RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 RBP5P82980 135 aa20.15■□□□□ 0.82
COMMD4-213ENST00000565834 TMEM130Q8N3G9 435 aa20.15■□□□□ 0.82
COMMD4-213ENST00000565834 LINC01599Q8WXQ3 324 aa20.15■□□□□ 0.82
COMMD4-213ENST00000565834 C18orf25Q96B23 403 aaPredicted RBP20.15■□□□□ 0.82
COMMD4-213ENST00000565834 GAD1Q99259 594 aa20.15■□□□□ 0.82
COMMD4-213ENST00000565834 XYLT2Q9H1B5 865 aa20.15■□□□□ 0.82
COMMD4-213ENST00000565834 RSAD1Q9HA92 442 aa20.15■□□□□ 0.82
COMMD4-213ENST00000565834 UBN1Q9NPG3 1134 aa20.15■□□□□ 0.82
COMMD4-213ENST00000565834 RNF19AQ9NV58 838 aa20.15■□□□□ 0.82
COMMD4-213ENST00000565834 AGAP1Q9UPQ3 857 aa20.15■□□□□ 0.82
COMMD4-213ENST00000565834 TDRD15B5MCY1 1934 aaKnown RBP20.15■□□□□ 0.82
COMMD4-213ENST00000565834 FOXN3O00409 490 aaPredicted RBP20.14■□□□□ 0.81
COMMD4-213ENST00000565834 PTGESO14684 152 aa20.14■□□□□ 0.81
COMMD4-213ENST00000565834 GFPT2O94808 682 aa20.14■□□□□ 0.81
COMMD4-213ENST00000565834 CXCL10P02778 98 aa20.14■□□□□ 0.81
COMMD4-213ENST00000565834 SERPING1P05155 500 aa20.14■□□□□ 0.81
COMMD4-213ENST00000565834 PNMA6AP0CW24 399 aaPredicted RBP20.14■□□□□ 0.81
COMMD4-213ENST00000565834 EN2P19622 333 aaPredicted RBP20.14■□□□□ 0.81
COMMD4-213ENST00000565834 ATICP31939 592 aa20.14■□□□□ 0.81
COMMD4-213ENST00000565834 KCNJ6P48051 423 aa20.14■□□□□ 0.81
COMMD4-213ENST00000565834 CUL2Q13617 745 aa20.14■□□□□ 0.81
COMMD4-213ENST00000565834 TDRD12Q587J7 1177 aaKnown RBP20.14■□□□□ 0.81
COMMD4-213ENST00000565834 ZNF598Q86UK7 904 aaKnown RBP20.14■□□□□ 0.81
COMMD4-213ENST00000565834 SHC3Q92529 594 aa20.14■□□□□ 0.81
COMMD4-213ENST00000565834 NIF3L1Q9GZT8 377 aa20.14■□□□□ 0.81
COMMD4-213ENST00000565834 ARHGAP20Q9P2F6 1191 aa20.14■□□□□ 0.81
COMMD4-213ENST00000565834 SCN1AP35498 2009 aa20.14■□□□□ 0.81
COMMD4-213ENST00000565834 ARL5CA6NH57 179 aa20.13■□□□□ 0.81
COMMD4-213ENST00000565834 CCDC172P0C7W6 258 aa20.13■□□□□ 0.81
COMMD4-213ENST00000565834 CYP3A5P20815 502 aa20.13■□□□□ 0.81
COMMD4-213ENST00000565834 KLHL30Q0D2K2 578 aa20.13■□□□□ 0.81
COMMD4-213ENST00000565834 MTF1Q14872 753 aa20.13■□□□□ 0.81
COMMD4-213ENST00000565834 HGSNATQ68CP4 663 aa20.13■□□□□ 0.81
COMMD4-213ENST00000565834 RAD9BQ6WBX8 426 aa20.13■□□□□ 0.81
COMMD4-213ENST00000565834 IRF2BP2Q7Z5L9 587 aa20.13■□□□□ 0.81
COMMD4-213ENST00000565834 KIAA1524Q8TCG1 905 aa20.13■□□□□ 0.81
COMMD4-213ENST00000565834 PPP1R10Q96QC0 940 aaKnown RBP20.13■□□□□ 0.81
COMMD4-213ENST00000565834 ARID3AQ99856 593 aa20.13■□□□□ 0.81
COMMD4-213ENST00000565834 NHEJ1Q9H9Q4 299 aaPredicted RBP20.13■□□□□ 0.81
COMMD4-213ENST00000565834 SLC38A7Q9NVC3 462 aa20.13■□□□□ 0.81
COMMD4-213ENST00000565834 EVI5O60447 810 aa20.13■□□□□ 0.81
COMMD4-213ENST00000565834 EOMESO95936 686 aa20.13■□□□□ 0.81
COMMD4-213ENST00000565834 PLEKP08567 350 aaPredicted RBP20.13■□□□□ 0.81
COMMD4-213ENST00000565834 FAM189BP81408 668 aa20.13■□□□□ 0.81
COMMD4-213ENST00000565834 ZNF667Q5HYK9 610 aa20.13■□□□□ 0.81
COMMD4-213ENST00000565834 JAKMIP2Q96AA8 810 aa20.13■□□□□ 0.81
COMMD4-213ENST00000565834 HPDLQ96IR7 371 aa20.13■□□□□ 0.81
COMMD4-213ENST00000565834 VRTNQ9H8Y1 702 aa20.13■□□□□ 0.81
COMMD4-213ENST00000565834 BZW2Q9Y6E2 419 aaKnown RBP20.13■□□□□ 0.81
COMMD4-213ENST00000565834 MICAL3Q7RTP6 2002 aa20.12■□□□□ 0.81
COMMD4-213ENST00000565834 ESPNB1AK53 854 aa20.12■□□□□ 0.81
COMMD4-213ENST00000565834 THP07101 528 aa20.12■□□□□ 0.81
COMMD4-213ENST00000565834 CYLC1P35663 651 aaPredicted RBP20.12■□□□□ 0.81
COMMD4-213ENST00000565834 EIF4A3P38919 411 aaKnown RBP20.12■□□□□ 0.81
COMMD4-213ENST00000565834 USP8P40818 1118 aa20.12■□□□□ 0.81
COMMD4-213ENST00000565834 PRKCIP41743 596 aa20.12■□□□□ 0.81
COMMD4-213ENST00000565834 MYO1EQ12965 1108 aa20.12■□□□□ 0.81
COMMD4-213ENST00000565834 DEFB128Q7Z7B8 93 aa20.12■□□□□ 0.81
COMMD4-213ENST00000565834 UBE2Q1Q7Z7E8 422 aa20.12■□□□□ 0.81
COMMD4-213ENST00000565834 FAM71AQ8IYT1 594 aa20.12■□□□□ 0.81
COMMD4-213ENST00000565834 CCDC170Q8IYT3 715 aa20.12■□□□□ 0.81
COMMD4-213ENST00000565834 GSTCDQ8NEC7 633 aa20.12■□□□□ 0.81
COMMD4-213ENST00000565834 CCDC42Q96M95 316 aa20.12■□□□□ 0.81
COMMD4-213ENST00000565834 DEF6Q9H4E7 631 aa20.12■□□□□ 0.81
COMMD4-213ENST00000565834 PRDM5Q9NQX1 630 aaPredicted RBP20.12■□□□□ 0.81
COMMD4-213ENST00000565834 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.12■□□□□ 0.81
COMMD4-213ENST00000565834 SSU72P8A0A1W2PR75 194 aa20.11■□□□□ 0.81
COMMD4-213ENST00000565834 ENPP3O14638 875 aa20.11■□□□□ 0.81
COMMD4-213ENST00000565834 STAU1O95793 577 aaKnown RBP20.11■□□□□ 0.81
COMMD4-213ENST00000565834 RFC2P35250 354 aa20.11■□□□□ 0.81
COMMD4-213ENST00000565834 SCNN1GP51170 649 aa20.11■□□□□ 0.81
COMMD4-213ENST00000565834 SOX4Q06945 474 aaPredicted RBP20.11■□□□□ 0.81
COMMD4-213ENST00000565834 MAPK8IP2Q13387 824 aaPredicted RBP20.11■□□□□ 0.81
COMMD4-213ENST00000565834 WDR72Q3MJ13 1102 aa20.11■□□□□ 0.81
COMMD4-213ENST00000565834 C9orf57Q5W0N0 161 aa20.11■□□□□ 0.81
COMMD4-213ENST00000565834 LRRC52Q8N7C0 313 aa20.11■□□□□ 0.81
COMMD4-213ENST00000565834 FAXDC2Q96IV6 333 aa20.11■□□□□ 0.81
COMMD4-213ENST00000565834 HAUS4Q9H6D7 363 aa20.11■□□□□ 0.81
COMMD4-213ENST00000565834 NXF1Q9UBU9 619 aaKnown RBP20.11■□□□□ 0.81
COMMD4-213ENST00000565834 ANO9A1A5B4 782 aa20.1■□□□□ 0.81
COMMD4-213ENST00000565834 KIAA0355O15063 1070 aa20.1■□□□□ 0.81
COMMD4-213ENST00000565834 KRT5P13647 590 aa20.1■□□□□ 0.81
COMMD4-213ENST00000565834 P4HA1P13674 534 aa20.1■□□□□ 0.81
COMMD4-213ENST00000565834 SCARA5Q6ZMJ2 495 aa20.1■□□□□ 0.81
COMMD4-213ENST00000565834 TOGARAM2Q6ZUX3 1019 aa20.1■□□□□ 0.81
COMMD4-213ENST00000565834 EPN1Q9Y6I3 576 aaPredicted RBP20.1■□□□□ 0.81
COMMD4-213ENST00000565834 TTC3P53804 2025 aa20.1■□□□□ 0.81
COMMD4-213ENST00000565834 ALPK3Q96L96 1907 aa20.1■□□□□ 0.81
COMMD4-213ENST00000565834 OFD1O75665 1012 aa20.1■□□□□ 0.81
COMMD4-213ENST00000565834 NDUFA10O95299 355 aa20.1■□□□□ 0.81
COMMD4-213ENST00000565834 TIMP1P01033 207 aa20.1■□□□□ 0.81
COMMD4-213ENST00000565834 ASPAP45381 313 aa20.1■□□□□ 0.81
COMMD4-213ENST00000565834 AFF1P51825 1210 aaKnown RBP20.1■□□□□ 0.81
COMMD4-213ENST00000565834 TCTN1Q2MV58 587 aa20.1■□□□□ 0.81
COMMD4-213ENST00000565834 GLB1LQ6UWU2 654 aa20.1■□□□□ 0.81
COMMD4-213ENST00000565834 ZNF560Q96MR9 790 aa20.1■□□□□ 0.81
COMMD4-213ENST00000565834 GOLGA2P5Q9HBQ8 144 aa20.1■□□□□ 0.81
COMMD4-213ENST00000565834 TMEM161AQ9NX61 479 aa20.1■□□□□ 0.81
COMMD4-213ENST00000565834 MIOSQ9NXC5 875 aa20.1■□□□□ 0.81
COMMD4-213ENST00000565834 POLIQ9UNA4 740 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms