RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 CHST7Q9NS84 486 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 RBAKQ9NYW8 714 aaPredicted RBP9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 UBQLN1Q9UMX0 589 aaKnown RBP9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 POLIQ9UNA4 740 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 CDY1Q9Y6F8 540 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 A0A1W2PQ27 194 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 A0A1W2PQ64 194 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 A0A1W2PQD8 194 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 TGFB1I1O43294 461 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 TGM5O43548 720 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 GALR2O43603 387 aaPredicted RBP9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 GLUD1P00367 558 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 ADH1AP07327 375 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 OR4Q2P0C623 313 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 DLATP10515 647 aaKnown RBP9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 ABCD1P33897 745 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 SMAD4Q13485 552 aaKnown RBP9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 ALCAMQ13740 583 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 RSPO2Q6UXX9 243 aaPredicted RBP9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 EPM2AIP1Q7L775 607 aaPredicted RBP9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 EFCAB13Q8IY85 973 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 SMYD4Q8IYR2 804 aaPredicted RBP9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 RNF168Q8IYW5 571 aaPredicted RBP9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 KIAA0895Q8NCT3 520 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 BEST2Q8NFU1 509 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 LNX1Q8TBB1 728 aaPredicted RBP9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 ZNF507Q8TCN5 953 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 ELMO3Q96BJ8 720 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 CCDC127Q96BQ5 260 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 FBXL18Q96ME1 805 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 PLEKHA5Q9HAU0 1116 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 PIDD1Q9HB75 910 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 DPP3Q9NY33 737 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 HSPBP1Q9NZL4 362 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 SSX2IPQ9Y2D8 614 aa9.78□□□□□ -0.84
GTF3C1-210ENST00000569394 TTC28Q96AY4 2481 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 CCDC195A0A1B0GUA6 201 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 PVALEFA0A1B0GWK0 134 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 CARNS1A5YM72 827 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 CCL16O15467 120 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 XPOTO43592 962 aaKnown RBP9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 TRAPPC3O43617 180 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 EXTL3O43909 919 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 EFEMP2O95967 443 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 ITGB3P05106 788 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 ADRB2P07550 413 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 SCP2P22307 547 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 FGFR3P22607 806 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 POLR2BP30876 1174 aaKnown RBP9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 RPL9P32969 192 aaKnown RBP9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 CASP4P49662 377 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 DPYDQ12882 1025 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 ELAVL2Q12926 359 aaKnown RBP9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 KCNC3Q14003 757 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 COL19A1Q14993 1142 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 KYAT1Q16773 422 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 CTXN3Q4LDR2 81 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 VARS2Q5ST30 1063 aaKnown RBP9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 C9orf57Q5W0N0 161 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 SMYD5Q6GMV2 418 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 CES5AQ6NT32 575 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 PPFIBP1Q86W92 1011 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 SMRP1Q8NCR6 262 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 KREMEN2Q8NCW0 462 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 KHSRPQ92945 711 aaKnown RBP eCLIP9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 CCDC47Q96A33 483 aaKnown RBP9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 EEF2KMTQ96G04 330 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 PGLYRP2Q96PD5 576 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 CLSTN3Q9BQT9 956 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 S1PR5Q9H228 398 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 POMKQ9H5K3 350 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.77□□□□□ -0.853e-10■■■■■ 130.4
GTF3C1-210ENST00000569394 AGPAT3Q9NRZ7 376 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 CHMP5Q9NZZ3 219 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 USP25Q9UHP3 1055 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 AGAP1Q9UPQ3 857 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 FAM50BQ9Y247 325 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 IRAK3Q9Y616 596 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 STYXL1Q9Y6J8 313 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 VCANP13611 3396 aa9.77□□□□□ -0.85
GTF3C1-210ENST00000569394 ZNF233A6NK53 670 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 SPTLC1O15269 473 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 EIF3DO15371 548 aaKnown RBP eCLIP9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 EXOC3O60645 756 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 PRPF40AO75400 957 aaKnown RBP9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 LDHAP00338 332 aaKnown RBP9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 TMEM191BP0C7N4 346 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 CPB1P15086 417 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 TNNI1P19237 187 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 GARTP22102 1010 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 EHHADHQ08426 723 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 BFSP1Q12934 665 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 SNW1Q13573 536 aaKnown RBP9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 CBX2Q14781 532 aaPredicted RBP9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 SMAD2Q15796 467 aaKnown RBP9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 ZBTB6Q15916 424 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 KNOP1Q1ED39 458 aaKnown RBP9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 PUS10Q3MIT2 529 aaKnown RBP9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 SPATA1Q5VX52 437 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms