RNA–Protein interactions for RNA: ENST00000566901.5

CFDP1-207, Transcript of craniofacial development protein 1, humanhuman

TSL 1 (best)

Gene CFDP1, Length 1,167 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-207ENST00000566901 ITGA11Q9UKX5 1188 aa13.47□□□□□ -0.25
CFDP1-207ENST00000566901 PYCARDQ9ULZ3 195 aa13.47□□□□□ -0.25
CFDP1-207ENST00000566901 IPPQ9Y573 584 aa13.47□□□□□ -0.25
CFDP1-207ENST00000566901 PDCD11Q14690 1871 aaKnown RBP13.46□□□□□ -0.25
CFDP1-207ENST00000566901 TTC28Q96AY4 2481 aa13.46□□□□□ -0.25
CFDP1-207ENST00000566901 XPOTO43592 962 aaKnown RBP13.46□□□□□ -0.25
CFDP1-207ENST00000566901 PHACTR2O75167 634 aa13.46□□□□□ -0.25
CFDP1-207ENST00000566901 GFPT2O94808 682 aa13.46□□□□□ -0.25
CFDP1-207ENST00000566901 SERPING1P05155 500 aa13.46□□□□□ -0.25
CFDP1-207ENST00000566901 NFICP08651 508 aa13.46□□□□□ -0.25
CFDP1-207ENST00000566901 ZSCAN20P17040 1043 aaPredicted RBP13.46□□□□□ -0.25
CFDP1-207ENST00000566901 TBXAS1P24557 533 aaPredicted RBP13.46□□□□□ -0.25
CFDP1-207ENST00000566901 CD52P31358 61 aa13.46□□□□□ -0.25
CFDP1-207ENST00000566901 ATICP31939 592 aa13.46□□□□□ -0.25
CFDP1-207ENST00000566901 CYLC1P35663 651 aaPredicted RBP13.46□□□□□ -0.25
CFDP1-207ENST00000566901 TFAMQ00059 246 aaKnown RBP13.46□□□□□ -0.25
CFDP1-207ENST00000566901 APBA1Q02410 837 aa13.46□□□□□ -0.25
CFDP1-207ENST00000566901 RAPGEF1Q13905 1077 aa13.46□□□□□ -0.25
CFDP1-207ENST00000566901 ASIC2Q16515 512 aa13.46□□□□□ -0.25
CFDP1-207ENST00000566901 E4F1Q66K89 784 aaPredicted RBP13.46□□□□□ -0.25
CFDP1-207ENST00000566901 HGSNATQ68CP4 663 aa13.46□□□□□ -0.25
CFDP1-207ENST00000566901 JADE1Q6IE81 842 aa13.46□□□□□ -0.25
CFDP1-207ENST00000566901 SMG8Q8ND04 991 aaKnown RBP13.46□□□□□ -0.25
CFDP1-207ENST00000566901 MAFAQ8NHW3 353 aaPredicted RBP13.46□□□□□ -0.25
CFDP1-207ENST00000566901 HELQQ8TDG4 1101 aa13.46□□□□□ -0.25
CFDP1-207ENST00000566901 SHC3Q92529 594 aa13.46□□□□□ -0.25
CFDP1-207ENST00000566901 COL25A1Q9BXS0 654 aaPredicted RBP13.46□□□□□ -0.25
CFDP1-207ENST00000566901 FTHL17Q9BXU8 183 aa13.46□□□□□ -0.25
CFDP1-207ENST00000566901 FAM105AQ9NUU6 356 aa13.46□□□□□ -0.25
CFDP1-207ENST00000566901 PCDHB2Q9Y5E7 798 aa13.46□□□□□ -0.25
CFDP1-207ENST00000566901 DCDC2CA8MYV0 355 aa13.45□□□□□ -0.26
CFDP1-207ENST00000566901 ZNF500O60304 480 aaPredicted RBP13.45□□□□□ -0.26
CFDP1-207ENST00000566901 PQBP1O60828 265 aaKnown RBP13.45□□□□□ -0.26
CFDP1-207ENST00000566901 CYP3A5P20815 502 aa13.45□□□□□ -0.26
CFDP1-207ENST00000566901 SOX5P35711 763 aa13.45□□□□□ -0.26
CFDP1-207ENST00000566901 NOP14P78316 857 aaKnown RBP13.45□□□□□ -0.26
CFDP1-207ENST00000566901 NFX1Q12986 1120 aaKnown RBP13.45□□□□□ -0.26
CFDP1-207ENST00000566901 TRPC3Q13507 836 aa13.45□□□□□ -0.26
CFDP1-207ENST00000566901 MBTPS1Q14703 1052 aa13.45□□□□□ -0.26
CFDP1-207ENST00000566901 DRAP1Q14919 205 aaPredicted RBP13.45□□□□□ -0.26
CFDP1-207ENST00000566901 ZBTB6Q15916 424 aa13.45□□□□□ -0.26
CFDP1-207ENST00000566901 SGSM1Q2NKQ1 1148 aa13.45□□□□□ -0.26
CFDP1-207ENST00000566901 ARHGEF19Q8IW93 802 aa13.45□□□□□ -0.26
CFDP1-207ENST00000566901 PPM1KQ8N3J5 372 aa13.45□□□□□ -0.26
CFDP1-207ENST00000566901 C1orf127Q8N9H9 656 aa13.45□□□□□ -0.26
CFDP1-207ENST00000566901 BEST2Q8NFU1 509 aa13.45□□□□□ -0.26
CFDP1-207ENST00000566901 CXorf38Q8TB03 319 aa13.45□□□□□ -0.26
CFDP1-207ENST00000566901 RNPC3Q96LT9 517 aaKnown RBP13.45□□□□□ -0.26
CFDP1-207ENST00000566901 CDX2Q99626 313 aaPredicted RBP13.45□□□□□ -0.26
CFDP1-207ENST00000566901 GPR88Q9GZN0 384 aa13.45□□□□□ -0.26
CFDP1-207ENST00000566901 UBE2TQ9NPD8 197 aaPredicted RBP13.45□□□□□ -0.26
CFDP1-207ENST00000566901 UBN1Q9NPG3 1134 aa13.45□□□□□ -0.26
CFDP1-207ENST00000566901 AJAP1Q9UKB5 411 aaPredicted RBP13.45□□□□□ -0.26
CFDP1-207ENST00000566901 UBQLN1Q9UMX0 589 aaKnown RBP13.45□□□□□ -0.26
CFDP1-207ENST00000566901 GIT1Q9Y2X7 761 aa13.45□□□□□ -0.26
CFDP1-207ENST00000566901 ATP8B3O60423 1300 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 A0A0U1RQF3 1178 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 GOLGA6L9A6NEM1 432 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 SOWAHDA6NJG2 315 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 EIF3CLB5ME19 914 aaKnown RBP13.44□□□□□ -0.26
CFDP1-207ENST00000566901 INPPL1O15357 1258 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 ZSCAN12O43309 604 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 CLTBP09497 229 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 TLE2Q04725 743 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 CUL2Q13617 745 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 GJB7Q6PEY0 223 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 RAD9BQ6WBX8 426 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 IRF2BP2Q7Z5L9 587 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 FAM71AQ8IYT1 594 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 LRRC52Q8N7C0 313 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 MYLIPQ8WY64 445 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 APBB2Q92870 758 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 PGBD4Q96DM1 585 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 KREMEN1Q96MU8 473 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 EIF3CQ99613 913 aaKnown RBP13.44□□□□□ -0.26
CFDP1-207ENST00000566901 IFIH1Q9BYX4 1025 aaKnown RBP13.44□□□□□ -0.26
CFDP1-207ENST00000566901 NIF3L1Q9GZT8 377 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 XYLT2Q9H1B5 865 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 SPTLC3Q9NUV7 552 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 ARHGAP20Q9P2F6 1191 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 SIX4Q9UIU6 781 aa13.44□□□□□ -0.26
CFDP1-207ENST00000566901 NDUFA10O95299 355 aa13.43□□□□□ -0.26
CFDP1-207ENST00000566901 LCA5LO95447 670 aa13.43□□□□□ -0.26
CFDP1-207ENST00000566901 CXCL10P02778 98 aa13.43□□□□□ -0.26
CFDP1-207ENST00000566901 ITGA4P13612 1032 aa13.43□□□□□ -0.26
CFDP1-207ENST00000566901 FOSL2P15408 326 aa13.43□□□□□ -0.26
CFDP1-207ENST00000566901 RAG1P15918 1043 aa13.43□□□□□ -0.26
CFDP1-207ENST00000566901 YWHAEP62258 255 aaKnown RBP13.43□□□□□ -0.26
CFDP1-207ENST00000566901 RBP5P82980 135 aa13.43□□□□□ -0.26
CFDP1-207ENST00000566901 KLHL30Q0D2K2 578 aa13.43□□□□□ -0.26
CFDP1-207ENST00000566901 PDAP1Q13442 181 aaKnown RBP13.43□□□□□ -0.26
CFDP1-207ENST00000566901 ASTE1Q2TB18 679 aaPredicted RBP13.43□□□□□ -0.26
CFDP1-207ENST00000566901 ZNF699Q32M78 642 aa13.43□□□□□ -0.26
CFDP1-207ENST00000566901 RSPH1Q8WYR4 309 aa13.43□□□□□ -0.26
CFDP1-207ENST00000566901 CCDC42Q96M95 316 aa13.43□□□□□ -0.26
CFDP1-207ENST00000566901 CHP1Q99653 195 aa13.43□□□□□ -0.26
CFDP1-207ENST00000566901 NHEJ1Q9H9Q4 299 aaPredicted RBP13.43□□□□□ -0.26
CFDP1-207ENST00000566901 APOBEC3GQ9HC16 384 aaKnown RBP13.43□□□□□ -0.26
CFDP1-207ENST00000566901 RGS18Q9NS28 235 aa13.43□□□□□ -0.26
CFDP1-207ENST00000566901 SLC38A7Q9NVC3 462 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms