RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 PCDHB8Q9UN66 801 aa18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 DERAQ9Y315 318 aa18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 LACTBL1A8MY62 500 aa18.59■□□□□ 0.57
MAP1LC3B-208ENST00000570189 OAZ2O95190 189 aa18.59■□□□□ 0.57
MAP1LC3B-208ENST00000570189 MYBP10242 640 aa18.59■□□□□ 0.57
MAP1LC3B-208ENST00000570189 FSHRP23945 695 aa18.59■□□□□ 0.57
MAP1LC3B-208ENST00000570189 NMT1P30419 496 aaKnown RBP18.59■□□□□ 0.57
MAP1LC3B-208ENST00000570189 MATR3P43243 847 aaKnown RBP eCLIP18.59■□□□□ 0.57
MAP1LC3B-208ENST00000570189 SPECC1Q5M775 1068 aa18.59■□□□□ 0.57
MAP1LC3B-208ENST00000570189 RRAGBQ5VZM2 374 aa18.59■□□□□ 0.57
MAP1LC3B-208ENST00000570189 ZNF280DQ6N043 979 aa18.59■□□□□ 0.57
MAP1LC3B-208ENST00000570189 CCDC73Q6ZRK6 1079 aa18.59■□□□□ 0.57
MAP1LC3B-208ENST00000570189 SV2BQ7L1I2 683 aa18.59■□□□□ 0.57
MAP1LC3B-208ENST00000570189 DDX12PQ92771 950 aa18.59■□□□□ 0.57
MAP1LC3B-208ENST00000570189 CLIC6Q96NY7 704 aa18.59■□□□□ 0.57
MAP1LC3B-208ENST00000570189 MSTO1Q9BUK6 570 aa18.59■□□□□ 0.57
MAP1LC3B-208ENST00000570189 IRF2BPLQ9H1B7 796 aa18.59■□□□□ 0.57
MAP1LC3B-208ENST00000570189 RPF1Q9H9Y2 349 aaKnown RBP18.59■□□□□ 0.57
MAP1LC3B-208ENST00000570189 FBXL5Q9UKA1 691 aa18.59■□□□□ 0.57
MAP1LC3B-208ENST00000570189 CDH7Q9ULB5 785 aa18.59■□□□□ 0.57
MAP1LC3B-208ENST00000570189 SCN1AP35498 2009 aa18.58■□□□□ 0.56
MAP1LC3B-208ENST00000570189 WDR27A2RRH5 827 aa18.58■□□□□ 0.56
MAP1LC3B-208ENST00000570189 PPP6R2O75170 966 aa18.58■□□□□ 0.56
MAP1LC3B-208ENST00000570189 SRFP11831 508 aa18.58■□□□□ 0.56
MAP1LC3B-208ENST00000570189 MCM4P33991 863 aa18.58■□□□□ 0.56
MAP1LC3B-208ENST00000570189 TCF15Q12870 199 aa18.58■□□□□ 0.56
MAP1LC3B-208ENST00000570189 SPATA1Q5VX52 437 aa18.58■□□□□ 0.56
MAP1LC3B-208ENST00000570189 ASTLQ6HA08 431 aaPredicted RBP18.58■□□□□ 0.56
MAP1LC3B-208ENST00000570189 GET4Q7L5D6 327 aaPredicted RBP18.58■□□□□ 0.56
MAP1LC3B-208ENST00000570189 GRASPQ7Z6J2 395 aaPredicted RBP18.58■□□□□ 0.56
MAP1LC3B-208ENST00000570189 SLC44A3Q8N4M1 653 aa18.58■□□□□ 0.56
MAP1LC3B-208ENST00000570189 LINC00301Q8NCQ3 95 aa18.58■□□□□ 0.56
MAP1LC3B-208ENST00000570189 BEST2Q8NFU1 509 aa18.58■□□□□ 0.56
MAP1LC3B-208ENST00000570189 KIF12Q96FN5 646 aa18.58■□□□□ 0.56
MAP1LC3B-208ENST00000570189 ASB7Q9H672 318 aa18.58■□□□□ 0.56
MAP1LC3B-208ENST00000570189 C2CD2Q9Y426 696 aa18.58■□□□□ 0.56
MAP1LC3B-208ENST00000570189 TCHHQ07283 1943 aa18.57■□□□□ 0.56
MAP1LC3B-208ENST00000570189 MYMKA6NI61 221 aa18.57■□□□□ 0.56
MAP1LC3B-208ENST00000570189 CCL16O15467 120 aa18.57■□□□□ 0.56
MAP1LC3B-208ENST00000570189 ALCAMQ13740 583 aa18.57■□□□□ 0.56
MAP1LC3B-208ENST00000570189 ZBTB41Q5SVQ8 909 aa18.57■□□□□ 0.56
MAP1LC3B-208ENST00000570189 SFR1Q86XK3 245 aa18.57■□□□□ 0.56
MAP1LC3B-208ENST00000570189 ZHX3Q9H4I2 956 aa18.57■□□□□ 0.56
MAP1LC3B-208ENST00000570189 SLC2A4RGQ9NR83 387 aa18.57■□□□□ 0.56
MAP1LC3B-208ENST00000570189 DNMT3BQ9UBC3 853 aaKnown RBP18.57■□□□□ 0.56
MAP1LC3B-208ENST00000570189 MICAL2O94851 1124 aa18.56■□□□□ 0.56
MAP1LC3B-208ENST00000570189 TYMPP19971 482 aa18.56■□□□□ 0.56
MAP1LC3B-208ENST00000570189 CEBPZQ03701 1054 aaKnown RBP18.56■□□□□ 0.56
MAP1LC3B-208ENST00000570189 POSTNQ15063 836 aa18.56■□□□□ 0.56
MAP1LC3B-208ENST00000570189 CTXN3Q4LDR2 81 aa18.56■□□□□ 0.56
MAP1LC3B-208ENST00000570189 ZC2HC1CQ53FD0 456 aaPredicted RBP18.56■□□□□ 0.56
MAP1LC3B-208ENST00000570189 CWF19L1Q69YN2 538 aaKnown RBP18.56■□□□□ 0.56
MAP1LC3B-208ENST00000570189 MTSS1LQ765P7 747 aa18.56■□□□□ 0.56
MAP1LC3B-208ENST00000570189 NT5DC4Q86YG4 428 aa18.56■□□□□ 0.56
MAP1LC3B-208ENST00000570189 FGF13Q92913 245 aa18.56■□□□□ 0.56
MAP1LC3B-208ENST00000570189 AFF4Q9UHB7 1163 aaKnown RBP18.56■□□□□ 0.56
MAP1LC3B-208ENST00000570189 A0A087X0B3 334 aa18.55■□□□□ 0.56
MAP1LC3B-208ENST00000570189 ANO9A1A5B4 782 aa18.55■□□□□ 0.56
MAP1LC3B-208ENST00000570189 ANKRD63C9JTQ0 380 aa18.55■□□□□ 0.56
MAP1LC3B-208ENST00000570189 GALR2O43603 387 aaPredicted RBP18.55■□□□□ 0.56
MAP1LC3B-208ENST00000570189 YEATS4O95619 227 aa18.55■□□□□ 0.56
MAP1LC3B-208ENST00000570189 NPR3P17342 541 aa18.55■□□□□ 0.56
MAP1LC3B-208ENST00000570189 AOC1P19801 751 aa18.55■□□□□ 0.56
MAP1LC3B-208ENST00000570189 ADSSP30520 456 aa18.55■□□□□ 0.56
MAP1LC3B-208ENST00000570189 PABPC1LQ4VXU2 614 aaKnown RBP18.55■□□□□ 0.56
MAP1LC3B-208ENST00000570189 L1TD1Q5T7N2 865 aaKnown RBP18.55■□□□□ 0.56
MAP1LC3B-208ENST00000570189 ADALQ6DHV7 355 aa18.55■□□□□ 0.56
MAP1LC3B-208ENST00000570189 DYMQ7RTS9 669 aa18.55■□□□□ 0.56
MAP1LC3B-208ENST00000570189 TMEM105Q8N8V8 129 aa18.55■□□□□ 0.56
MAP1LC3B-208ENST00000570189 RSAD2Q8WXG1 361 aa18.55■□□□□ 0.56
MAP1LC3B-208ENST00000570189 ZNF396Q96N95 335 aaPredicted RBP18.55■□□□□ 0.56
MAP1LC3B-208ENST00000570189 CUEDC2Q9H467 287 aa18.55■□□□□ 0.56
MAP1LC3B-208ENST00000570189 GDE1Q9NZC3 331 aa18.55■□□□□ 0.56
MAP1LC3B-208ENST00000570189 AGO2Q9UKV8 859 aaKnown RBP18.55■□□□□ 0.56
MAP1LC3B-208ENST00000570189 EXOC7Q9UPT5 735 aa18.55■□□□□ 0.56
MAP1LC3B-208ENST00000570189 PIRO00625 290 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 SPTLC2O15270 562 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 NARSO43776 548 aaKnown RBP18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 LRG1P02750 347 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 PTPN2P17706 415 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 ELF1P32519 619 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 STAT6P42226 847 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 LILRA4P59901 499 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 NTHL1P78549 312 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 YWHAHQ04917 246 aaPredicted RBP18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 SPAG1Q07617 926 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 TMEM132DQ14C87 1099 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 E2F4Q16254 413 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 JADE1Q6IE81 842 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 CNNM4Q6P4Q7 775 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 NPAS3Q8IXF0 933 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 RTP3Q9BQQ7 232 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 TNMDQ9H2S6 317 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 MFSD1Q9H3U5 465 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 MRPL44Q9H9J2 332 aaKnown RBP18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 HCFC1R1Q9NWW0 138 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 PCDHB13Q9Y5F0 798 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 INSL5Q9Y5Q6 135 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 NUMBLQ9Y6R0 609 aa18.54■□□□□ 0.56
MAP1LC3B-208ENST00000570189 OR6C75A6NL08 312 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms