RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 POMGNT1Q8WZA1 660 aa22.05■■□□□ 1.12
CLK3-225ENST00000569063 TRIM9Q9C026 710 aa22.05■■□□□ 1.12
CLK3-225ENST00000569063 ASB7Q9H672 318 aa22.05■■□□□ 1.12
CLK3-225ENST00000569063 PIDD1Q9HB75 910 aa22.05■■□□□ 1.12
CLK3-225ENST00000569063 LIMD1Q9UGP4 676 aa22.05■■□□□ 1.12
CLK3-225ENST00000569063 CLUHO75153 1309 aa22.05■■□□□ 1.12
CLK3-225ENST00000569063 H7C4K7 107 aa22.04■■□□□ 1.12
CLK3-225ENST00000569063 M0QZQ0 153 aa22.04■■□□□ 1.12
CLK3-225ENST00000569063 C8AP07357 584 aa22.04■■□□□ 1.12
CLK3-225ENST00000569063 AARSP49588 968 aaKnown RBP eCLIP22.04■■□□□ 1.12
CLK3-225ENST00000569063 SIGLEC14Q08ET2 396 aa22.04■■□□□ 1.12
CLK3-225ENST00000569063 PPM1LQ5SGD2 360 aa22.04■■□□□ 1.12
CLK3-225ENST00000569063 RESP18Q5W5W9 173 aa22.04■■□□□ 1.12
CLK3-225ENST00000569063 JADE1Q6IE81 842 aa22.04■■□□□ 1.12
CLK3-225ENST00000569063 CRELD2Q6UXH1 353 aaPredicted RBP22.04■■□□□ 1.12
CLK3-225ENST00000569063 BMP8AQ7Z5Y6 402 aa22.04■■□□□ 1.12
CLK3-225ENST00000569063 TMEM130Q8N3G9 435 aa22.04■■□□□ 1.12
CLK3-225ENST00000569063 APPL2Q8NEU8 664 aa22.04■■□□□ 1.12
CLK3-225ENST00000569063 ZNF461Q8TAF7 563 aa22.04■■□□□ 1.12
CLK3-225ENST00000569063 FAM212AQ96EL1 285 aa22.04■■□□□ 1.12
CLK3-225ENST00000569063 FGFBP2Q9BYJ0 223 aa22.04■■□□□ 1.12
CLK3-225ENST00000569063 MAGEF1Q9HAY2 307 aa22.04■■□□□ 1.12
CLK3-225ENST00000569063 FAM13BQ9NYF5 915 aa22.04■■□□□ 1.12
CLK3-225ENST00000569063 PCDHB8Q9UN66 801 aa22.04■■□□□ 1.12
CLK3-225ENST00000569063 SORCS3Q9UPU3 1222 aa22.04■■□□□ 1.12
CLK3-225ENST00000569063 ZDHHC9Q9Y397 364 aa22.04■■□□□ 1.12
CLK3-225ENST00000569063 TRIOO75962 3097 aa22.04■■□□□ 1.12
CLK3-225ENST00000569063 TMEM221A6NGB7 291 aa22.03■■□□□ 1.12
CLK3-225ENST00000569063 M0R296 226 aa22.03■■□□□ 1.12
CLK3-225ENST00000569063 POLR2DO15514 142 aaKnown RBP22.03■■□□□ 1.12
CLK3-225ENST00000569063 POU2F2P09086 479 aa22.03■■□□□ 1.12
CLK3-225ENST00000569063 HFE2Q6ZVN8 426 aa22.03■■□□□ 1.12
CLK3-225ENST00000569063 UBALD2Q8IYN6 164 aa22.03■■□□□ 1.12
CLK3-225ENST00000569063 BEST2Q8NFU1 509 aa22.03■■□□□ 1.12
CLK3-225ENST00000569063 C7orf25Q9BPX7 421 aa22.03■■□□□ 1.12
CLK3-225ENST00000569063 TMEM206Q9H813 350 aa22.03■■□□□ 1.12
CLK3-225ENST00000569063 RAPGEFL1Q9UHV5 662 aa22.03■■□□□ 1.12
CLK3-225ENST00000569063 C2CD2Q9Y426 696 aa22.03■■□□□ 1.12
CLK3-225ENST00000569063 N4BP1O75113 896 aaKnown RBP22.02■■□□□ 1.12
CLK3-225ENST00000569063 ABLIM3O94929 683 aa22.02■■□□□ 1.12
CLK3-225ENST00000569063 NFICP08651 508 aa22.02■■□□□ 1.12
CLK3-225ENST00000569063 GARTP22102 1010 aa22.02■■□□□ 1.12
CLK3-225ENST00000569063 PAX3P23760 479 aa22.02■■□□□ 1.12
CLK3-225ENST00000569063 GUCY2FP51841 1108 aa22.02■■□□□ 1.12
CLK3-225ENST00000569063 ROR1Q01973 937 aa22.02■■□□□ 1.12
CLK3-225ENST00000569063 MTMR3Q13615 1198 aa22.02■■□□□ 1.12
CLK3-225ENST00000569063 TMEM132DQ14C87 1099 aa22.02■■□□□ 1.12
CLK3-225ENST00000569063 SYCP3Q8IZU3 236 aa22.02■■□□□ 1.12
CLK3-225ENST00000569063 SLC7A14Q8TBB6 771 aa22.02■■□□□ 1.12
CLK3-225ENST00000569063 FBXL5Q9UKA1 691 aa22.02■■□□□ 1.12
CLK3-225ENST00000569063 CTXN3Q4LDR2 81 aa22.01■■□□□ 1.11
CLK3-225ENST00000569063 ZNF280DQ6N043 979 aa22.01■■□□□ 1.11
CLK3-225ENST00000569063 STXBP4Q6ZWJ1 553 aa22.01■■□□□ 1.11
CLK3-225ENST00000569063 ASIC4Q96FT7 647 aa22.01■■□□□ 1.11
CLK3-225ENST00000569063 PYM1Q9BRP8 204 aaKnown RBP22.01■■□□□ 1.11
CLK3-225ENST00000569063 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.01■■□□□ 1.11
CLK3-225ENST00000569063 EPS15L1Q9UBC2 864 aa22.01■■□□□ 1.11
CLK3-225ENST00000569063 HCN4Q9Y3Q4 1203 aa22.01■■□□□ 1.11
CLK3-225ENST00000569063 ARIH1Q9Y4X5 557 aaPredicted RBP22.01■■□□□ 1.11
CLK3-225ENST00000569063 ANO9A1A5B4 782 aa22■■□□□ 1.11
CLK3-225ENST00000569063 WDR27A2RRH5 827 aa22■■□□□ 1.11
CLK3-225ENST00000569063 PIRO00625 290 aa22■■□□□ 1.11
CLK3-225ENST00000569063 XYLBO75191 536 aa22■■□□□ 1.11
CLK3-225ENST00000569063 PRPF6O94906 941 aaKnown RBP22■■□□□ 1.11
CLK3-225ENST00000569063 OAZ2O95190 189 aa22■■□□□ 1.11
CLK3-225ENST00000569063 IL18RAPO95256 599 aa22■■□□□ 1.11
CLK3-225ENST00000569063 LDHAP00338 332 aaKnown RBP22■■□□□ 1.11
CLK3-225ENST00000569063 ASGR2P07307 311 aa22■■□□□ 1.11
CLK3-225ENST00000569063 ATF2P15336 505 aa22■■□□□ 1.11
CLK3-225ENST00000569063 LILRA4P59901 499 aa22■■□□□ 1.11
CLK3-225ENST00000569063 ASIC1P78348 528 aa22■■□□□ 1.11
CLK3-225ENST00000569063 C9orf57Q5W0N0 161 aa22■■□□□ 1.11
CLK3-225ENST00000569063 HPS3Q969F9 1004 aa22■■□□□ 1.11
CLK3-225ENST00000569063 MFSD14AQ96MC6 490 aa22■■□□□ 1.11
CLK3-225ENST00000569063 FAM213AQ9BRX8 229 aa22■■□□□ 1.11
CLK3-225ENST00000569063 OXCT2Q9BYC2 517 aaPredicted RBP22■■□□□ 1.11
CLK3-225ENST00000569063 KCNH3Q9ULD8 1083 aa22■■□□□ 1.11
CLK3-225ENST00000569063 PPEF2O14830 753 aa21.99■■□□□ 1.11
CLK3-225ENST00000569063 CCL16O15467 120 aa21.99■■□□□ 1.11
CLK3-225ENST00000569063 GBP2P32456 591 aaPredicted RBP21.99■■□□□ 1.11
CLK3-225ENST00000569063 YWHAHQ04917 246 aaPredicted RBP21.99■■□□□ 1.11
CLK3-225ENST00000569063 TPGS2Q68CL5 300 aa21.99■■□□□ 1.11
CLK3-225ENST00000569063 DSTYKQ6XUX3 929 aa21.99■■□□□ 1.11
CLK3-225ENST00000569063 GRASPQ7Z6J2 395 aaPredicted RBP21.99■■□□□ 1.11
CLK3-225ENST00000569063 NT5DC4Q86YG4 428 aa21.99■■□□□ 1.11
CLK3-225ENST00000569063 GLIS3Q8NEA6 775 aa21.99■■□□□ 1.11
CLK3-225ENST00000569063 PBXIP1Q96AQ6 731 aa21.99■■□□□ 1.11
CLK3-225ENST00000569063 MYADMQ96S97 322 aa21.99■■□□□ 1.11
CLK3-225ENST00000569063 KCNK12Q9HB15 430 aa21.99■■□□□ 1.11
CLK3-225ENST00000569063 IGSF9Q9P2J2 1179 aa21.99■■□□□ 1.11
CLK3-225ENST00000569063 MAFFQ9ULX9 164 aa21.99■■□□□ 1.11
CLK3-225ENST00000569063 ANK1P16157 1881 aa21.98■■□□□ 1.11
CLK3-225ENST00000569063 TECTAO75443 2155 aa21.98■■□□□ 1.11
CLK3-225ENST00000569063 ARHGEF37A1IGU5 675 aa21.98■■□□□ 1.11
CLK3-225ENST00000569063 EIF3DO15371 548 aaKnown RBP eCLIP21.98■■□□□ 1.11
CLK3-225ENST00000569063 FSHRP23945 695 aa21.98■■□□□ 1.11
CLK3-225ENST00000569063 ELF1P32519 619 aa21.98■■□□□ 1.11
CLK3-225ENST00000569063 KRT85P78386 507 aa21.98■■□□□ 1.11
CLK3-225ENST00000569063 EHHADHQ08426 723 aa21.98■■□□□ 1.11
CLK3-225ENST00000569063 UNC13DQ70J99 1090 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms