RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 ABLIM1O14639 778 aa15.7■□□□□ 0.1
COMMD4-221ENST00000567935 FAM189A1O60320 539 aa15.7■□□□□ 0.1
COMMD4-221ENST00000567935 ABL1P00519 1130 aa15.7■□□□□ 0.1
COMMD4-221ENST00000567935 AKR1A1P14550 325 aa15.7■□□□□ 0.1
COMMD4-221ENST00000567935 POU3F3P20264 500 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-221ENST00000567935 TBXAS1P24557 533 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-221ENST00000567935 PIK3CAP42336 1068 aa15.7■□□□□ 0.1
COMMD4-221ENST00000567935 ACLYP53396 1101 aa15.7■□□□□ 0.1
COMMD4-221ENST00000567935 BPIFB4P59827 614 aa15.7■□□□□ 0.1
COMMD4-221ENST00000567935 AMPD2Q01433 879 aa15.7■□□□□ 0.1
COMMD4-221ENST00000567935 ENOX2Q16206 610 aaKnown RBP15.7■□□□□ 0.1
COMMD4-221ENST00000567935 TMEM132AQ24JP5 1023 aa15.7■□□□□ 0.1
COMMD4-221ENST00000567935 ZNF568Q3ZCX4 644 aa15.7■□□□□ 0.1
COMMD4-221ENST00000567935 TRAPPC11Q7Z392 1133 aa15.7■□□□□ 0.1
COMMD4-221ENST00000567935 HLA-CQ95604 372 aa15.7■□□□□ 0.1
COMMD4-221ENST00000567935 FAXDC2Q96IV6 333 aa15.7■□□□□ 0.1
COMMD4-221ENST00000567935 PHOX2BQ99453 314 aa15.7■□□□□ 0.1
COMMD4-221ENST00000567935 POP1Q99575 1024 aaKnown RBP15.7■□□□□ 0.1
COMMD4-221ENST00000567935 IMPG2Q9BZV3 1241 aa15.7■□□□□ 0.1
COMMD4-221ENST00000567935 IFT122Q9HBG6 1241 aa15.7■□□□□ 0.1
COMMD4-221ENST00000567935 PDE11AQ9HCR9 933 aa15.7■□□□□ 0.1
COMMD4-221ENST00000567935 IL23AQ9NPF7 189 aa15.7■□□□□ 0.1
COMMD4-221ENST00000567935 CPSF3Q9UKF6 684 aaKnown RBP15.7■□□□□ 0.1
COMMD4-221ENST00000567935 SMIM35A0A1B0GVV1 85 aa15.69■□□□□ 0.1
COMMD4-221ENST00000567935 HAS3O00219 553 aa15.69■□□□□ 0.1
COMMD4-221ENST00000567935 DDX3XO00571 662 aaKnown RBP eCLIP15.69■□□□□ 0.1
COMMD4-221ENST00000567935 B4GALT4O60513 344 aa15.69■□□□□ 0.1
COMMD4-221ENST00000567935 HLA-DRAP01903 254 aa15.69■□□□□ 0.1
COMMD4-221ENST00000567935 EDN1P05305 212 aa15.69■□□□□ 0.1
COMMD4-221ENST00000567935 CKAP4Q07065 602 aaKnown RBP15.69■□□□□ 0.1
COMMD4-221ENST00000567935 BIRC3Q13489 604 aa15.69■□□□□ 0.1
COMMD4-221ENST00000567935 OTOP2Q7RTS6 562 aa15.69■□□□□ 0.1
COMMD4-221ENST00000567935 LMBR1Q8WVP7 490 aa15.69■□□□□ 0.1
COMMD4-221ENST00000567935 UBXN4Q92575 508 aa15.69■□□□□ 0.1
COMMD4-221ENST00000567935 ZNF516Q92618 1163 aa15.69■□□□□ 0.1
COMMD4-221ENST00000567935 RPGRIP1Q96KN7 1286 aa15.69■□□□□ 0.1
COMMD4-221ENST00000567935 KREMEN1Q96MU8 473 aa15.69■□□□□ 0.1
COMMD4-221ENST00000567935 AGPAT1Q99943 283 aa15.69■□□□□ 0.1
COMMD4-221ENST00000567935 CARD6Q9BX69 1037 aa15.69■□□□□ 0.1
COMMD4-221ENST00000567935 CERS4Q9HA82 394 aa15.69■□□□□ 0.1
COMMD4-221ENST00000567935 TOPORSQ9NS56 1045 aaPredicted RBP15.69■□□□□ 0.1
COMMD4-221ENST00000567935 PCDHGC5Q9Y5F6 944 aa15.69■□□□□ 0.1
COMMD4-221ENST00000567935 SAR1BQ9Y6B6 198 aa15.69■□□□□ 0.1
COMMD4-221ENST00000567935 TRANK1O15050 2925 aa15.68■□□□□ 0.1
COMMD4-221ENST00000567935 A0A087WZ62 844 aa15.68■□□□□ 0.1
COMMD4-221ENST00000567935 MBLAC1A4D2B0 266 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-221ENST00000567935 DUSP11O75319 330 aaKnown RBP15.68■□□□□ 0.1
COMMD4-221ENST00000567935 LRRN2O75325 713 aa15.68■□□□□ 0.1
COMMD4-221ENST00000567935 TADA3O75528 432 aa15.68■□□□□ 0.1
COMMD4-221ENST00000567935 FGBP02675 491 aa15.68■□□□□ 0.1
COMMD4-221ENST00000567935 CLTAP09496 248 aa15.68■□□□□ 0.1
COMMD4-221ENST00000567935 TMEM253P0C7T8 217 aa15.68■□□□□ 0.1
COMMD4-221ENST00000567935 GNAT1P11488 350 aa15.68■□□□□ 0.1
COMMD4-221ENST00000567935 TCP1P17987 556 aaKnown RBP15.68■□□□□ 0.1
COMMD4-221ENST00000567935 CYP2C18P33260 490 aa15.68■□□□□ 0.1
COMMD4-221ENST00000567935 CDK7P50613 346 aa15.68■□□□□ 0.1
COMMD4-221ENST00000567935 NCBP1Q09161 790 aaKnown RBP15.68■□□□□ 0.1
COMMD4-221ENST00000567935 MFSD10Q14728 455 aa15.68■□□□□ 0.1
COMMD4-221ENST00000567935 DUOXA2Q1HG44 320 aa15.68■□□□□ 0.1
COMMD4-221ENST00000567935 MARCH8Q5T0T0 291 aa15.68■□□□□ 0.1
COMMD4-221ENST00000567935 TDRD10Q5VZ19 366 aaKnown RBP15.68■□□□□ 0.1
COMMD4-221ENST00000567935 PPP1R2P3Q6NXS1 205 aa15.68■□□□□ 0.1
COMMD4-221ENST00000567935 NFRKBQ6P4R8 1299 aa15.68■□□□□ 0.1
COMMD4-221ENST00000567935 MTERF4Q7Z6M4 381 aaKnown RBP15.68■□□□□ 0.1
COMMD4-221ENST00000567935 ZNF677Q86XU0 584 aa15.68■□□□□ 0.1
COMMD4-221ENST00000567935 FDXACB1Q9BRP7 624 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-221ENST00000567935 TSEN34Q9BSV6 310 aaKnown RBP15.68■□□□□ 0.1
COMMD4-221ENST00000567935 MTIF3Q9H2K0 278 aaKnown RBP15.68■□□□□ 0.1
COMMD4-221ENST00000567935 PCDHA11Q9Y5I1 949 aa15.68■□□□□ 0.1
COMMD4-221ENST00000567935 DUSP10Q9Y6W6 482 aa15.68■□□□□ 0.1
COMMD4-221ENST00000567935 MYH10P35580 1976 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 MYADML2A6NDP7 307 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 ADCY6O43306 1168 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 PHACTR2O75167 634 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 ERLIN2O94905 339 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 SMIM10L2AP0DMW4 78 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 SMIM10L2BP0DMW5 78 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 HARSP12081 509 aaKnown RBP15.67■□□□□ 0.1
COMMD4-221ENST00000567935 GZMAP12544 262 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 PSEN2P49810 448 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 PDE6CP51160 858 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 NAP1L1P55209 391 aaKnown RBP15.67■□□□□ 0.1
COMMD4-221ENST00000567935 AMHR2Q16671 573 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 ZBTB33Q86T24 672 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 KIAA0319LQ8IZA0 1049 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 LNX1Q8TBB1 728 aaPredicted RBP15.67■□□□□ 0.1
COMMD4-221ENST00000567935 NLRP7Q8WX94 980 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 CTNNBL1Q8WYA6 563 aaPredicted RBP15.67■□□□□ 0.1
COMMD4-221ENST00000567935 ANKRD7Q92527 254 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 TAF4BQ92750 862 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 GOLGA1Q92805 767 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 SCLT1Q96NL6 688 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 ADPGKQ9BRR6 497 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 GCOM2Q9BZD3 368 aaPredicted RBP15.67■□□□□ 0.1
COMMD4-221ENST00000567935 CDT1Q9H211 546 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 ASB7Q9H672 318 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 RPF1Q9H9Y2 349 aaKnown RBP15.67■□□□□ 0.1
COMMD4-221ENST00000567935 RNF14Q9UBS8 474 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 TFR2Q9UP52 801 aa15.67■□□□□ 0.1
COMMD4-221ENST00000567935 CAPN6Q9Y6Q1 641 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms