RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 CNTNAP2Q9UHC6 1331 aa14.26□□□□□ -0.13
LINC00563-201ENST00000566370 INO80B-WBP1J3KQ70 363 aa14.25□□□□□ -0.13
LINC00563-201ENST00000566370 NDC80O14777 642 aa14.25□□□□□ -0.13
LINC00563-201ENST00000566370 STRNO43815 780 aa14.25□□□□□ -0.13
LINC00563-201ENST00000566370 PROSCO94903 275 aa14.25□□□□□ -0.13
LINC00563-201ENST00000566370 ECEL1O95672 775 aa14.25□□□□□ -0.13
LINC00563-201ENST00000566370 GAS8O95995 478 aa14.25□□□□□ -0.13
LINC00563-201ENST00000566370 CETPP11597 493 aa14.25□□□□□ -0.13
LINC00563-201ENST00000566370 GCLCP48506 637 aaPredicted RBP14.25□□□□□ -0.13
LINC00563-201ENST00000566370 SLMAPQ14BN4 828 aa14.25□□□□□ -0.13
LINC00563-201ENST00000566370 CYP1B1Q16678 543 aa14.25□□□□□ -0.13
LINC00563-201ENST00000566370 CEP85LQ5SZL2 805 aa14.25□□□□□ -0.13
LINC00563-201ENST00000566370 CCDC137Q6PK04 289 aaKnown RBP14.25□□□□□ -0.13
LINC00563-201ENST00000566370 TSHZ1Q6ZSZ6 1077 aa14.25□□□□□ -0.13
LINC00563-201ENST00000566370 CEP128Q6ZU80 1094 aa14.25□□□□□ -0.13
LINC00563-201ENST00000566370 RHOT1Q8IXI2 618 aa14.25□□□□□ -0.13
LINC00563-201ENST00000566370 C12orf50Q8NA57 414 aaPredicted RBP14.25□□□□□ -0.13
LINC00563-201ENST00000566370 TMEM35BQ8NCS4 154 aa14.25□□□□□ -0.13
LINC00563-201ENST00000566370 FAM212AQ96EL1 285 aa14.25□□□□□ -0.13
LINC00563-201ENST00000566370 ATP6V1G3Q96LB4 118 aa14.25□□□□□ -0.13
LINC00563-201ENST00000566370 NFKBIZQ9BYH8 718 aa14.25□□□□□ -0.13
LINC00563-201ENST00000566370 INO80BQ9C086 356 aaPredicted RBP14.25□□□□□ -0.13
LINC00563-201ENST00000566370 RPF1Q9H9Y2 349 aaKnown RBP14.25□□□□□ -0.13
LINC00563-201ENST00000566370 IP6K2Q9UHH9 426 aa14.25□□□□□ -0.13
LINC00563-201ENST00000566370 PRDM4Q9UKN5 801 aa14.25□□□□□ -0.13
LINC00563-201ENST00000566370 ASS1P00966 412 aaKnown RBP14.24□□□□□ -0.13
LINC00563-201ENST00000566370 P4HA1P13674 534 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 ACO1P21399 889 aaKnown RBP14.24□□□□□ -0.13
LINC00563-201ENST00000566370 POLR2BP30876 1174 aaKnown RBP14.24□□□□□ -0.13
LINC00563-201ENST00000566370 HSD17B3P37058 310 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 COILP38432 576 aaPredicted RBP14.24□□□□□ -0.13
LINC00563-201ENST00000566370 NOMO3P69849 1222 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 SKOR1P84550 965 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 PPP1R7Q15435 360 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 ZNF699Q32M78 642 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 SGO2Q562F6 1265 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 AGBL2Q5U5Z8 902 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 DUPD1Q68J44 220 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 EFCAB12Q6NXP0 572 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 CCDC62Q6P9F0 684 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 MON1BQ7L1V2 547 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 ADAT2Q7Z6V5 191 aaKnown RBP14.24□□□□□ -0.13
LINC00563-201ENST00000566370 FBXO16Q8IX29 292 aaPredicted RBP14.24□□□□□ -0.13
LINC00563-201ENST00000566370 TTC39CQ8N584 583 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 BBOF1Q8ND07 529 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 RIN2Q8WYP3 895 aaPredicted RBP14.24□□□□□ -0.13
LINC00563-201ENST00000566370 KRT35Q92764 455 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 FAM107BQ9H098 131 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 STMN4Q9H169 189 aaPredicted RBP14.24□□□□□ -0.13
LINC00563-201ENST00000566370 CPSF3Q9UKF6 684 aaKnown RBP14.24□□□□□ -0.13
LINC00563-201ENST00000566370 STRIP2Q9ULQ0 834 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 TNFSF13BQ9Y275 285 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 SCN4AP35499 1836 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 FSCN2O14926 492 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 ZEB2O60315 1214 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 GRIN3BO60391 1043 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 ARIH2O95376 493 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 GTF2A2P52657 109 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 CAV1Q03135 178 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 LMNB2Q03252 620 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 DHX9Q08211 1270 aaKnown RBP14.24□□□□□ -0.13
LINC00563-201ENST00000566370 HSDL1Q3SXM5 330 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 EAPPQ56P03 285 aaPredicted RBP14.24□□□□□ -0.13
LINC00563-201ENST00000566370 KDM7AQ6ZMT4 941 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 ARMCX2Q7L311 632 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 TMC3Q7Z5M5 1100 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 ZNF467Q7Z7K2 595 aaPredicted RBP14.24□□□□□ -0.13
LINC00563-201ENST00000566370 CCDC50Q8IVM0 306 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 LRRC71Q8N4P6 559 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 CPA5Q8WXQ8 436 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 UPF1Q92900 1129 aaKnown RBP eCLIP14.24□□□□□ -0.13
LINC00563-201ENST00000566370 CYFIP2Q96F07 1278 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 RBM41Q96IZ5 413 aaKnown RBP14.24□□□□□ -0.13
LINC00563-201ENST00000566370 NLRP4Q96MN2 994 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 C11orf70Q9BRQ4 267 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 TRIM51Q9BSJ1 452 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 CELF4Q9BZC1 486 aaKnown RBP14.24□□□□□ -0.13
LINC00563-201ENST00000566370 TRIM31Q9BZY9 425 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 HAPLN2Q9GZV7 340 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 FZD8Q9H461 694 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 ACP6Q9NPH0 428 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 SLC5A4Q9NY91 659 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 NUB1Q9Y5A7 615 aa14.24□□□□□ -0.13
LINC00563-201ENST00000566370 ZNFX1Q9P2E3 1918 aaKnown RBP14.23□□□□□ -0.13
LINC00563-201ENST00000566370 B4GALT4O60513 344 aa14.23□□□□□ -0.13
LINC00563-201ENST00000566370 SHOX2O60902 331 aaPredicted RBP14.23□□□□□ -0.13
LINC00563-201ENST00000566370 PPFIA2O75334 1257 aa14.23□□□□□ -0.13
LINC00563-201ENST00000566370 MCF2P10911 925 aa14.23□□□□□ -0.13
LINC00563-201ENST00000566370 PYGMP11217 842 aa14.23□□□□□ -0.13
LINC00563-201ENST00000566370 NR1D1P20393 614 aa14.23□□□□□ -0.13
LINC00563-201ENST00000566370 RRM1P23921 792 aa14.23□□□□□ -0.13
LINC00563-201ENST00000566370 RDXP35241 583 aaKnown RBP14.23□□□□□ -0.13
LINC00563-201ENST00000566370 TFAMQ00059 246 aaKnown RBP14.23□□□□□ -0.13
LINC00563-201ENST00000566370 DENND2CQ68D51 928 aa14.23□□□□□ -0.13
LINC00563-201ENST00000566370 SPOPLQ6IQ16 392 aa14.23□□□□□ -0.13
LINC00563-201ENST00000566370 GPAT2Q6NUI2 795 aa14.23□□□□□ -0.13
LINC00563-201ENST00000566370 DDX42Q86XP3 938 aaKnown RBP eCLIP14.23□□□□□ -0.13
LINC00563-201ENST00000566370 PRELID2Q8N945 189 aa14.23□□□□□ -0.13
LINC00563-201ENST00000566370 OR5B17Q8NGF7 314 aa14.23□□□□□ -0.13
LINC00563-201ENST00000566370 SLCO2A1Q92959 643 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms