RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 SPOUT1Q5T280 376 aaKnown RBP25.27■■□□□ 1.64
RAB40C-212ENST00000569575 KCNT2Q6UVM3 1135 aa25.27■■□□□ 1.64
RAB40C-212ENST00000569575 APTXQ7Z2E3 356 aaKnown RBP25.27■■□□□ 1.64
RAB40C-212ENST00000569575 TMCO2Q7Z6W1 182 aaPredicted RBP25.27■■□□□ 1.64
RAB40C-212ENST00000569575 CXorf38Q8TB03 319 aa25.27■■□□□ 1.64
RAB40C-212ENST00000569575 RAB20Q9NX57 234 aa25.27■■□□□ 1.64
RAB40C-212ENST00000569575 MRPL42Q9Y6G3 142 aaKnown RBP25.27■■□□□ 1.64
RAB40C-212ENST00000569575 TULP1O00294 542 aaPredicted RBP25.26■■□□□ 1.63
RAB40C-212ENST00000569575 P4HA1P13674 534 aa25.26■■□□□ 1.63
RAB40C-212ENST00000569575 TAF6P49848 677 aa25.26■■□□□ 1.63
RAB40C-212ENST00000569575 FANCCQ00597 558 aa25.26■■□□□ 1.63
RAB40C-212ENST00000569575 WDR44Q5JSH3 913 aa25.26■■□□□ 1.63
RAB40C-212ENST00000569575 SARM1Q6SZW1 724 aa25.26■■□□□ 1.63
RAB40C-212ENST00000569575 GBP6Q6ZN66 633 aa25.26■■□□□ 1.63
RAB40C-212ENST00000569575 AGAP1Q9UPQ3 857 aa25.26■■□□□ 1.63
RAB40C-212ENST00000569575 A0A1B0GTH6 734 aa25.25■■□□□ 1.63
RAB40C-212ENST00000569575 C5orf67F2Z3F1 127 aa25.25■■□□□ 1.63
RAB40C-212ENST00000569575 NRP1O14786 923 aa25.25■■□□□ 1.63
RAB40C-212ENST00000569575 B3GAT3O94766 335 aa25.25■■□□□ 1.63
RAB40C-212ENST00000569575 KRT19P08727 400 aa25.25■■□□□ 1.63
RAB40C-212ENST00000569575 POLR2BP30876 1174 aaKnown RBP25.25■■□□□ 1.63
RAB40C-212ENST00000569575 PIK3CAP42336 1068 aa25.25■■□□□ 1.63
RAB40C-212ENST00000569575 OR1G1P47890 313 aa25.25■■□□□ 1.63
RAB40C-212ENST00000569575 CLCNKBP51801 687 aa25.25■■□□□ 1.63
RAB40C-212ENST00000569575 CBWD6Q4V339 395 aa25.25■■□□□ 1.63
RAB40C-212ENST00000569575 CBWD3Q5JTY5 395 aa25.25■■□□□ 1.63
RAB40C-212ENST00000569575 CBWD5Q5RIA9 395 aa25.25■■□□□ 1.63
RAB40C-212ENST00000569575 LMBRD2Q68DH5 695 aaPredicted RBP25.25■■□□□ 1.63
RAB40C-212ENST00000569575 DPH6Q7L8W6 267 aa25.25■■□□□ 1.63
RAB40C-212ENST00000569575 COLGALT1Q8NBJ5 622 aa25.25■■□□□ 1.63
RAB40C-212ENST00000569575 SPATA18Q8TC71 538 aa25.25■■□□□ 1.63
RAB40C-212ENST00000569575 VPS16Q9H269 839 aa25.25■■□□□ 1.63
RAB40C-212ENST00000569575 RTN4Q9NQC3 1192 aaKnown RBP25.25■■□□□ 1.63
RAB40C-212ENST00000569575 GDAP2Q9NXN4 497 aa25.25■■□□□ 1.63
RAB40C-212ENST00000569575 TAB2Q9NYJ8 693 aa25.25■■□□□ 1.63
RAB40C-212ENST00000569575 SPG21Q9NZD8 308 aa25.25■■□□□ 1.63
RAB40C-212ENST00000569575 SIX4Q9UIU6 781 aa25.25■■□□□ 1.63
RAB40C-212ENST00000569575 LINC01553A4QN01 128 aa25.24■■□□□ 1.63
RAB40C-212ENST00000569575 CASTOR2A6NHX0 329 aa25.24■■□□□ 1.63
RAB40C-212ENST00000569575 ASS1P00966 412 aaKnown RBP25.24■■□□□ 1.63
RAB40C-212ENST00000569575 HLA-DRAP01903 254 aa25.24■■□□□ 1.63
RAB40C-212ENST00000569575 BMPR1AP36894 532 aa25.24■■□□□ 1.63
RAB40C-212ENST00000569575 SLC11A1P49279 550 aa25.24■■□□□ 1.63
RAB40C-212ENST00000569575 AARSP49588 968 aaKnown RBP eCLIP25.24■■□□□ 1.633e-8■■■■■ 29.1
RAB40C-212ENST00000569575 UBASH3AP57075 661 aa25.24■■□□□ 1.63
RAB40C-212ENST00000569575 LILRA4P59901 499 aa25.24■■□□□ 1.63
RAB40C-212ENST00000569575 KRT17Q04695 432 aa25.24■■□□□ 1.63
RAB40C-212ENST00000569575 EXOC3L4Q17RC7 722 aa25.24■■□□□ 1.63
RAB40C-212ENST00000569575 EPC2Q52LR7 807 aa25.24■■□□□ 1.63
RAB40C-212ENST00000569575 GPR65Q8IYL9 337 aa25.24■■□□□ 1.63
RAB40C-212ENST00000569575 EHBP1Q8NDI1 1231 aa25.24■■□□□ 1.63
RAB40C-212ENST00000569575 HPDLQ96IR7 371 aa25.24■■□□□ 1.63
RAB40C-212ENST00000569575 ERGIC2Q96RQ1 377 aa25.24■■□□□ 1.63
RAB40C-212ENST00000569575 TGS1Q96RS0 853 aaKnown RBP25.24■■□□□ 1.63
RAB40C-212ENST00000569575 PBX4Q9BYU1 374 aa25.24■■□□□ 1.63
RAB40C-212ENST00000569575 DNAJB4Q9UDY4 337 aa25.24■■□□□ 1.63
RAB40C-212ENST00000569575 NUB1Q9Y5A7 615 aa25.24■■□□□ 1.63
RAB40C-212ENST00000569575 TMEM265A0A087WTH1 108 aa25.23■■□□□ 1.63
RAB40C-212ENST00000569575 A0A1W2PQC6 194 aa25.23■■□□□ 1.63
RAB40C-212ENST00000569575 PES1O00541 588 aaKnown RBP25.23■■□□□ 1.63
RAB40C-212ENST00000569575 TADA2AO75478 443 aa25.23■■□□□ 1.63
RAB40C-212ENST00000569575 VNN1O95497 513 aa25.23■■□□□ 1.63
RAB40C-212ENST00000569575 CST3P01034 146 aaPredicted RBP25.23■■□□□ 1.63
RAB40C-212ENST00000569575 PLCB3Q01970 1234 aa25.23■■□□□ 1.63
RAB40C-212ENST00000569575 UBE3AQ05086 875 aa25.23■■□□□ 1.63
RAB40C-212ENST00000569575 NR1I3Q14994 352 aa25.23■■□□□ 1.63
RAB40C-212ENST00000569575 SLC39A11Q8N1S5 342 aa25.23■■□□□ 1.63
RAB40C-212ENST00000569575 TTC39CQ8N584 583 aa25.23■■□□□ 1.63
RAB40C-212ENST00000569575 TAS1R2Q8TE23 839 aa25.23■■□□□ 1.63
RAB40C-212ENST00000569575 TMEM169Q96HH4 297 aa25.23■■□□□ 1.63
RAB40C-212ENST00000569575 IGSF21Q96ID5 467 aa25.23■■□□□ 1.63
RAB40C-212ENST00000569575 MMRN2Q9H8L6 949 aa25.23■■□□□ 1.63
RAB40C-212ENST00000569575 ADAM28Q9UKQ2 775 aa25.23■■□□□ 1.63
RAB40C-212ENST00000569575 LZTS1Q9Y250 596 aa25.23■■□□□ 1.63
RAB40C-212ENST00000569575 SF3B1O75533 1304 aaKnown RBP eCLIP25.22■■□□□ 1.631e-6■■■■■ 94.1
RAB40C-212ENST00000569575 KPNA7A9QM74 516 aa25.22■■□□□ 1.63
RAB40C-212ENST00000569575 LINC00271P0C7V0 271 aa25.22■■□□□ 1.63
RAB40C-212ENST00000569575 RFX1P22670 979 aa25.22■■□□□ 1.63
RAB40C-212ENST00000569575 RABGGTBP53611 331 aa25.22■■□□□ 1.63
RAB40C-212ENST00000569575 ERVK-21P61565 698 aa25.22■■□□□ 1.63
RAB40C-212ENST00000569575 UBXN1Q04323 297 aa25.22■■□□□ 1.63
RAB40C-212ENST00000569575 JAKMIP2Q96AA8 810 aa25.22■■□□□ 1.63
RAB40C-212ENST00000569575 IQCDQ96DY2 449 aa25.22■■□□□ 1.63
RAB40C-212ENST00000569575 XYLT2Q9H1B5 865 aa25.22■■□□□ 1.63
RAB40C-212ENST00000569575 SLC28A3Q9HAS3 691 aa25.22■■□□□ 1.63
RAB40C-212ENST00000569575 GOLGA2P5Q9HBQ8 144 aa25.22■■□□□ 1.63
RAB40C-212ENST00000569575 DSEQ9UL01 958 aa25.22■■□□□ 1.63
RAB40C-212ENST00000569575 GRXCR1A8MXD5 290 aa25.21■■□□□ 1.63
RAB40C-212ENST00000569575 RBAK-RBAKDNI3L0D1 243 aa25.21■■□□□ 1.63
RAB40C-212ENST00000569575 SYN3O14994 580 aa25.21■■□□□ 1.63
RAB40C-212ENST00000569575 CA3P07451 260 aa25.21■■□□□ 1.63
RAB40C-212ENST00000569575 ZNF699Q32M78 642 aa25.21■■□□□ 1.63
RAB40C-212ENST00000569575 ZNF667Q5HYK9 610 aa25.21■■□□□ 1.63
RAB40C-212ENST00000569575 FAM109BQ6ICB4 259 aaPredicted RBP25.21■■□□□ 1.63
RAB40C-212ENST00000569575 SUSD3Q96L08 255 aa25.21■■□□□ 1.63
RAB40C-212ENST00000569575 C11orf84Q9BUA3 381 aaPredicted RBP25.21■■□□□ 1.63
RAB40C-212ENST00000569575 OXCT2Q9BYC2 517 aaPredicted RBP25.21■■□□□ 1.63
RAB40C-212ENST00000569575 GCNT4Q9P109 453 aa25.21■■□□□ 1.63
RAB40C-212ENST00000569575 PUF60Q9UHX1 559 aaKnown RBP25.21■■□□□ 1.63
RAB40C-212ENST00000569575 TNRC18O15417 2968 aaPredicted RBP25.2■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms