RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 GPR162Q16538 588 aa3.31□□□□□ -1.88
SMG1-212ENST00000566328 MUM1Q2TAK8 710 aa3.31□□□□□ -1.88
SMG1-212ENST00000566328 NOMO2Q5JPE7 1267 aa3.31□□□□□ -1.88
SMG1-212ENST00000566328 SUMO4Q6EEV6 95 aa3.31□□□□□ -1.88
SMG1-212ENST00000566328 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.31□□□□□ -1.88
SMG1-212ENST00000566328 VGLL2Q8N8G2 317 aa3.31□□□□□ -1.88
SMG1-212ENST00000566328 TOR1AIP2Q8NFQ8 470 aa3.31□□□□□ -1.88
SMG1-212ENST00000566328 TBC1D15Q8TC07 691 aa3.31□□□□□ -1.88
SMG1-212ENST00000566328 TSPEARQ8WU66 669 aa3.31□□□□□ -1.88
SMG1-212ENST00000566328 LEO1Q8WVC0 666 aaPredicted RBP3.31□□□□□ -1.88
SMG1-212ENST00000566328 HOXB13Q92826 284 aaPredicted RBP3.31□□□□□ -1.88
SMG1-212ENST00000566328 MFSD3Q96ES6 412 aa3.31□□□□□ -1.88
SMG1-212ENST00000566328 NRIP3Q9NQ35 241 aa3.31□□□□□ -1.88
SMG1-212ENST00000566328 HSFX1Q9UBD0 423 aa3.31□□□□□ -1.88
SMG1-212ENST00000566328 CDHR4A6H8M9 788 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 LINC01548A6NM66 108 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 FAM171A2A8MVW0 826 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 WNT10BO00744 389 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 GPR32O75388 356 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 PRR35P0CG20 571 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 CBSLP0DN79 551 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 FPR1P21462 350 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 KELP23276 732 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 CBSP35520 551 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 SSBP2P81877 361 aaPredicted RBP3.3□□□□□ -1.88
SMG1-212ENST00000566328 ZNF844Q08AG5 666 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 MALLQ13021 153 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 DHCR24Q15392 516 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 DACT2Q5SW24 774 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 C11orf87Q6NUJ2 197 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 Q8NA96 180 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 RPL36ALQ969Q0 106 aaKnown RBP3.3□□□□□ -1.88
SMG1-212ENST00000566328 TMEM125Q96AQ2 219 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 RNPC3Q96LT9 517 aaKnown RBP3.3□□□□□ -1.88
SMG1-212ENST00000566328 MYOCQ99972 504 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 LDAHQ9H6V9 325 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 IFT22Q9H7X7 185 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 MANSC1Q9H8J5 431 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 PADI4Q9UM07 663 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 ACTL7AQ9Y615 435 aa3.3□□□□□ -1.88
SMG1-212ENST00000566328 GOLGA8AA7E2F4 631 aa3.29□□□□□ -1.88
SMG1-212ENST00000566328 KIAA0391O15091 583 aaKnown RBP3.29□□□□□ -1.88
SMG1-212ENST00000566328 GSPT1P15170 499 aaKnown RBP3.29□□□□□ -1.88
SMG1-212ENST00000566328 KCNA2P16389 499 aa3.29□□□□□ -1.88
SMG1-212ENST00000566328 BPIP17213 487 aa3.29□□□□□ -1.88
SMG1-212ENST00000566328 POU3F3P20264 500 aaPredicted RBP3.29□□□□□ -1.88
SMG1-212ENST00000566328 CERS1P27544 350 aa3.29□□□□□ -1.88
SMG1-212ENST00000566328 MCAMP43121 646 aa3.29□□□□□ -1.88
SMG1-212ENST00000566328 CCT4P50991 539 aaKnown RBP3.29□□□□□ -1.88
SMG1-212ENST00000566328 SLC5A3P53794 718 aa3.29□□□□□ -1.88
SMG1-212ENST00000566328 NXPH1P58417 271 aa3.29□□□□□ -1.88
SMG1-212ENST00000566328 KRTAP10-6P60371 365 aaPredicted RBP3.29□□□□□ -1.88
SMG1-212ENST00000566328 SLFN5Q08AF3 891 aa3.29□□□□□ -1.88
SMG1-212ENST00000566328 MGAT2Q10469 447 aa3.29□□□□□ -1.88
SMG1-212ENST00000566328 DYRK1AQ13627 763 aa3.29□□□□□ -1.88
SMG1-212ENST00000566328 TKFCQ3LXA3 575 aa3.29□□□□□ -1.88
SMG1-212ENST00000566328 AMIGO2Q86SJ2 522 aa3.29□□□□□ -1.88
SMG1-212ENST00000566328 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.29□□□□□ -1.88
SMG1-212ENST00000566328 SLC30A5Q8TAD4 765 aa3.29□□□□□ -1.88
SMG1-212ENST00000566328 SREK1Q8WXA9 508 aaKnown RBP3.29□□□□□ -1.88
SMG1-212ENST00000566328 TTC1Q99614 292 aa3.29□□□□□ -1.88
SMG1-212ENST00000566328 QRSL1Q9H0R6 528 aaKnown RBP3.29□□□□□ -1.88
SMG1-212ENST00000566328 BHMT2Q9H2M3 363 aa3.29□□□□□ -1.88
SMG1-212ENST00000566328 FANCLQ9NW38 375 aa3.29□□□□□ -1.88
SMG1-212ENST00000566328 MAPRE3Q9UPY8 281 aa3.29□□□□□ -1.88
SMG1-212ENST00000566328 RUVBL1Q9Y265 456 aaKnown RBP3.29□□□□□ -1.88
SMG1-212ENST00000566328 TBC1D30Q9Y2I9 924 aa3.29□□□□□ -1.88
SMG1-212ENST00000566328 ZNF521Q96K83 1311 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 TCRBV7S2A1N4TA0A589 114 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 LINC00473A8K010 186 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 ADM5C9JUS6 153 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 CDC45O75419 566 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 HAUS5O94927 633 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 TTLL1O95922 423 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 CHRM2P08172 466 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 FCER1AP12319 257 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 GATA3P23771 443 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 PCSK1P29120 753 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 ITIH3Q06033 890 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 PPP3CAQ08209 521 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 FAPQ12884 760 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 MTM1Q13496 603 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 CCDC144BQ3MJ40 725 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 PREPLQ4J6C6 727 aaPredicted RBP3.28□□□□□ -1.88
SMG1-212ENST00000566328 MORN5Q5VZ52 161 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 ZNF626Q68DY1 528 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 SLC9A4Q6AI14 798 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 NPM2Q86SE8 214 aaKnown RBP3.28□□□□□ -1.88
SMG1-212ENST00000566328 B3GALNT2Q8NCR0 500 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 CLRN3Q8NCR9 226 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 CCHCR1Q8TD31 782 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 LPIN2Q92539 896 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 SNX19Q92543 992 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 DMRT3Q9NQL9 472 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 ST3GAL5Q9UNP4 418 aa3.28□□□□□ -1.88
SMG1-212ENST00000566328 APOBEC2Q9Y235 224 aaKnown RBP3.28□□□□□ -1.88
SMG1-212ENST00000566328 TRIM38O00635 465 aa3.27□□□□□ -1.89
SMG1-212ENST00000566328 MOSPD3O75425 235 aa3.27□□□□□ -1.89
SMG1-212ENST00000566328 URI1O94763 535 aaPredicted RBP3.27□□□□□ -1.89
SMG1-212ENST00000566328 CD1AP06126 327 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms