RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 SHISA7A6NL88 538 aa15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 LACTBL1A8MY62 500 aa15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 SYN3O14994 580 aa15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 CLDN3O15551 220 aa15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 TRAPPC3O43617 180 aa15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 XYLBO75191 536 aa15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 RHOP08100 348 aa15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 NMT1P30419 496 aaKnown RBP15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 LRPAP1P30533 357 aa15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 ARPP19P56211 112 aa15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 UVSSAQ2YD98 709 aa15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 PABPC1LQ4VXU2 614 aaKnown RBP15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 PRSS36Q5K4E3 855 aa15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 SPECC1Q5M775 1068 aa15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 KCTD17Q8N5Z5 321 aa15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 DDX12PQ92771 950 aa15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 EPSTI1Q96J88 318 aa15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 CDK5RAP3Q96JB5 506 aa15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 CRISPLD1Q9H336 500 aa15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 DAXXQ9UER7 740 aaPredicted RBP15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 ODF2LQ9ULJ1 636 aa15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 TBX20Q9UMR3 447 aa15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 NCANO14594 1321 aa15.1■□□□□ 0.01
GTF3C1-211ENST00000569653 TCHHQ07283 1943 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 TICRRQ7Z2Z1 1910 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 OTOGLQ3ZCN5 2332 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 GPR179Q6PRD1 2367 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 PRR23AA6NEV1 266 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 ANKRD63C9JTQ0 380 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 K7ENM7 598 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 MOSPD3O75425 235 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 ADRB2P07550 413 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 DCNP07585 359 aaKnown RBP15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 CLTAP09496 248 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 OR4Q2P0C623 313 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 ATF2P15336 505 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 FCARP24071 287 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 MCM4P33991 863 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 UBA7P41226 1012 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 AARSP49588 968 aaKnown RBP eCLIP15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 SMTNP53814 917 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 RESTQ13127 1097 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 ANGPT1Q15389 498 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 ZC2HC1CQ53FD0 456 aaPredicted RBP15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 TCEAL8Q8IYN2 117 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 HS6ST3Q8IZP7 471 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 MCRS1Q96EZ8 462 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 FBXO2Q9UK22 296 aaPredicted RBP15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 KCNH3Q9ULD8 1083 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 PCDHB8Q9UN66 801 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 NUB1Q9Y5A7 615 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 TIMM13Q9Y5L4 95 aaPredicted RBP15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 INSL5Q9Y5Q6 135 aa15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 ZFP37Q9Y6Q3 630 aaPredicted RBP15.09■□□□□ 0.01
GTF3C1-211ENST00000569653 A0A0B4J269 797 aa15.08■□□□□ 0
GTF3C1-211ENST00000569653 VPS37CA5D8V6 355 aaPredicted RBP15.08■□□□□ 0
GTF3C1-211ENST00000569653 M0QZQ0 153 aa15.08■□□□□ 0
GTF3C1-211ENST00000569653 SPTLC1O15269 473 aa15.08■□□□□ 0
GTF3C1-211ENST00000569653 SLC26A4O43511 780 aa15.08■□□□□ 0
GTF3C1-211ENST00000569653 NFICP08651 508 aa15.08■□□□□ 0
GTF3C1-211ENST00000569653 LONP1P36776 959 aaKnown RBP15.08■□□□□ 0
GTF3C1-211ENST00000569653 CTXN3Q4LDR2 81 aa15.08■□□□□ 0
GTF3C1-211ENST00000569653 PHLDB3Q6NSJ2 640 aa15.08■□□□□ 0
GTF3C1-211ENST00000569653 RNF19BQ6ZMZ0 732 aa15.08■□□□□ 0
GTF3C1-211ENST00000569653 BRAPQ7Z569 592 aa15.08■□□□□ 0
GTF3C1-211ENST00000569653 MYCT1Q8N699 235 aa15.08■□□□□ 0
GTF3C1-211ENST00000569653 BEST2Q8NFU1 509 aa15.08■□□□□ 0
GTF3C1-211ENST00000569653 KIF12Q96FN5 646 aa15.08■□□□□ 0
GTF3C1-211ENST00000569653 BICD1Q96G01 975 aa15.08■□□□□ 0
GTF3C1-211ENST00000569653 CLIC6Q96NY7 704 aa15.08■□□□□ 0
GTF3C1-211ENST00000569653 RTP3Q9BQQ7 232 aa15.08■□□□□ 0
GTF3C1-211ENST00000569653 CCSER1Q9C0I3 900 aa15.08■□□□□ 0
GTF3C1-211ENST00000569653 CEP72Q9P209 647 aa15.08■□□□□ 0
GTF3C1-211ENST00000569653 LARSQ9P2J5 1176 aaKnown RBP15.08■□□□□ 0
GTF3C1-211ENST00000569653 MRPS23Q9Y3D9 190 aaKnown RBP15.08■□□□□ 0
GTF3C1-211ENST00000569653 MTF2Q9Y483 593 aaPredicted RBP15.08■□□□□ 0
GTF3C1-211ENST00000569653 A0A087X0B3 334 aa15.07■□□□□ 0
GTF3C1-211ENST00000569653 PRRG1O14668 218 aa15.07■□□□□ 0
GTF3C1-211ENST00000569653 HNRNPDLO14979 420 aaKnown RBP15.07■□□□□ 0
GTF3C1-211ENST00000569653 TRAK2O60296 914 aa15.07■□□□□ 0
GTF3C1-211ENST00000569653 FAM13AO94988 1023 aa15.07■□□□□ 0
GTF3C1-211ENST00000569653 MARCKSP29966 332 aaPredicted RBP15.07■□□□□ 0
GTF3C1-211ENST00000569653 LIG4P49917 911 aa15.07■□□□□ 0
GTF3C1-211ENST00000569653 WNT7BP56706 349 aa15.07■□□□□ 0
GTF3C1-211ENST00000569653 STARD6P59095 220 aa15.07■□□□□ 0
GTF3C1-211ENST00000569653 GTF2BQ00403 316 aa15.07■□□□□ 0
GTF3C1-211ENST00000569653 SNW1Q13573 536 aaKnown RBP15.07■□□□□ 0
GTF3C1-211ENST00000569653 SCARA3Q6AZY7 606 aa15.07■□□□□ 0
GTF3C1-211ENST00000569653 TANGO2Q6ICL3 276 aa15.07■□□□□ 0
GTF3C1-211ENST00000569653 TTC9BQ8N6N2 239 aa15.07■□□□□ 0
GTF3C1-211ENST00000569653 ZSWIM2Q8NEG5 633 aa15.07■□□□□ 0
GTF3C1-211ENST00000569653 CALML4Q96GE6 196 aa15.07■□□□□ 0
GTF3C1-211ENST00000569653 ZSWIM3Q96MP5 696 aa15.07■□□□□ 0
GTF3C1-211ENST00000569653 TMEM209Q96SK2 561 aa15.07■□□□□ 0
GTF3C1-211ENST00000569653 CORO1BQ9BR76 489 aa15.07■□□□□ 0
GTF3C1-211ENST00000569653 DDX23Q9BUQ8 820 aaKnown RBP15.07■□□□□ 0
GTF3C1-211ENST00000569653 IRF2BPLQ9H1B7 796 aa15.07■□□□□ 0
GTF3C1-211ENST00000569653 PLEKHA5Q9HAU0 1116 aa15.07■□□□□ 0
GTF3C1-211ENST00000569653 PARVGQ9HBI0 331 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms