RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 SAGE1Q9NXZ1 904 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 GTF2IRD1Q9UHL9 959 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 SNX12Q9UMY4 172 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 HYOU1Q9Y4L1 999 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 MYH10P35580 1976 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 GRXCR2A6NFK2 248 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 LACTBL1A8MY62 500 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 GPR37O15354 613 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 CYP26A1O43174 497 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 AOC2O75106 756 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 MOCS3O95396 460 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 SGPL1O95470 568 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 TBC1D8O95759 1140 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 CYP1A1P04798 512 aaPredicted RBP9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 ATP1A1P05023 1023 aaKnown RBP9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 TUBBP07437 444 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 C6orf222P0C671 652 aaPredicted RBP9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 MYBL1P10243 752 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 HARSP12081 509 aaKnown RBP9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 BEX3Q00994 111 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 TRPC3Q13507 836 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 HIC1Q14526 733 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 SNX17Q15036 470 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 SLC10A6Q3KNW5 377 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 XKR4Q5GH76 650 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 GNASQ5JWF2 1037 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 MEI1Q5TIA1 1274 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 LMBRD2Q68DH5 695 aaPredicted RBP9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 RUFY4Q6ZNE9 571 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 CATSPER4Q7RTX7 472 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 RSPH3Q86UC2 560 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 PLPP6Q8IY26 295 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 RPUSD2Q8IZ73 545 aaKnown RBP9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 CEP120Q8N960 986 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 PCSK9Q8NBP7 692 aaKnown RBP9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 SLC20A1Q8WUM9 679 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 RABGGTAQ92696 567 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 LENG1Q96BZ8 264 aaPredicted RBP9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 TRIM11Q96F44 468 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 VCPIP1Q96JH7 1222 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 SCLT1Q96NL6 688 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 CARD6Q9BX69 1037 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 TLR10Q9BXR5 811 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 PACSIN1Q9BY11 444 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 SEZ6LQ9BYH1 1024 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 BCO2Q9BYV7 579 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 MTMR12Q9C0I1 747 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 CYP3A43Q9HB55 503 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 AVENQ9NQS1 362 aaPredicted RBP9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 HDAC6Q9UBN7 1215 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 GTF3C4Q9UKN8 822 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 ITGA11Q9UKX5 1188 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 TFR2Q9UP52 801 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 NUB1Q9Y5A7 615 aa9.5□□□□□ -0.89
LSM3P5-201ENST00000566307 CITO14578 2027 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 GRID2IPA4D2P6 1211 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 MEFVO15553 781 aaPredicted RBP9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 TREHO43280 583 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 CAND2O75155 1236 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 LSM8O95777 96 aaKnown RBP9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 CST3P01034 146 aaPredicted RBP9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 CYP1A2P05177 515 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 CXCL8P10145 99 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 UNGP13051 313 aaPredicted RBP9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 CHMP4BP1P59074 171 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 MYL6P60660 151 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 GPC5P78333 572 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 MRPS6P82932 125 aaKnown RBP9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 CENPCQ03188 943 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 ZBTB6Q15916 424 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 CLEC16AQ2KHT3 1053 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 KIZQ2M2Z5 673 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 SEZ6Q53EL9 994 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 ACAD10Q6JQN1 1059 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 C11orf63Q6NUN7 778 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 ALKAL1Q6UXT8 129 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 MTERF4Q7Z6M4 381 aaKnown RBP9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 SERINC5Q86VE9 423 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 SLC47A2Q86VL8 602 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 C1orf127Q8N9H9 656 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 TPCN2Q8NHX9 752 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 UBXN4Q92575 508 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 GOLGA1Q92805 767 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 SNX27Q96L92 541 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 PCDHB18PQ96TA0 734 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 TSEN34Q9BSV6 310 aaKnown RBP9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 PI4K2AQ9BTU6 479 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 CELF4Q9BZC1 486 aaKnown RBP9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 ZMYND15Q9H091 742 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 ABCB6Q9NP58 842 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 XPNPEP3Q9NQH7 507 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 CHST12Q9NRB3 414 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 RNF186Q9NXI6 227 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 CNTN3Q9P232 1028 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 UVRAGQ9P2Y5 699 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 LCMT1Q9UIC8 334 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 SIX4Q9UIU6 781 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 PCDHGC3Q9UN70 934 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 TRPV2Q9Y5S1 764 aa9.49□□□□□ -0.89
LSM3P5-201ENST00000566307 SQORQ9Y6N5 450 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms