RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 USP41Q3LFD5 358 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 LIN9Q5TKA1 542 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 CYP26C1Q6V0L0 522 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 SPATA31D4Q6ZUB0 917 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 MAEAQ7L5Y9 396 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 ASCL5Q7RTU5 278 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 TAS1R1Q7RTX1 841 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 FRMD5Q7Z6J6 570 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 CDR2LQ86X02 465 aaPredicted RBP7.18□□□□□ -1.26
SMG6-204ENST00000570606 PALB2Q86YC2 1186 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 DIS3L2Q8IYB7 885 aaKnown RBP7.18□□□□□ -1.26
SMG6-204ENST00000570606 CCDC105Q8IYK2 499 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 LINC00528Q8N1L1 170 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 NECAB1Q8N987 351 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 PIGOQ8TEQ8 1089 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 HASPINQ8TF76 798 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 RIN2Q8WYP3 895 aaPredicted RBP7.18□□□□□ -1.26
SMG6-204ENST00000570606 GTF3C6Q969F1 213 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 NKD2Q969F2 451 aaPredicted RBP7.18□□□□□ -1.26
SMG6-204ENST00000570606 B3GALT6Q96L58 329 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 RTP3Q9BQQ7 232 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 PLEKHA4Q9H4M7 779 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 TTC12Q9H892 705 aaPredicted RBP7.18□□□□□ -1.26
SMG6-204ENST00000570606 PRMT7Q9NVM4 692 aaPredicted RBP7.18□□□□□ -1.26
SMG6-204ENST00000570606 MIOSQ9NXC5 875 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 KLK14Q9P0G3 267 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 CA14Q9ULX7 337 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 PCDHA12Q9UN75 941 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 MYH11P35749 1972 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 OTOGLQ3ZCN5 2332 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 ZNF292O60281 2723 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 FANCMQ8IYD8 2048 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 ANKRD33BA6NCL7 494 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 CASTOR2A6NHX0 329 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 N4BP3O15049 544 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 TGM5O43548 720 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 N4BP1O75113 896 aaKnown RBP7.17□□□□□ -1.26
SMG6-204ENST00000570606 TADA2AO75478 443 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 LARGE1O95461 756 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 SRFP11831 508 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 LIG1P18858 919 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 ATP2B1P20020 1258 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 MAPK1P28482 360 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 ARL2P36404 184 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 TXKP42681 527 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 ANAPC15P60006 121 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 HSP90AA2PQ14568 343 aaPredicted RBP7.17□□□□□ -1.26
SMG6-204ENST00000570606 ANGPT1Q15389 498 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 SAFBQ15424 915 aaKnown RBP eCLIP7.17□□□□□ -1.26
SMG6-204ENST00000570606 KIAA0319Q5VV43 1072 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 CEP57Q86XR8 500 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 RNF168Q8IYW5 571 aaPredicted RBP7.17□□□□□ -1.26
SMG6-204ENST00000570606 ALDH16A1Q8IZ83 802 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 DTWD2Q8NBA8 298 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 NSUN7Q8NE18 718 aaKnown RBP7.17□□□□□ -1.26
SMG6-204ENST00000570606 MCPH1Q8NEM0 835 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 ERMNQ8TAM6 284 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 HDAC7Q8WUI4 952 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 RSAD2Q8WXG1 361 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 RABGGTAQ92696 567 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 TNFRSF25Q93038 417 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 SNX27Q96L92 541 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 ASB16Q96NS5 453 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 MYADMQ96S97 322 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 INSM2Q96T92 566 aaPredicted RBP7.17□□□□□ -1.26
SMG6-204ENST00000570606 ADPGKQ9BRR6 497 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 NFKBIZQ9BYH8 718 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 RHOBTB2Q9BYZ6 727 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 GPR62Q9BZJ7 368 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 TBC1D17Q9HA65 648 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 RXFP1Q9HBX9 757 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 GPRC5CQ9NQ84 441 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 ZDHHC7Q9NXF8 308 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 STIM2Q9P246 746 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 EPS15L1Q9UBC2 864 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 CACNG4Q9UBN1 327 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 CACNA1AO00555 2505 aa7.17□□□□□ -1.26
SMG6-204ENST00000570606 ARHGEF35A5YM69 484 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 BTBD18B2RXH4 712 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 CAPN5O15484 640 aaPredicted RBP7.16□□□□□ -1.26
SMG6-204ENST00000570606 PI15O43692 258 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 JAK2O60674 1132 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 RECQL4O94761 1208 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 KIF4AO95239 1232 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 PRKCBP05771 671 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 FDPSP14324 419 aaKnown RBP7.16□□□□□ -1.26
SMG6-204ENST00000570606 MCM7P33993 719 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 TUSC3Q13454 348 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 PRPF4BQ13523 1007 aaKnown RBP7.16□□□□□ -1.26
SMG6-204ENST00000570606 PSMD5Q16401 504 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 MAPK6Q16659 721 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 ME3Q16798 604 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 SPECC1Q5M775 1068 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 RTP2Q5QGT7 225 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 CDCA2Q69YH5 1023 aaPredicted RBP7.16□□□□□ -1.26
SMG6-204ENST00000570606 TMEM214Q6NUQ4 689 aaKnown RBP7.16□□□□□ -1.26
SMG6-204ENST00000570606 PRSS55Q6UWB4 352 aaPredicted RBP7.16□□□□□ -1.26
SMG6-204ENST00000570606 DEPTORQ8TB45 409 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 KCNG4Q8TDN1 519 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 GPR152Q8TDT2 470 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms