RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 STAT6P42226 847 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 PPP2R3AQ06190 1150 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 HTR4Q13639 388 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 STK38Q15208 465 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 KYAT1Q16773 422 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 IER5LQ5T953 404 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 SPATA1Q5VX52 437 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 CWF19L1Q69YN2 538 aaKnown RBP8.51□□□□□ -1.05
CDH3-209ENST00000569080 JADE1Q6IE81 842 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 POTEHQ6S545 545 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 CCDC73Q6ZRK6 1079 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 SV2BQ7L1I2 683 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 GET4Q7L5D6 327 aaPredicted RBP8.51□□□□□ -1.05
CDH3-209ENST00000569080 GRASPQ7Z6J2 395 aaPredicted RBP8.51□□□□□ -1.05
CDH3-209ENST00000569080 EFCAB13Q8IY85 973 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 PRSS33Q8NF86 280 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 BEST2Q8NFU1 509 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 STAMQ92783 540 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 PBXIP1Q96AQ6 731 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 ACSF2Q96CM8 615 aaPredicted RBP8.51□□□□□ -1.05
CDH3-209ENST00000569080 KIF12Q96FN5 646 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 MFSD14AQ96MC6 490 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 MSTO1Q9BUK6 570 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 KCNH6Q9H252 994 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 KBTBD4Q9NVX7 518 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 HCFC1R1Q9NWW0 138 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 FBXL5Q9UKA1 691 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 UBQLN1Q9UMX0 589 aaKnown RBP8.51□□□□□ -1.05
CDH3-209ENST00000569080 PCDHB8Q9UN66 801 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.51□□□□□ -1.05
CDH3-209ENST00000569080 COL4A2P08572 1712 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 ANO9A1A5B4 782 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 SPTLC1O15269 473 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 CCL16O15467 120 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 NARSO43776 548 aaKnown RBP8.5□□□□□ -1.05
CDH3-209ENST00000569080 SEC24AO95486 1093 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 LAMP2P13473 410 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 ATF2P15336 505 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 MCM4P33991 863 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 MATR3P43243 847 aaKnown RBP eCLIP8.5□□□□□ -1.05
CDH3-209ENST00000569080 ACOT2P49753 483 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 POU5F1Q01860 360 aaKnown RBP8.5□□□□□ -1.05
CDH3-209ENST00000569080 EHHADHQ08426 723 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 TDGQ13569 410 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 SLC5A9Q2M3M2 681 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 PPM1LQ5SGD2 360 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 L1TD1Q5T7N2 865 aaKnown RBP8.5□□□□□ -1.05
CDH3-209ENST00000569080 FOXD4L5Q5VV16 416 aaPredicted RBP8.5□□□□□ -1.05
CDH3-209ENST00000569080 ZNF280DQ6N043 979 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 CNNM4Q6P4Q7 775 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 RTL10Q7L3V2 364 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 CD302Q8IX05 232 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 NPAS3Q8IXF0 933 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 TCEAL8Q8IYN2 117 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 PDILTQ8N807 584 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 GLIS3Q8NEA6 775 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 ZSWIM2Q8NEG5 633 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 ZNF461Q8TAF7 563 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 RSAD2Q8WXG1 361 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 FOXD4L4Q8WXT5 416 aaPredicted RBP8.5□□□□□ -1.05
CDH3-209ENST00000569080 TSPAN18Q96SJ8 248 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 PANK2Q9BZ23 570 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 TRIM9Q9C026 710 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 TNMDQ9H2S6 317 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 MRPL44Q9H9J2 332 aaKnown RBP8.5□□□□□ -1.05
CDH3-209ENST00000569080 RPF1Q9H9Y2 349 aaKnown RBP8.5□□□□□ -1.05
CDH3-209ENST00000569080 PIDD1Q9HB75 910 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 AVENQ9NQS1 362 aaPredicted RBP8.5□□□□□ -1.05
CDH3-209ENST00000569080 TBC1D7Q9P0N9 293 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 IGSF9Q9P2J2 1179 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 TFIP11Q9UBB9 837 aaKnown RBP8.5□□□□□ -1.05
CDH3-209ENST00000569080 DNMT3BQ9UBC3 853 aaKnown RBP8.5□□□□□ -1.05
CDH3-209ENST00000569080 AGO2Q9UKV8 859 aaKnown RBP8.5□□□□□ -1.05
CDH3-209ENST00000569080 DERAQ9Y315 318 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 C2CD2Q9Y426 696 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 NUB1Q9Y5A7 615 aa8.5□□□□□ -1.05
CDH3-209ENST00000569080 H7C4K7 107 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 PIRO00625 290 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 CUTAO60888 179 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 OAZ2O95190 189 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 GCNT3O95395 438 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 NPR3P17342 541 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 TYMPP19971 482 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 FSHRP23945 695 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 HOXD11P31277 338 aaPredicted RBP8.49□□□□□ -1.05
CDH3-209ENST00000569080 GBP2P32456 591 aaPredicted RBP8.49□□□□□ -1.05
CDH3-209ENST00000569080 HOXD13P35453 343 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 LILRA4P59901 499 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 NHLH1Q02575 133 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 TCF15Q12870 199 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 ALCAMQ13740 583 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 TMEM132DQ14C87 1099 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 UVSSAQ2YD98 709 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 CTXN3Q4LDR2 81 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 PRSS36Q5K4E3 855 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 C9orf57Q5W0N0 161 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 TPGS2Q68CL5 300 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 ADALQ6DHV7 355 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 SLFN12LQ6IEE8 588 aa8.49□□□□□ -1.05
CDH3-209ENST00000569080 BRSK2Q8IWQ3 736 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms