RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 KLC1Q07866 573 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 BIRC2Q13490 618 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 RBBP5Q15291 538 aaKnown RBP16.65■□□□□ 0.26
COMMD4-215ENST00000566843 CWF19L1Q69YN2 538 aaKnown RBP16.65■□□□□ 0.26
COMMD4-215ENST00000566843 ZNF333Q96JL9 665 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 TRABDQ9H4I3 376 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 KIAA1586Q9HCI6 787 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 SIPA1L1O43166 1804 aa16.64■□□□□ 0.25
COMMD4-215ENST00000566843 SPDYE5A6NIY4 337 aa16.64■□□□□ 0.25
COMMD4-215ENST00000566843 SIGLEC16A6NMB1 481 aa16.64■□□□□ 0.25
COMMD4-215ENST00000566843 F5H6K3 240 aa16.64■□□□□ 0.25
COMMD4-215ENST00000566843 C6orf229H3BNL8 230 aa16.64■□□□□ 0.25
COMMD4-215ENST00000566843 C2CD2LO14523 706 aa16.64■□□□□ 0.25
COMMD4-215ENST00000566843 CHMP2AO43633 222 aa16.64■□□□□ 0.25
COMMD4-215ENST00000566843 RAD21O60216 631 aa16.64■□□□□ 0.25
COMMD4-215ENST00000566843 KLRC2P26717 231 aa16.64■□□□□ 0.25
COMMD4-215ENST00000566843 PAPOLAP51003 745 aaKnown RBP16.64■□□□□ 0.25
COMMD4-215ENST00000566843 MXRA7P84157 204 aa16.64■□□□□ 0.25
COMMD4-215ENST00000566843 CLEC16AQ2KHT3 1053 aa16.64■□□□□ 0.25
COMMD4-215ENST00000566843 CRY2Q49AN0 593 aa16.64■□□□□ 0.25
COMMD4-215ENST00000566843 RBM26Q5T8P6 1007 aaKnown RBP16.64■□□□□ 0.25
COMMD4-215ENST00000566843 IRGCQ6NXR0 463 aa16.64■□□□□ 0.25
COMMD4-215ENST00000566843 CDC42EP5Q6NZY7 148 aa16.64■□□□□ 0.25
COMMD4-215ENST00000566843 XXYLT1Q8NBI6 393 aa16.64■□□□□ 0.25
COMMD4-215ENST00000566843 LRRC8CQ8TDW0 803 aa16.64■□□□□ 0.25
COMMD4-215ENST00000566843 GMCL1Q96IK5 515 aa16.64■□□□□ 0.25
COMMD4-215ENST00000566843 ACCSQ96QU6 501 aa16.64■□□□□ 0.25
COMMD4-215ENST00000566843 CBWD1Q9BRT8 395 aa16.64■□□□□ 0.25
COMMD4-215ENST00000566843 ANAPC7Q9UJX3 599 aa16.64■□□□□ 0.25
COMMD4-215ENST00000566843 TISP43B9A030 160 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 K7ENM7 598 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 CBX6O95503 412 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 SLURP2P0DP57 97 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 MARK3P27448 753 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 RASA2Q15283 850 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 NBPF20Q3BBV1 942 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 B3GNT9Q6UX72 402 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 ZNF365Q70YC5 407 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 CCDC125Q86Z20 511 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 GMCL1P1Q8NEA9 526 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 HELQQ8TDG4 1101 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 ZFAND2BQ8WV99 257 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 RBM15Q96T37 977 aaKnown RBP eCLIP16.63■□□□□ 0.25
COMMD4-215ENST00000566843 HSPBP1Q9NZL4 362 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 EXOC1LA0A1B0GW35 172 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 EIF4E1BA6NMX2 242 aaKnown RBP16.63■□□□□ 0.25
COMMD4-215ENST00000566843 VPS41P49754 854 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 RAB27AP51159 221 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 ROR2Q01974 943 aaKnown RBP16.63■□□□□ 0.25
COMMD4-215ENST00000566843 CTC1Q2NKJ3 1217 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 ZNF449Q6P9G9 518 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 PPM1KQ8N3J5 372 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 SEMA4DQ92854 862 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 FAM81BQ96LP2 452 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 TTC25Q96NG3 672 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 PAPOLBQ9NRJ5 636 aaKnown RBP16.63■□□□□ 0.25
COMMD4-215ENST00000566843 ETAA1Q9NY74 926 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 STOML1Q9UBI4 398 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 COQ4Q9Y3A0 265 aa16.63■□□□□ 0.25
COMMD4-215ENST00000566843 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.63■□□□□ 0.25
COMMD4-215ENST00000566843 ARHGEF35A5YM69 484 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 TYROBPO43914 113 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 ENTPD5O75356 428 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 PDHA1P08559 390 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 TAL1P17542 331 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-215ENST00000566843 SP100P23497 879 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-215ENST00000566843 SNRPFP62306 86 aaKnown RBP16.62■□□□□ 0.25
COMMD4-215ENST00000566843 SLC1A5Q15758 541 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 SHROOM1Q2M3G4 852 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-215ENST00000566843 TAF1BQ53T94 588 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-215ENST00000566843 C4orf50Q6ZRC1 276 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 OTOAQ7RTW8 1153 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 CERS5Q8N5B7 392 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 TEKT4Q8WW24 435 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 LTBP1Q14766 1721 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 NVLO15381 856 aaKnown RBP16.62■□□□□ 0.25
COMMD4-215ENST00000566843 GAS7O60861 476 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 SMIM24O75264 130 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 UPP2O95045 317 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 GNAT1P11488 350 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 VHLP40337 213 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 GPC3P51654 580 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 PKN2Q16513 984 aaKnown RBP16.62■□□□□ 0.25
COMMD4-215ENST00000566843 TMEM154Q6P9G4 183 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 NLRP9Q7RTR0 991 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 GALNT15Q8N3T1 639 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 ZSWIM2Q8NEG5 633 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 KIFAP3Q92845 792 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 IFT43Q96FT9 208 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 SMC6Q96SB8 1091 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 WDR11Q9BZH6 1224 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 UNC45AQ9H3U1 944 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 PPCSQ9HAB8 311 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 SSU72Q9NP77 194 aaKnown RBP16.62■□□□□ 0.25
COMMD4-215ENST00000566843 ZFP69BQ9UJL9 534 aa16.62■□□□□ 0.25
COMMD4-215ENST00000566843 GSTTP1A0A1W2PQM5 241 aa16.61■□□□□ 0.25
COMMD4-215ENST00000566843 RALAP11233 206 aa16.61■□□□□ 0.25
COMMD4-215ENST00000566843 RPA3P35244 121 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-215ENST00000566843 GCLCP48506 637 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-215ENST00000566843 OCRLQ01968 901 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms