRG1O14668 218 aa32.91■■■□□ 2.86
CTDNEP1-206ENST00000571409 DSTYKQ6XUX3 929 aa32.91■■■□□ 2.86
CTDNEP1-206ENST00000571409 CCDC65Q8IXS2 484 aa32.91■■■□□ 2.86
CTDNEP1-206ENST00000571409 DHX58Q96C10 678 aa32.91■■■□□ 2.86
CTDNEP1-206ENST00000571409 DNMT3BQ9UBC3 853 aaKnown RBP32.91■■■□□ 2.86
CTDNEP1-206ENST00000571409 TIMM13Q9Y5L4 95 aaPredicted RBP32.91■■■□□ 2.86
CTDNEP1-206ENST00000571409 YWHAHQ04917 246 aaPredicted RBP32.9■■■□□ 2.86
CTDNEP1-206ENST00000571409 ALCAMQ13740 583 aa32.9■■■□□ 2.86
CTDNEP1-206ENST00000571409 IER5LQ5T953 404 aa32.9■■■□□ 2.86
CTDNEP1-206ENST00000571409 TPGS2Q68CL5 300 aa32.9■■■□□ 2.86
CTDNEP1-206ENST00000571409 CRELD2Q6UXH1 353 aaPredicted RBP32.9■■■□□ 2.86
CTDNEP1-206ENST00000571409 KCNG4Q8TDN1 519 aa32.9■■■□□ 2.86
CTDNEP1-206ENST00000571409 NXPE3Q969Y0 559 aa32.9■■■□□ 2.86
CTDNEP1-206ENST00000571409 LRRC27Q9C0I9 530 aa32.9■■■□□ 2.86
CTDNEP1-206ENST00000571409 CUEDC2Q9H467 287 aa32.9■■■□□ 2.86
CTDNEP1-206ENST00000571409 CYP4F11Q9HBI6 524 aa32.9■■■□□ 2.86
CTDNEP1-206ENST00000571409 KBTBD4Q9NVX7 518 aa32.9■■■□□ 2.86
CTDNEP1-206ENST00000571409 ZFP37Q9Y6Q3 630 aaPredicted RBP32.9■■■□□ 2.86
CTDNEP1-206ENST00000571409 ARHGEF37A1IGU5 675 aa32.89■■■□□ 2.86
CTDNEP1-206ENST00000571409 NARSO43776 548 aaKnown RBP32.89■■■□□ 2.86
CTDNEP1-206ENST00000571409 LRG1P02750 347 aa32.89■■■□□ 2.86
CTDNEP1-206ENST00000571409 AVPR2P30518 371 aa32.89■■■□□ 2.86
CTDNEP1-206ENST00000571409 PABPC1LQ4VXU2 614 aaKnown RBP32.89■■■□□ 2.86
CTDNEP1-206ENST00000571409 C9orf57Q5W0N0 161 aa32.89■■■□□ 2.86
CTDNEP1-206ENST00000571409 SYCP3Q8IZU3 236 aa32.89■■■□□ 2.86
CTDNEP1-206ENST00000571409 SLC44A3Q8N4M1 653 aa32.89■■■□□ 2.86
CTDNEP1-206ENST00000571409 CDH7Q9ULB5 785 aa32.89■■■□□ 2.86
CTDNEP1-206ENST00000571409 C2CD2Q9Y426 696 aa32.89■■■□□ 2.86
CTDNEP1-206ENST00000571409 SEC24AO95486 1093 aa32.88■■■□□ 2.85
CTDNEP1-206ENST00000571409 CPB1P15086 417 aa32.88■■■□□ 2.85
CTDNEP1-206ENST00000571409 LILRA4P59901 499 aa32.88■■■□□ 2.85
CTDNEP1-206ENST00000571409 POU5F1Q01860 360 aaKnown RBP32.88■■■□□ 2.85
CTDNEP1-206ENST00000571409 USP37Q86T82 979 aa32.88■■■□□ 2.85
CTDNEP1-206ENST00000571409 TCEAL8Q8IYN2 117 aa32.88■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms