RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 SNX27Q96L92 541 aa10.2□□□□□ -0.78
UBR1-210ENST00000569337 FBXL18Q96ME1 805 aa10.2□□□□□ -0.78
UBR1-210ENST00000569337 UROC1Q96N76 676 aa10.2□□□□□ -0.78
UBR1-210ENST00000569337 DUSP9Q99956 384 aaKnown RBP10.2□□□□□ -0.78
UBR1-210ENST00000569337 CBWD1Q9BRT8 395 aa10.2□□□□□ -0.78
UBR1-210ENST00000569337 TTPALQ9BTX7 342 aa10.2□□□□□ -0.78
UBR1-210ENST00000569337 C1QTNF1Q9BXJ1 281 aa10.2□□□□□ -0.78
UBR1-210ENST00000569337 ADAM7Q9H2U9 754 aa10.2□□□□□ -0.78
UBR1-210ENST00000569337 TMEM206Q9H813 350 aa10.2□□□□□ -0.78
UBR1-210ENST00000569337 RXFP1Q9HBX9 757 aa10.2□□□□□ -0.78
UBR1-210ENST00000569337 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.2□□□□□ -0.78
UBR1-210ENST00000569337 DPP7Q9UHL4 492 aa10.2□□□□□ -0.78
UBR1-210ENST00000569337 STYXL1Q9Y6J8 313 aa10.2□□□□□ -0.78
UBR1-210ENST00000569337 PI4K2BG5E9Z4 385 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 PDXKO00764 312 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 TRAPPC3O43617 180 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 GLUD1P00367 558 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 CLTAP09496 248 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 ALADP13716 330 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 KCNE1P15382 129 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 MTHFRP42898 656 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 CLCNKBP51801 687 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 CREMQ03060 361 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 SLC10A6Q3KNW5 377 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 ATAT1Q5SQI0 421 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 ZBTB41Q5SVQ8 909 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 ELMSAN1Q6PJG2 1045 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 STXBP4Q6ZWJ1 553 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 PALB2Q86YC2 1186 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 SYCP3Q8IZU3 236 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 KHSRPQ92945 711 aaKnown RBP eCLIP10.19□□□□□ -0.78
UBR1-210ENST00000569337 EEF2KMTQ96G04 330 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 DDX27Q96GQ7 796 aaKnown RBP10.19□□□□□ -0.78
UBR1-210ENST00000569337 RIPOR3Q96MK2 946 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 ZMAT2Q96NC0 199 aaKnown RBP10.19□□□□□ -0.78
UBR1-210ENST00000569337 NECTIN4Q96NY8 510 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 GTPBP4Q9BZE4 634 aaKnown RBP10.19□□□□□ -0.78
UBR1-210ENST00000569337 EPHX3Q9H6B9 360 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 GOLGA2P5Q9HBQ8 144 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 AGPAT3Q9NRZ7 376 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 CNTN3Q9P232 1028 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 FNIP2Q9P278 1114 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 TRAF3IP3Q9Y228 551 aa10.19□□□□□ -0.78
UBR1-210ENST00000569337 PDCD11Q14690 1871 aaKnown RBP10.19□□□□□ -0.78
UBR1-210ENST00000569337 MUC3AQ02505 3323 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 TCF20Q9UGU0 1960 aaKnown RBP10.18□□□□□ -0.78
UBR1-210ENST00000569337 A0A0B4J269 797 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 LOC730098B7Z3J9 87 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 TMEM189-UBE2V1I3L0A0 370 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 PSMA7O14818 248 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 OGTO15294 1046 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 MEFVO15553 781 aaPredicted RBP10.18□□□□□ -0.78
UBR1-210ENST00000569337 FAM189A1O60320 539 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 RPL17P18621 184 aaKnown RBP10.18□□□□□ -0.78
UBR1-210ENST00000569337 ERCC5P28715 1186 aaPredicted RBP10.18□□□□□ -0.78
UBR1-210ENST00000569337 RPL9P32969 192 aaKnown RBP10.18□□□□□ -0.78
UBR1-210ENST00000569337 STIM1Q13586 685 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 NCAPHQ15003 741 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 IQCB1Q15051 598 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 UPP1Q16831 310 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 RTP2Q5QGT7 225 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 PDXDC1Q6P996 788 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 PRSS55Q6UWB4 352 aaPredicted RBP10.18□□□□□ -0.78
UBR1-210ENST00000569337 TMC5Q6UXY8 1006 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 GLYCTKQ8IVS8 523 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 DHX40Q8IX18 779 aaKnown RBP10.18□□□□□ -0.78
UBR1-210ENST00000569337 ZC3H3Q8IXZ2 948 aaKnown RBP10.18□□□□□ -0.78
UBR1-210ENST00000569337 PIK3R5Q8WYR1 880 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 MSTO1Q9BUK6 570 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 HSD3B7Q9H2F3 369 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 TSPY26PQ9H489 355 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 PCIF1Q9H4Z3 704 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 SFXN1Q9H9B4 322 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 RPF1Q9H9Y2 349 aaKnown RBP10.18□□□□□ -0.78
UBR1-210ENST00000569337 PLEKHA5Q9HAU0 1116 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 MAN1C1Q9NR34 630 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 DMAC2Q9NW81 257 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 RWDD2AQ9UIY3 292 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 EXOC7Q9UPT5 735 aa10.18□□□□□ -0.78
UBR1-210ENST00000569337 GOLGA8IPA6NC78 632 aa10.17□□□□□ -0.78
UBR1-210ENST00000569337 GOLGA8JA6NMD2 632 aa10.17□□□□□ -0.78
UBR1-210ENST00000569337 PODXLO00592 558 aa10.17□□□□□ -0.78
UBR1-210ENST00000569337 DCXO43602 365 aa10.17□□□□□ -0.78
UBR1-210ENST00000569337 KIF20AO95235 890 aa10.17□□□□□ -0.78
UBR1-210ENST00000569337 C1RP00736 705 aa10.17□□□□□ -0.78
UBR1-210ENST00000569337 NR3C1P04150 777 aa10.17□□□□□ -0.78
UBR1-210ENST00000569337 WEE2P0C1S8 567 aa10.17□□□□□ -0.78
UBR1-210ENST00000569337 SPATA31D3P0C874 917 aa10.17□□□□□ -0.78
UBR1-210ENST00000569337 CXCL8P10145 99 aa10.17□□□□□ -0.78
UBR1-210ENST00000569337 PPP1R2P41236 205 aa10.17□□□□□ -0.78
UBR1-210ENST00000569337 TNFSF9P41273 254 aa10.17□□□□□ -0.78
UBR1-210ENST00000569337 CASP4P49662 377 aa10.17□□□□□ -0.78
UBR1-210ENST00000569337 ZNF165P49910 485 aa10.17□□□□□ -0.78
UBR1-210ENST00000569337 CYP2J2P51589 502 aa10.17□□□□□ -0.78
UBR1-210ENST00000569337 LRRC63Q05C16 580 aa10.17□□□□□ -0.78
UBR1-210ENST00000569337 PPP2R3AQ06190 1150 aa10.17□□□□□ -0.78
UBR1-210ENST00000569337 SOX4Q06945 474 aaPredicted RBP10.17□□□□□ -0.78
UBR1-210ENST00000569337 PSMD5Q16401 504 aa10.17□□□□□ -0.78
UBR1-210ENST00000569337 NFIL3Q16649 462 aa10.17□□□□□ -0.78
UBR1-210ENST00000569337 EDRF1Q3B7T1 1238 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms