RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 TMEM253P0C7T8 217 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 ZSCAN20P17040 1043 aaPredicted RBP12.16□□□□□ -0.46
LINC00562-201ENST00000566385 AKAP5P24588 427 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 RAP1GAPP47736 663 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 CDH8P55286 799 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 HSP90AA2PQ14568 343 aaPredicted RBP12.16□□□□□ -0.46
LINC00562-201ENST00000566385 SURF1Q15526 300 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 SGSM1Q2NKQ1 1148 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 CCSAPQ6IQ19 270 aaPredicted RBP12.16□□□□□ -0.46
LINC00562-201ENST00000566385 CREG2Q8IUH2 290 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 TXLNBQ8N3L3 684 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 IMPG2Q9BZV3 1241 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 RNF39Q9H2S5 420 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 PIN4Q9Y237 131 aaKnown RBP12.16□□□□□ -0.46
LINC00562-201ENST00000566385 MROH7Q68CQ1 1323 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 EFCAB8A8MWE9 144 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 TNNC2P02585 160 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 ASPAP45381 313 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 ZNF699Q32M78 642 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 WDR72Q3MJ13 1102 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 GLRA4Q5JXX5 417 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 TEX35Q5T0J7 233 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 MEI1Q5TIA1 1274 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 LLGL2Q6P1M3 1020 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 SLC27A1Q6PCB7 646 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 RSRC2Q7L4I2 434 aaKnown RBP12.16□□□□□ -0.46
LINC00562-201ENST00000566385 PASD1Q8IV76 773 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 UBR7Q8N806 425 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 NOA1Q8NC60 698 aaKnown RBP12.16□□□□□ -0.46
LINC00562-201ENST00000566385 RBBP8NLQ8NC74 664 aaPredicted RBP12.16□□□□□ -0.46
LINC00562-201ENST00000566385 CPA5Q8WXQ8 436 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 CTNNBL1Q8WYA6 563 aaPredicted RBP12.16□□□□□ -0.46
LINC00562-201ENST00000566385 ANKRD7Q92527 254 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 CYFIP2Q96F07 1278 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 OSBPL9Q96SU4 736 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 APOL6Q9BWW8 343 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 INTUQ9ULD6 942 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 PCDHB2Q9Y5E7 798 aa12.16□□□□□ -0.46
LINC00562-201ENST00000566385 RTN2O75298 545 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 CTSHP09668 335 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 GRM5P41594 1212 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 PHLDB2Q86SQ0 1253 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 KLHDC9Q8NEP7 349 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 UBXN4Q92575 508 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 MS4A14Q96JA4 679 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 ZSWIM1Q9BR11 485 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 ASB7Q9H672 318 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 SPC25Q9HBM1 224 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 CISHQ9NSE2 258 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 CNTN6Q9UQ52 1028 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 SCN1AP35498 2009 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 THSD7BQ9C0I4 1608 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 BUB1BO60566 1050 aaPredicted RBP12.15□□□□□ -0.46
LINC00562-201ENST00000566385 GNAT1P11488 350 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 UNGP13051 313 aaPredicted RBP12.15□□□□□ -0.46
LINC00562-201ENST00000566385 TBXAS1P24557 533 aaPredicted RBP12.15□□□□□ -0.46
LINC00562-201ENST00000566385 GNA15P30679 374 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 POLR2BP30876 1174 aaKnown RBP12.15□□□□□ -0.46
LINC00562-201ENST00000566385 CRYBB1P53674 252 aaPredicted RBP12.15□□□□□ -0.46
LINC00562-201ENST00000566385 CDC42EP1Q00587 391 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 ORC1Q13415 861 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 WHAMMP3Q1A5X7 153 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 NOTUMQ6P988 496 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 RFFLQ8WZ73 363 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 CFHR5Q9BXR6 569 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 NIF3L1Q9GZT8 377 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 SDCBP2Q9H190 292 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 KLK14Q9P0G3 267 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 TSKSQ9UJT2 592 aa12.15□□□□□ -0.46
LINC00562-201ENST00000566385 NOC2LQ9Y3T9 749 aaKnown RBP12.15□□□□□ -0.46
LINC00562-201ENST00000566385 A0A0A6YYK5 440 aaPredicted RBP12.14□□□□□ -0.47
LINC00562-201ENST00000566385 PPEF2O14830 753 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 GZMAP12544 262 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 TMEM132DQ14C87 1099 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 UBXN11Q5T124 520 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 MAP3K21Q5TCX8 1036 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 DAAM2Q86T65 1068 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 FAM228AQ86W67 206 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 C18orf25Q96B23 403 aaPredicted RBP12.14□□□□□ -0.47
LINC00562-201ENST00000566385 KIF12Q96FN5 646 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 CELF4Q9BZC1 486 aaKnown RBP12.14□□□□□ -0.47
LINC00562-201ENST00000566385 NCANO14594 1321 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 CHRNA1P02708 482 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 ZNF132P52740 706 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 NKX3-2P78367 333 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 CLEC16AQ2KHT3 1053 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 CPNE8Q86YQ8 564 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 CEP112Q8N8E3 955 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 RAET1EQ8TD07 263 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 ZNF296Q8WUU4 475 aaPredicted RBP12.14□□□□□ -0.47
LINC00562-201ENST00000566385 ZNF606Q8WXB4 792 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 BTBD6Q96KE9 485 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 FAM81BQ96LP2 452 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 TRIM6Q9C030 488 aaPredicted RBP12.14□□□□□ -0.47
LINC00562-201ENST00000566385 HMGXB4Q9UGU5 601 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 AGAP1Q9UPQ3 857 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 CDY2AQ9Y6F7 541 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 ATP8B3O60423 1300 aa12.14□□□□□ -0.47
LINC00562-201ENST00000566385 MEIS3P2A8K0S8 358 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 KPNA6O60684 536 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms