RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 NELL1Q92832 810 aa16.46■□□□□ 0.23
COMMD4-223ENST00000568301 CLDN23Q96B33 292 aa16.46■□□□□ 0.23
COMMD4-223ENST00000568301 MCRS1Q96EZ8 462 aa16.46■□□□□ 0.23
COMMD4-223ENST00000568301 RUSC1Q9BVN2 902 aa16.46■□□□□ 0.23
COMMD4-223ENST00000568301 MAFFQ9ULX9 164 aa16.46■□□□□ 0.23
COMMD4-223ENST00000568301 NUB1Q9Y5A7 615 aa16.46■□□□□ 0.23
COMMD4-223ENST00000568301 PDCD11Q14690 1871 aaKnown RBP16.46■□□□□ 0.22
COMMD4-223ENST00000568301 F5P12259 2224 aa16.45■□□□□ 0.22
COMMD4-223ENST00000568301 SHISA7A6NL88 538 aa16.45■□□□□ 0.22
COMMD4-223ENST00000568301 PP2D1A8MPX8 630 aa16.45■□□□□ 0.22
COMMD4-223ENST00000568301 ZNF197O14709 1029 aa16.45■□□□□ 0.22
COMMD4-223ENST00000568301 LILRB5O75023 590 aa16.45■□□□□ 0.22
COMMD4-223ENST00000568301 GUCY2CP25092 1073 aa16.45■□□□□ 0.22
COMMD4-223ENST00000568301 FZD5Q13467 585 aa16.45■□□□□ 0.22
COMMD4-223ENST00000568301 ELSPBP1Q96BH3 223 aa16.45■□□□□ 0.22
COMMD4-223ENST00000568301 SUSD3Q96L08 255 aa16.45■□□□□ 0.22
COMMD4-223ENST00000568301 MMTAG2Q9BU76 263 aaKnown RBP16.45■□□□□ 0.22
COMMD4-223ENST00000568301 HEBP1Q9NRV9 189 aa16.45■□□□□ 0.22
COMMD4-223ENST00000568301 FBXL5Q9UKA1 691 aa16.45■□□□□ 0.22
COMMD4-223ENST00000568301 SMG5Q9UPR3 1016 aaKnown RBP16.45■□□□□ 0.22
COMMD4-223ENST00000568301 ACACBO00763 2458 aa16.44■□□□□ 0.22
COMMD4-223ENST00000568301 SFI1A8K8P3 1242 aa16.44■□□□□ 0.22
COMMD4-223ENST00000568301 SLC16A4O15374 487 aa16.44■□□□□ 0.22
COMMD4-223ENST00000568301 NCAM2O15394 837 aa16.44■□□□□ 0.22
COMMD4-223ENST00000568301 TOM1L1O75674 476 aa16.44■□□□□ 0.22
COMMD4-223ENST00000568301 KRT37O76014 449 aa16.44■□□□□ 0.22
COMMD4-223ENST00000568301 CDC25AP30304 524 aa16.44■□□□□ 0.22
COMMD4-223ENST00000568301 SMTNP53814 917 aa16.44■□□□□ 0.22
COMMD4-223ENST00000568301 STRN3Q13033 797 aa16.44■□□□□ 0.22
COMMD4-223ENST00000568301 SLC10A6Q3KNW5 377 aa16.44■□□□□ 0.22
COMMD4-223ENST00000568301 PRSS36Q5K4E3 855 aa16.44■□□□□ 0.22
COMMD4-223ENST00000568301 TANGO2Q6ICL3 276 aa16.44■□□□□ 0.22
COMMD4-223ENST00000568301 ZPBP2Q6X784 338 aa16.44■□□□□ 0.22
COMMD4-223ENST00000568301 KCNK18Q7Z418 384 aa16.44■□□□□ 0.22
COMMD4-223ENST00000568301 GPR161Q8N6U8 529 aaKnown RBP16.44■□□□□ 0.22
COMMD4-223ENST00000568301 APPL2Q8NEU8 664 aa16.44■□□□□ 0.22
COMMD4-223ENST00000568301 C18orf25Q96B23 403 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-223ENST00000568301 KIF2CQ99661 725 aa16.44■□□□□ 0.22
COMMD4-223ENST00000568301 EPC1Q9H2F5 836 aa16.44■□□□□ 0.22
COMMD4-223ENST00000568301 CYP4F11Q9HBI6 524 aa16.44■□□□□ 0.22
COMMD4-223ENST00000568301 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.44■□□□□ 0.22
COMMD4-223ENST00000568301 MRPS17Q9Y2R5 130 aaKnown RBP16.44■□□□□ 0.22
COMMD4-223ENST00000568301 INSL5Q9Y5Q6 135 aa16.44■□□□□ 0.22
COMMD4-223ENST00000568301 MEFVO15553 781 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-223ENST00000568301 SEC24AO95486 1093 aa16.43■□□□□ 0.22
COMMD4-223ENST00000568301 PLS3P13797 630 aa16.43■□□□□ 0.22
COMMD4-223ENST00000568301 CEBPBP17676 345 aa16.43■□□□□ 0.22
COMMD4-223ENST00000568301 TGM1P22735 817 aa16.43■□□□□ 0.22
COMMD4-223ENST00000568301 RPS9P46781 194 aaKnown RBP16.43■□□□□ 0.22
COMMD4-223ENST00000568301 ARPP19P56211 112 aa16.43■□□□□ 0.22
COMMD4-223ENST00000568301 CTXN3Q4LDR2 81 aa16.43■□□□□ 0.22
COMMD4-223ENST00000568301 HYIQ5T013 277 aa16.43■□□□□ 0.22
COMMD4-223ENST00000568301 CYP4A22Q5TCH4 519 aa16.43■□□□□ 0.22
COMMD4-223ENST00000568301 ZNF852Q6ZMS4 543 aa16.43■□□□□ 0.22
COMMD4-223ENST00000568301 TMEM161BQ8NDZ6 487 aa16.43■□□□□ 0.22
COMMD4-223ENST00000568301 DNASE1L2Q92874 299 aa16.43■□□□□ 0.22
COMMD4-223ENST00000568301 SECISBP2LQ93073 1101 aaKnown RBP16.43■□□□□ 0.22
COMMD4-223ENST00000568301 ZBTB45Q96K62 511 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-223ENST00000568301 TBC1D32Q96NH3 1257 aa16.43■□□□□ 0.22
COMMD4-223ENST00000568301 CORO1BQ9BR76 489 aa16.43■□□□□ 0.22
COMMD4-223ENST00000568301 PLEKHA5Q9HAU0 1116 aa16.43■□□□□ 0.22
COMMD4-223ENST00000568301 ZFP14Q9HCL3 533 aa16.43■□□□□ 0.22
COMMD4-223ENST00000568301 PRMT8Q9NR22 394 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-223ENST00000568301 KCND2Q9NZV8 630 aa16.43■□□□□ 0.22
COMMD4-223ENST00000568301 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-223ENST00000568301 CFAP47Q6ZTR5 3102 aa16.43■□□□□ 0.22
COMMD4-223ENST00000568301 CLDN3O15551 220 aa16.42■□□□□ 0.22
COMMD4-223ENST00000568301 CENPBP07199 599 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-223ENST00000568301 MAPTP10636 758 aaKnown RBP16.42■□□□□ 0.22
COMMD4-223ENST00000568301 SDHBP21912 280 aa16.42■□□□□ 0.22
COMMD4-223ENST00000568301 ADCY1Q08828 1119 aa16.42■□□□□ 0.22
COMMD4-223ENST00000568301 MTAPQ13126 283 aa16.42■□□□□ 0.22
COMMD4-223ENST00000568301 NOLC1Q14978 699 aaKnown RBP eCLIP16.42■□□□□ 0.22
COMMD4-223ENST00000568301 RILPL1Q5EBL4 403 aa16.42■□□□□ 0.22
COMMD4-223ENST00000568301 IQCEQ6IPM2 695 aa16.42■□□□□ 0.22
COMMD4-223ENST00000568301 ZNF280DQ6N043 979 aa16.42■□□□□ 0.22
COMMD4-223ENST00000568301 PDZD4Q76G19 769 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-223ENST00000568301 ELMOD1Q8N336 334 aa16.42■□□□□ 0.22
COMMD4-223ENST00000568301 SYT2Q8N9I0 419 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-223ENST00000568301 LEMD2Q8NC56 503 aa16.42■□□□□ 0.22
COMMD4-223ENST00000568301 DDX12PQ92771 950 aa16.42■□□□□ 0.22
COMMD4-223ENST00000568301 ZNF512Q96ME7 567 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-223ENST00000568301 PARD6AQ9NPB6 346 aa16.42■□□□□ 0.22
COMMD4-223ENST00000568301 AFF4Q9UHB7 1163 aaKnown RBP16.42■□□□□ 0.22
COMMD4-223ENST00000568301 KIF3AQ9Y496 699 aa16.42■□□□□ 0.22
COMMD4-223ENST00000568301 DCDC2BA2VCK2 349 aa16.41■□□□□ 0.22
COMMD4-223ENST00000568301 NRG2O14511 850 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-223ENST00000568301 OAZ2O95190 189 aa16.41■□□□□ 0.22
COMMD4-223ENST00000568301 HARSP12081 509 aaKnown RBP16.41■□□□□ 0.22
COMMD4-223ENST00000568301 FCARP24071 287 aa16.41■□□□□ 0.22
COMMD4-223ENST00000568301 MARCKSP29966 332 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-223ENST00000568301 MCM4P33991 863 aa16.41■□□□□ 0.22
COMMD4-223ENST00000568301 ATP2C1P98194 919 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-223ENST00000568301 MCL1Q07820 350 aa16.41■□□□□ 0.22
COMMD4-223ENST00000568301 FAM78AQ5JUQ0 283 aa16.41■□□□□ 0.22
COMMD4-223ENST00000568301 ZNF687Q8N1G0 1237 aa16.41■□□□□ 0.22
COMMD4-223ENST00000568301 KCNN1Q92952 543 aa16.41■□□□□ 0.22
COMMD4-223ENST00000568301 TCEAL4Q96EI5 215 aa16.41■□□□□ 0.22
COMMD4-223ENST00000568301 ASB16Q96NS5 453 aa16.41■□□□□ 0.22
COMMD4-223ENST00000568301 TRMT61BQ9BVS5 477 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms