RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 PRKCQQ04759 706 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 TWF1Q12792 350 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 NOLC1Q14978 699 aaKnown RBP eCLIP9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 FAM78AQ5JUQ0 283 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 ZBTB41Q5SVQ8 909 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 RNF19BQ6ZMZ0 732 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 TMEM161BQ8NDZ6 487 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 DDX12PQ92771 950 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 BICD1Q96G01 975 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 CDK5RAP3Q96JB5 506 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 ZSWIM3Q96MP5 696 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 PGLYRP2Q96PD5 576 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 DDX23Q9BUQ8 820 aaKnown RBP9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 HAPLN2Q9GZV7 340 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 CEP72Q9P209 647 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 NDRG2Q9UN36 371 aaKnown RBP9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 MYH11P35749 1972 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 SDK1Q7Z5N4 2213 aa9.4□□□□□ -0.91
CTDNEP1-203ENST00000570385 WDR87Q6ZQQ6 2873 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 H3BQV1 296 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 LAD1O00515 517 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 CLDN3O15551 220 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 ECI2O75521 394 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 TOM1L1O75674 476 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 FCARP24071 287 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 GUCY2CP25092 1073 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 PRPHP41219 470 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 TNFSF9P41273 254 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 VIPR2P41587 438 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 SMTNP53814 917 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 SLC12A3P55017 1021 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 ATP2C1P98194 919 aaPredicted RBP9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 MRPL58Q14197 206 aaKnown RBP9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 C8orf34Q49A92 452 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 PRSS36Q5K4E3 855 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 CYP4A22Q5TCH4 519 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 ZNF280DQ6N043 979 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 ZC3H14Q6PJT7 736 aaKnown RBP9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 PDZD4Q76G19 769 aaPredicted RBP9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 RTL10Q7L3V2 364 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 TCEAL8Q8IYN2 117 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 SYT2Q8N9I0 419 aaPredicted RBP9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 SPIRE2Q8WWL2 714 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 RMDN1Q96DB5 314 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 FAM212AQ96EL1 285 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 KIF12Q96FN5 646 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 SUSD3Q96L08 255 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 NTPCRQ9BSD7 190 aaKnown RBP9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 SEMA4AQ9H3S1 761 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 BRD9Q9H8M2 597 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 C17orf75Q9HAS0 396 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 ZFP14Q9HCL3 533 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 GDE1Q9NZC3 331 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 NCOR2Q9Y618 2525 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 ZNF292O60281 2723 aa9.39□□□□□ -0.91
CTDNEP1-203ENST00000570385 FANCMQ8IYD8 2048 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 SHISA7A6NL88 538 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 LACTBL1A8MY62 500 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 TULP1O00294 542 aaPredicted RBP9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 PPEF2O14830 753 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 KINO60870 393 aaKnown RBP9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 MOSPD3O75425 235 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 CD2BP2O95400 341 aaKnown RBP9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 CLTAP09496 248 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 GJB2P29033 226 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 GDI1P31150 447 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 MCL1Q07820 350 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 TEAD2Q15562 447 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 RILPL1Q5EBL4 403 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 ARSHQ5FYA8 562 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 ERICH6BQ5W0A0 696 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 TPGS2Q68CL5 300 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 IQCEQ6IPM2 695 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 ZPBP2Q6X784 338 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 ZNF852Q6ZMS4 543 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 HAUS6Q7Z4H7 955 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 ELMOD1Q8N336 334 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 APPL2Q8NEU8 664 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 LRRC15Q8TF66 581 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 ELSPBP1Q96BH3 223 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 TMX3Q96JJ7 454 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 ZNF512Q96ME7 567 aaPredicted RBP9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 ASB16Q96NS5 453 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 REEP2Q9BRK0 252 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 TRMT61BQ9BVS5 477 aaKnown RBP9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 CRISPLD1Q9H336 500 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 ZHX3Q9H4I2 956 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 SLITRK6Q9H5Y7 841 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 AFF4Q9UHB7 1163 aaKnown RBP9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 PCDHB8Q9UN66 801 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 SLC27A5Q9Y2P5 690 aa9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 TPRP12270 2363 aaKnown RBP9.38□□□□□ -0.91
CTDNEP1-203ENST00000570385 NCANO14594 1321 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 ZNF197O14709 1029 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 SOAT2O75908 522 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 VNN2O95498 520 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 LIG4P49917 911 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 YWHAHQ04917 246 aaPredicted RBP9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 GRIN1Q05586 938 aa9.37□□□□□ -0.91
CTDNEP1-203ENST00000570385 PPP2R3AQ06190 1150 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms