RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 TDGQ13569 410 aa11.33□□□□□ -0.6
LINC00564-201ENST00000567258 NOLC1Q14978 699 aaKnown RBP eCLIP11.33□□□□□ -0.6
LINC00564-201ENST00000567258 RTP2Q5QGT7 225 aa11.33□□□□□ -0.6
LINC00564-201ENST00000567258 ANKS3Q6ZW76 656 aa11.33□□□□□ -0.6
LINC00564-201ENST00000567258 KCNK18Q7Z418 384 aa11.33□□□□□ -0.6
LINC00564-201ENST00000567258 DAW1Q8N136 415 aa11.33□□□□□ -0.6
LINC00564-201ENST00000567258 SPIRE2Q8WWL2 714 aa11.33□□□□□ -0.6
LINC00564-201ENST00000567258 HPS1Q92902 700 aa11.33□□□□□ -0.6
LINC00564-201ENST00000567258 PPP1R10Q96QC0 940 aaKnown RBP11.33□□□□□ -0.6
LINC00564-201ENST00000567258 NTPCRQ9BSD7 190 aaKnown RBP11.33□□□□□ -0.6
LINC00564-201ENST00000567258 RHOBTB2Q9BYZ6 727 aa11.33□□□□□ -0.6
LINC00564-201ENST00000567258 ZHX3Q9H4I2 956 aa11.33□□□□□ -0.6
LINC00564-201ENST00000567258 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.33□□□□□ -0.6
LINC00564-201ENST00000567258 ODF2LQ9ULJ1 636 aa11.33□□□□□ -0.6
LINC00564-201ENST00000567258 POLIQ9UNA4 740 aa11.33□□□□□ -0.6
LINC00564-201ENST00000567258 ZDBF2Q9HCK1 2354 aa11.33□□□□□ -0.6
LINC00564-201ENST00000567258 TCHHQ07283 1943 aa11.33□□□□□ -0.6
LINC00564-201ENST00000567258 TMEM189-UBE2V1I3L0A0 370 aa11.32□□□□□ -0.6
LINC00564-201ENST00000567258 GPR37O15354 613 aa11.32□□□□□ -0.6
LINC00564-201ENST00000567258 XPOTO43592 962 aaKnown RBP11.32□□□□□ -0.6
LINC00564-201ENST00000567258 TBCAO75347 108 aaKnown RBP11.32□□□□□ -0.6
LINC00564-201ENST00000567258 ZMYND10O75800 440 aa11.32□□□□□ -0.6
LINC00564-201ENST00000567258 HNRNPA1P09651 372 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC00564-201ENST00000567258 ELF1P32519 619 aa11.32□□□□□ -0.6
LINC00564-201ENST00000567258 TXLNAP40222 546 aa11.32□□□□□ -0.6
LINC00564-201ENST00000567258 LIG4P49917 911 aa11.32□□□□□ -0.6
LINC00564-201ENST00000567258 SLC12A3P55017 1021 aa11.32□□□□□ -0.6
LINC00564-201ENST00000567258 MAPK7Q13164 816 aa11.32□□□□□ -0.6
LINC00564-201ENST00000567258 SF3A1Q15459 793 aaKnown RBP11.32□□□□□ -0.6
LINC00564-201ENST00000567258 KYAT1Q16773 422 aa11.32□□□□□ -0.6
LINC00564-201ENST00000567258 UPP1Q16831 310 aa11.32□□□□□ -0.6
LINC00564-201ENST00000567258 ZPBP2Q6X784 338 aa11.32□□□□□ -0.6
LINC00564-201ENST00000567258 GPBP1Q86WP2 473 aa11.32□□□□□ -0.6
LINC00564-201ENST00000567258 MYCT1Q8N699 235 aa11.32□□□□□ -0.6
LINC00564-201ENST00000567258 LNX1Q8TBB1 728 aaPredicted RBP11.32□□□□□ -0.6
LINC00564-201ENST00000567258 NXPE3Q969Y0 559 aa11.32□□□□□ -0.6
LINC00564-201ENST00000567258 ASIC4Q96FT7 647 aa11.32□□□□□ -0.6
LINC00564-201ENST00000567258 PNMA5Q96PV4 448 aa11.32□□□□□ -0.6
LINC00564-201ENST00000567258 CCDC39Q9UFE4 941 aa11.32□□□□□ -0.6
LINC00564-201ENST00000567258 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.32□□□□□ -0.6
LINC00564-201ENST00000567258 MYH15Q9Y2K3 1946 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 H7C4K7 107 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 K7ENM7 598 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 PODXLO00592 558 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 HNRNPDLO14979 420 aaKnown RBP11.31□□□□□ -0.6
LINC00564-201ENST00000567258 C8AP07357 584 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 MAPTP10636 758 aaKnown RBP11.31□□□□□ -0.6
LINC00564-201ENST00000567258 FGFR3P22607 806 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 MARCKSP29966 332 aaPredicted RBP11.31□□□□□ -0.6
LINC00564-201ENST00000567258 AVPR2P30518 371 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 RPL9P32969 192 aaKnown RBP11.31□□□□□ -0.6
LINC00564-201ENST00000567258 OR1D2P34982 312 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 MMP16P51512 607 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 NHLH1Q02575 133 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 NAB2Q15742 525 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 UVSSAQ2YD98 709 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 TMEM119Q4V9L6 283 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 LILRA6Q6PI73 481 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 GET4Q7L5D6 327 aaPredicted RBP11.31□□□□□ -0.6
LINC00564-201ENST00000567258 HAUS6Q7Z4H7 955 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 CEP120Q8N960 986 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 KRI1Q8N9T8 703 aaKnown RBP11.31□□□□□ -0.6
LINC00564-201ENST00000567258 TMEM161BQ8NDZ6 487 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 SNX27Q96L92 541 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 CLSTN3Q9BQT9 956 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 KCNK12Q9HB15 430 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 PARVGQ9HBI0 331 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 GOLGA2P5Q9HBQ8 144 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 PTPRHQ9HD43 1115 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 FBXW11Q9UKB1 542 aa11.31□□□□□ -0.6
LINC00564-201ENST00000567258 ZFP37Q9Y6Q3 630 aaPredicted RBP11.31□□□□□ -0.6
LINC00564-201ENST00000567258 ANK1P16157 1881 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 NPHP3-ACAD11A0A0J9YXS1 232 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 PRRG1O14668 218 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 CLTAP09496 248 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 KCNE1P15382 129 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 PROZP22891 400 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 FSHRP23945 695 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 TKTP29401 623 aaKnown RBP11.3□□□□□ -0.6
LINC00564-201ENST00000567258 HOXA9P31269 272 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 MCM4P33991 863 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 NCKAP1LP55160 1127 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 PPP2R3AQ06190 1150 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 RAB33AQ14088 237 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 AXDND1Q5T1B0 1012 aaPredicted RBP11.3□□□□□ -0.6
LINC00564-201ENST00000567258 ALKAL1Q6UXT8 129 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 RTL10Q7L3V2 364 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 TAS1R3Q7RTX0 852 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 ALYREFQ86V81 257 aaKnown RBP11.3□□□□□ -0.6
LINC00564-201ENST00000567258 APPL2Q8NEU8 664 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 FLCNQ8NFG4 579 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 SLC7A14Q8TBB6 771 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 LARP4BQ92615 738 aaKnown RBP11.3□□□□□ -0.6
LINC00564-201ENST00000567258 RAD54LQ92698 747 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 ZNF707Q96C28 371 aaPredicted RBP11.3□□□□□ -0.6
LINC00564-201ENST00000567258 ZBTB45Q96K62 511 aaPredicted RBP11.3□□□□□ -0.6
LINC00564-201ENST00000567258 REEP2Q9BRK0 252 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 CXCL16Q9H2A7 254 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 PLEKHA5Q9HAU0 1116 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 CNTN3Q9P232 1028 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms