RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 KCNH3Q9ULD8 1083 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 TIMM13Q9Y5L4 95 aaPredicted RBP10.35□□□□□ -0.75
SF3B3-211ENST00000568291 GVINP1Q7Z2Y8 2422 aa10.35□□□□□ -0.75
SF3B3-211ENST00000568291 TTC26A0AVF1 554 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 PROB1E7EW31 1015 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 OGTO15294 1046 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 TGM5O43548 720 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 RFPL2O75678 378 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 PIGRP01833 764 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 NFICP08651 508 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 PDIA4P13667 645 aaKnown RBP10.34□□□□□ -0.75
SF3B3-211ENST00000568291 KCNE1P15382 129 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 GAP43P17677 238 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 HOXD13P35453 343 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 VASPP50552 380 aaPredicted RBP10.34□□□□□ -0.75
SF3B3-211ENST00000568291 ARPP19P56211 112 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 KRT85P78386 507 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 L1TD1Q5T7N2 865 aaKnown RBP10.34□□□□□ -0.75
SF3B3-211ENST00000568291 ATL3Q6DD88 541 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 JADE1Q6IE81 842 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 CRELD2Q6UXH1 353 aaPredicted RBP10.34□□□□□ -0.75
SF3B3-211ENST00000568291 OTOP3Q7RTS5 596 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 ASCL5Q7RTU5 278 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 NELFCDQ8IXH7 590 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 SYCP3Q8IZU3 236 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 FLCNQ8NFG4 579 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 LNX1Q8TBB1 728 aaPredicted RBP10.34□□□□□ -0.75
SF3B3-211ENST00000568291 POMGNT1Q8WZA1 660 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 PAGE5Q96GU1 130 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 ACCSQ96QU6 501 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 CLSTN3Q9BQT9 956 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 CBWD1Q9BRT8 395 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 FAM213AQ9BRX8 229 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 TTPALQ9BTX7 342 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 GOLPH3LQ9H4A5 285 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 RPF1Q9H9Y2 349 aaKnown RBP10.34□□□□□ -0.75
SF3B3-211ENST00000568291 SLC39A2Q9NP94 309 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 MAN1C1Q9NR34 630 aa10.34□□□□□ -0.75
SF3B3-211ENST00000568291 CPSF3Q9UKF6 684 aaKnown RBP10.34□□□□□ -0.75
SF3B3-211ENST00000568291 AGO2Q9UKV8 859 aaKnown RBP10.34□□□□□ -0.75
SF3B3-211ENST00000568291 SF3B1O75533 1304 aaKnown RBP eCLIP10.33□□□□□ -0.76
SF3B3-211ENST00000568291 VWA8A3KMH1 1905 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 FANCMQ8IYD8 2048 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 FRMD3A2A2Y4 597 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 PRR23AA6NEV1 266 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 ACTN4O43707 911 aaKnown RBP10.33□□□□□ -0.76
SF3B3-211ENST00000568291 ADH1AP07327 375 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 OR1D2P34982 312 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 NBL1P41271 181 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 CLCN5P51795 746 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 NDUFA8P51970 172 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 PSMD5Q16401 504 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 C15orf39Q6ZRI6 1047 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 CCDC65Q8IXS2 484 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 C7orf25Q9BPX7 421 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 TNMDQ9H2S6 317 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 ST6GALNAC4Q9H4F1 302 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 RXFP1Q9HBX9 757 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 FBXL21Q9UKT6 434 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 DUSP12Q9UNI6 340 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 NUB1Q9Y5A7 615 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 PCDHB13Q9Y5F0 798 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 TRIP11Q15643 1979 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 CLUHO75153 1309 aa10.33□□□□□ -0.76
SF3B3-211ENST00000568291 CCDC195A0A1B0GUA6 201 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 CLIC2O15247 247 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 GLUD1P00367 558 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 CMA1P23946 247 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 MCM4P33991 863 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 PPP2R3AQ06190 1150 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 TDGQ13569 410 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 ZBTB6Q15916 424 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 LMBRD2Q68DH5 695 aaPredicted RBP10.32□□□□□ -0.76
SF3B3-211ENST00000568291 ELMSAN1Q6PJG2 1045 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 FRMD5Q7Z6J6 570 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 CEP57L1Q8IYX8 460 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 FSIP1Q8NA03 581 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 RDH13Q8NBN7 331 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 CMASQ8NFW8 434 aaPredicted RBP10.32□□□□□ -0.76
SF3B3-211ENST00000568291 CUEDC2Q9H467 287 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 OLFML3Q9NRN5 406 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 SLC38A7Q9NVC3 462 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 SEL1LQ9UBV2 794 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 SSX2IPQ9Y2D8 614 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 CDY1Q9Y6F8 540 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 STYXL1Q9Y6J8 313 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 USP34Q70CQ2 3546 aa10.32□□□□□ -0.76
SF3B3-211ENST00000568291 ZMYM2Q9UBW7 1377 aa10.31□□□□□ -0.76
SF3B3-211ENST00000568291 SPTLC1O15269 473 aa10.31□□□□□ -0.76
SF3B3-211ENST00000568291 N4BP1O75113 896 aaKnown RBP10.31□□□□□ -0.76
SF3B3-211ENST00000568291 SLFN14P0C7P3 912 aa10.31□□□□□ -0.76
SF3B3-211ENST00000568291 AOC1P19801 751 aa10.31□□□□□ -0.76
SF3B3-211ENST00000568291 FGFR3P22607 806 aa10.31□□□□□ -0.76
SF3B3-211ENST00000568291 GBP2P32456 591 aaPredicted RBP10.31□□□□□ -0.76
SF3B3-211ENST00000568291 NTHL1P78549 312 aa10.31□□□□□ -0.76
SF3B3-211ENST00000568291 AMPD3Q01432 767 aa10.31□□□□□ -0.76
SF3B3-211ENST00000568291 FAM26FQ5R3K3 315 aa10.31□□□□□ -0.76
SF3B3-211ENST00000568291 SLFN12LQ6IEE8 588 aa10.31□□□□□ -0.76
SF3B3-211ENST00000568291 LILRA6Q6PI73 481 aa10.31□□□□□ -0.76
SF3B3-211ENST00000568291 EFCAB13Q8IY85 973 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms