RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 SPATA1Q5VX52 437 aa13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 DCLRE1AQ6PJP8 1040 aa13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 EP400NLQ6ZTU2 488 aa13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 HS2ST1Q7LGA3 356 aa13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 RNF168Q8IYW5 571 aaPredicted RBP13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 NOC3LQ8WTT2 800 aaKnown RBP13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 PABPC5Q96DU9 382 aaKnown RBP13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 CDCA3Q99618 268 aaPredicted RBP13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 HERC2P3Q9BVR0 1158 aa13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 GPR62Q9BZJ7 368 aa13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 ASB7Q9H672 318 aa13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 CLDND1Q9NY35 253 aa13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 UBQLN1Q9UMX0 589 aaKnown RBP13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 SSX2IPQ9Y2D8 614 aa13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 IRAK3Q9Y616 596 aa13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 ANK1P16157 1881 aa13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 BRWD1Q9NSI6 2320 aa13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 TMEM189-UBE2V1I3L0A0 370 aa13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 PODXLO00592 558 aa13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 TGFB1I1O43294 461 aa13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 EXTL3O43909 919 aa13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 EFEMP2O95967 443 aa13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 URODP06132 367 aa13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 RPL9P32969 192 aaKnown RBP13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 GTF2F1P35269 517 aaKnown RBP eCLIP13.58□□□□□ -0.245e-6■■■■□ 22
NSMCE1-214ENST00000569236 GLUD2P49448 558 aa13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 PTPN14Q15678 1187 aa13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 USP41Q3LFD5 358 aa13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 KIAA1841Q6NSI8 718 aa13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 CRELD2Q6UXH1 353 aaPredicted RBP13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 GPD1LQ8N335 351 aa13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 CCDC150Q8NCX0 1101 aa13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 AUTS2Q8WXX7 1259 aa13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 MRPL17Q9NRX2 175 aaKnown RBP13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 AGPAT3Q9NRZ7 376 aa13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 CGNQ9P2M7 1197 aaKnown RBP13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 TUBGCP4Q9UGJ1 667 aa13.58□□□□□ -0.24
NSMCE1-214ENST00000569236 GOLGA8IPA6NC78 632 aa13.57□□□□□ -0.24
NSMCE1-214ENST00000569236 GOLGA8JA6NMD2 632 aa13.57□□□□□ -0.24
NSMCE1-214ENST00000569236 C2CD2LO14523 706 aa13.57□□□□□ -0.24
NSMCE1-214ENST00000569236 KIF20AO95235 890 aa13.57□□□□□ -0.24
NSMCE1-214ENST00000569236 IL18RAPO95256 599 aa13.57□□□□□ -0.24
NSMCE1-214ENST00000569236 CYP3A5P20815 502 aa13.57□□□□□ -0.24
NSMCE1-214ENST00000569236 ELAVL2Q12926 359 aaKnown RBP13.57□□□□□ -0.24
NSMCE1-214ENST00000569236 COL19A1Q14993 1142 aa13.57□□□□□ -0.24
NSMCE1-214ENST00000569236 TMEM132DQ14C87 1099 aa13.57□□□□□ -0.24
NSMCE1-214ENST00000569236 DUSP6Q16828 381 aa13.57□□□□□ -0.24
NSMCE1-214ENST00000569236 JADE1Q6IE81 842 aa13.57□□□□□ -0.24
NSMCE1-214ENST00000569236 TAS1R1Q7RTX1 841 aa13.57□□□□□ -0.24
NSMCE1-214ENST00000569236 SMYD4Q8IYR2 804 aaPredicted RBP13.57□□□□□ -0.24
NSMCE1-214ENST00000569236 EFHBQ8N7U6 833 aa13.57□□□□□ -0.24
NSMCE1-214ENST00000569236 ZSWIM2Q8NEG5 633 aa13.57□□□□□ -0.24
NSMCE1-214ENST00000569236 GOLGA5Q8TBA6 731 aa13.57□□□□□ -0.24
NSMCE1-214ENST00000569236 UBE2ZQ9H832 354 aaPredicted RBP13.57□□□□□ -0.24
NSMCE1-214ENST00000569236 RBAKQ9NYW8 714 aaPredicted RBP13.57□□□□□ -0.24
NSMCE1-214ENST00000569236 HSPBP1Q9NZL4 362 aa13.57□□□□□ -0.24
NSMCE1-214ENST00000569236 DERAQ9Y315 318 aa13.57□□□□□ -0.24
NSMCE1-214ENST00000569236 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 TRAPPC3O43617 180 aa13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 NFICP08651 508 aa13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 KCNA5P22460 613 aa13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 ZBTB6Q15916 424 aa13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 CTC1Q2NKJ3 1217 aa13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 FAM171A1Q5VUB5 890 aa13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 CDKAL1Q5VV42 579 aa13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 TMC6Q7Z403 805 aa13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 VSTM4Q8IW00 320 aa13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 BRSK2Q8IWQ3 736 aa13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 C3orf58Q8NDZ4 430 aa13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 BEST2Q8NFU1 509 aa13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 ATXN2LQ8WWM7 1075 aaKnown RBP13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 B3GALT6Q96L58 329 aa13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 EMILIN2Q9BXX0 1053 aa13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 KIAA1586Q9HCI6 787 aa13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 CHST7Q9NS84 486 aa13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 INTS13Q9NVM9 706 aa13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 RWDD2AQ9UIY3 292 aa13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 C2CD2Q9Y426 696 aa13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 NUB1Q9Y5A7 615 aa13.56□□□□□ -0.24
NSMCE1-214ENST00000569236 CLIC2O15247 247 aa13.55□□□□□ -0.24
NSMCE1-214ENST00000569236 LINC01565O15544 149 aa13.55□□□□□ -0.24
NSMCE1-214ENST00000569236 SRGAP2BP0DMP2 458 aa13.55□□□□□ -0.24
NSMCE1-214ENST00000569236 LRPAP1P30533 357 aa13.55□□□□□ -0.24
NSMCE1-214ENST00000569236 NDUFV1P49821 464 aa13.55□□□□□ -0.24
NSMCE1-214ENST00000569236 CCZ1BP86790 482 aa13.55□□□□□ -0.24
NSMCE1-214ENST00000569236 CCZ1P86791 482 aaPredicted RBP13.55□□□□□ -0.24
NSMCE1-214ENST00000569236 DSG1Q02413 1049 aa13.55□□□□□ -0.24
NSMCE1-214ENST00000569236 TFF2Q03403 129 aa13.55□□□□□ -0.24
NSMCE1-214ENST00000569236 PAK1Q13153 545 aa13.55□□□□□ -0.24
NSMCE1-214ENST00000569236 ADAM15Q13444 863 aa13.55□□□□□ -0.24
NSMCE1-214ENST00000569236 ARID5BQ14865 1188 aa13.55□□□□□ -0.24
NSMCE1-214ENST00000569236 AAK1Q2M2I8 961 aa13.55□□□□□ -0.24
NSMCE1-214ENST00000569236 KIAA0319Q5VV43 1072 aa13.55□□□□□ -0.24
NSMCE1-214ENST00000569236 KLHL10Q6JEL2 608 aa13.55□□□□□ -0.24
NSMCE1-214ENST00000569236 CEP57Q86XR8 500 aa13.55□□□□□ -0.24
NSMCE1-214ENST00000569236 NT5DC4Q86YG4 428 aa13.55□□□□□ -0.24
NSMCE1-214ENST00000569236 C17orf53Q8N3J3 647 aaPredicted RBP13.55□□□□□ -0.24
NSMCE1-214ENST00000569236 NAP1L5Q96NT1 182 aaPredicted RBP13.55□□□□□ -0.24
NSMCE1-214ENST00000569236 GTPBP4Q9BZE4 634 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms