RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 MYH11P35749 1972 aa13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 PTPRZ1P23471 2315 aaPredicted RBP13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 KMT2EQ8IZD2 1858 aa13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 MYMKA6NI61 221 aa13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 K7ELQ4 463 aaPredicted RBP13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 SYN3O14994 580 aa13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 OGTO15294 1046 aa13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 GALR2O43603 387 aaPredicted RBP13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 LRG1P02750 347 aa13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 OR4Q2P0C623 313 aa13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 RFX1P22670 979 aa13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 ACOT2P49753 483 aa13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 UVSSAQ2YD98 709 aa13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 RRAGBQ5VZM2 374 aa13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 SLC8B1Q6J4K2 584 aa13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 DSTYKQ6XUX3 929 aa13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 KRI1Q8N9T8 703 aaKnown RBP13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 ZNF461Q8TAF7 563 aa13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 PRRX2Q99811 253 aa13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 KXD1Q9BQD3 176 aa13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 CORO1BQ9BR76 489 aa13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 UBQLN1Q9UMX0 589 aaKnown RBP13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 MRPS23Q9Y3D9 190 aaKnown RBP13.3□□□□□ -0.28
GTF3C1-208ENST00000567843 CITO14578 2027 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 A0A0B4J269 797 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 ANHXE9PGG2 379 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 H7C4K7 107 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 FAM189A1O60320 539 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 TBC1D4O60343 1298 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 ABLIM3O94929 683 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 PIGRP01833 764 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 RHOP08100 348 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 NFICP08651 508 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 SRFP11831 508 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 CPB1P15086 417 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 HOXA9P31269 272 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 GPC5P78333 572 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 GTF2BQ00403 316 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 MRPL58Q14197 206 aaKnown RBP13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 ZBTB6Q15916 424 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 SLC5A9Q2M3M2 681 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 FOXD4L6Q3SYB3 417 aaPredicted RBP13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 ADALQ6DHV7 355 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 JADE1Q6IE81 842 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 ZNF280DQ6N043 979 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 POTEHQ6S545 545 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 FOXD4L3Q6VB84 417 aaPredicted RBP13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 MAP4K3Q8IVH8 894 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 NPAS3Q8IXF0 933 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 PDILTQ8N807 584 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 APPL2Q8NEU8 664 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 TCEAL4Q96EI5 215 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 PGLYRP2Q96PD5 576 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 PLEKHA5Q9HAU0 1116 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 TFIP11Q9UBB9 837 aaKnown RBP13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 CPSF3Q9UKF6 684 aaKnown RBP13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 PCDHB8Q9UN66 801 aa13.29□□□□□ -0.28
GTF3C1-208ENST00000567843 RIF1Q5UIP0 2472 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 A0A087X0B3 334 aa13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 NRG2O14511 850 aaPredicted RBP13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 STX6O43752 255 aa13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 IDEP14735 1019 aa13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 ATF2P15336 505 aa13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 CEBPBP17676 345 aa13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 AOC1P19801 751 aa13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 TXLNAP40222 546 aa13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 CLCN5P51795 746 aa13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 ADCY1Q08828 1119 aa13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 KCNA1Q09470 495 aa13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 RNF19BQ6ZMZ0 732 aa13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 SV2BQ7L1I2 683 aa13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 HS6ST3Q8IZP7 471 aa13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 INTS4Q96HW7 963 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 MRPL44Q9H9J2 332 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 TBC1D17Q9HA65 648 aa13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 WNT16Q9UBV4 365 aa13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 DAXXQ9UER7 740 aaPredicted RBP13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 INSL5Q9Y5Q6 135 aa13.28□□□□□ -0.28
GTF3C1-208ENST00000567843 SPTLC1O15269 473 aa13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 GJA1P17302 382 aa13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 PTPN2P17706 415 aa13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 CYP3A5P20815 502 aa13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 LRPAP1P30533 357 aa13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 STAT6P42226 847 aa13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 YWHAHQ04917 246 aaPredicted RBP13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 TWF1Q12792 350 aa13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 SNW1Q13573 536 aaKnown RBP13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 SLC39A14Q15043 492 aa13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 STK38Q15208 465 aa13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 SPATA1Q5VX52 437 aa13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 ZNF720Q7Z2F6 126 aa13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 USP37Q86T82 979 aa13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 SPRYD3Q8NCJ5 442 aa13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 ZSWIM2Q8NEG5 633 aa13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 BEST2Q8NFU1 509 aa13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 NOC3LQ8WTT2 800 aaKnown RBP13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 NXPE3Q969Y0 559 aa13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 DNAJC19Q96DA6 116 aa13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 FAM84AQ96KN4 292 aa13.27□□□□□ -0.29
GTF3C1-208ENST00000567843 TMEM209Q96SK2 561 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms