RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 TBC1D16Q8TBP0 767 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 POF1BQ8WVV4 589 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 EDC3Q96F86 508 aaKnown RBP8.12□□□□□ -1.11
CNOT1-222ENST00000570139 SGCZQ96LD1 299 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 JMJD8Q96S16 334 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 COA1Q9GZY4 146 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 VPS33BQ9H267 617 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 SEMA4AQ9H3S1 761 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 IFT122Q9HBG6 1241 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 MYOTQ9UBF9 498 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 ZNF69Q9UC07 566 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 L1RE1Q9UN81 338 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 PCDHGB6Q9Y5F9 930 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 NUMBLQ9Y6R0 609 aa8.12□□□□□ -1.11
CNOT1-222ENST00000570139 COL1A1P02452 1464 aaPredicted RBP8.12□□□□□ -1.11
CNOT1-222ENST00000570139 BRCA1P38398 1863 aaKnown RBP8.11□□□□□ -1.11
CNOT1-222ENST00000570139 CAPN8A6NHC0 703 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 FAM90A27PA6NNH2 459 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 RASA4BC9J798 803 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 SLC27A2O14975 620 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 RASA4O43374 803 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 PPP1R11O60927 126 aaPredicted RBP8.11□□□□□ -1.11
CNOT1-222ENST00000570139 ECE1P42892 770 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 KIR2DL1P43626 348 aaPredicted RBP8.11□□□□□ -1.11
CNOT1-222ENST00000570139 KIR2DL2P43627 348 aaPredicted RBP8.11□□□□□ -1.11
CNOT1-222ENST00000570139 TUSC3Q13454 348 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 NECTIN1Q15223 517 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 HSF5Q4G112 596 aaPredicted RBP8.11□□□□□ -1.11
CNOT1-222ENST00000570139 RNF220Q5VTB9 566 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 DPP9Q86TI2 863 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 DCP2Q8IU60 420 aaKnown RBP8.11□□□□□ -1.11
CNOT1-222ENST00000570139 TDRD7Q8NHU6 1098 aaKnown RBP8.11□□□□□ -1.11
CNOT1-222ENST00000570139 ZNF622Q969S3 477 aaKnown RBP eCLIP8.11□□□□□ -1.11
CNOT1-222ENST00000570139 HHIPL1Q96JK4 782 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 TUBGCP5Q96RT8 1024 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 OSBPL1AQ9BXW6 950 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 KRTAP9-2Q9BYQ4 174 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 PDGFDQ9GZP0 370 aaPredicted RBP8.11□□□□□ -1.11
CNOT1-222ENST00000570139 KCTD10Q9H3F6 313 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 RSAD1Q9HA92 442 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 ATP13A1Q9HD20 1204 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 PIH1D3Q9NQM4 214 aaKnown RBP8.11□□□□□ -1.11
CNOT1-222ENST00000570139 KMT5AQ9NQR1 393 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 RTEL1Q9NZ71 1219 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 ASB1Q9Y576 335 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 RBM8AQ9Y5S9 174 aaKnown RBP8.11□□□□□ -1.11
CNOT1-222ENST00000570139 U3KQE9 123 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 TIAM2Q8IVF5 1701 aa8.11□□□□□ -1.11
CNOT1-222ENST00000570139 MYO5AQ9Y4I1 1855 aaKnown RBP8.11□□□□□ -1.11
CNOT1-222ENST00000570139 PSME4Q14997 1843 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 FAM205AQ6ZU69 1335 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 ZNF532Q9HCE3 1301 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 PRSS38A1L453 326 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 GPAA1O43292 621 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 PIP5K1CO60331 668 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 TADA3O75528 432 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 F13BP05160 661 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 LPLP06858 475 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 HSPD1P10809 573 aaKnown RBP8.1□□□□□ -1.11
CNOT1-222ENST00000570139 HTR1BP28222 390 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 CCT5P48643 541 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 ALDH6A1Q02252 535 aaKnown RBP8.1□□□□□ -1.11
CNOT1-222ENST00000570139 BIRC3Q13489 604 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 ANKRD1Q15327 319 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 IMMTQ16891 758 aaKnown RBP8.1□□□□□ -1.11
CNOT1-222ENST00000570139 ZBTB41Q5SVQ8 909 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 RNF43Q68DV7 783 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 NPNTQ6UXI9 565 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 DAAM2Q86T65 1068 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 SAPCD2Q86UD0 394 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 ZNF589Q86UQ0 364 aaPredicted RBP8.1□□□□□ -1.11
CNOT1-222ENST00000570139 RTKN2Q8IZC4 609 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 TTLL6Q8N841 843 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 TEX19Q8NA77 164 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 NETO1Q8TDF5 533 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 ASB11Q8WXH4 323 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 GBP4Q96PP9 640 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 NOL10Q9BSC4 688 aaKnown RBP8.1□□□□□ -1.11
CNOT1-222ENST00000570139 MYL10Q9BUA6 226 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 ACE2Q9BYF1 805 aaPredicted RBP8.1□□□□□ -1.11
CNOT1-222ENST00000570139 NACAP1Q9BZK3 213 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 AP5M1Q9H0R1 490 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 IL25Q9H293 177 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 BHMT2Q9H2M3 363 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 CD209Q9NNX6 404 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 ASH2LQ9UBL3 628 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 DPP7Q9UHL4 492 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 PLAGL2Q9UPG8 496 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 LRCH1Q9Y2L9 728 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 SNED1Q8TER0 1413 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 SLX4Q8IY92 1834 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 LAMB1P07942 1786 aa8.1□□□□□ -1.11
CNOT1-222ENST00000570139 CNTNAP5Q8WYK1 1306 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 A0A1W2PQJ5 194 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 SNAP23O00161 211 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 PRPF6O94906 941 aaKnown RBP8.09□□□□□ -1.11
CNOT1-222ENST00000570139 APOL3O95236 402 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 LDHCP07864 332 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 FXR1P51114 621 aaKnown RBP eCLIP8.09□□□□□ -1.112e-7■■□□□ 13.8
CNOT1-222ENST00000570139 AGFG1P52594 562 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms