RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 PLD1Q13393 1074 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 TMEM132DQ14C87 1099 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 ZBTB6Q15916 424 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 ENOX2Q16206 610 aaKnown RBP18.17■□□□□ 0.5
USB1-211ENST00000565662 AXDND1Q5T1B0 1012 aaPredicted RBP18.17■□□□□ 0.5
USB1-211ENST00000565662 SPATA1Q5VX52 437 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 FAM173BQ6P4H8 233 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 CNNM4Q6P4Q7 775 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 MTSS1LQ765P7 747 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 LEMD2Q8NC56 503 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 C3orf58Q8NDZ4 430 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 LRRC15Q8TF66 581 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 POMGNT1Q8WZA1 660 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 DNAJC19Q96DA6 116 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 AVENQ9NQS1 362 aaPredicted RBP18.17■□□□□ 0.5
USB1-211ENST00000565662 DUSP12Q9UNI6 340 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 UBE4BO95155 1302 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 MYMKA6NI61 221 aa18.16■□□□□ 0.5
USB1-211ENST00000565662 OR6C75A6NL08 312 aa18.16■□□□□ 0.5
USB1-211ENST00000565662 WEE2P0C1S8 567 aa18.16■□□□□ 0.5
USB1-211ENST00000565662 ATF2P15336 505 aa18.16■□□□□ 0.5
USB1-211ENST00000565662 TYMPP19971 482 aa18.16■□□□□ 0.5
USB1-211ENST00000565662 FSHRP23945 695 aa18.16■□□□□ 0.5
USB1-211ENST00000565662 NMT1P30419 496 aaKnown RBP18.16■□□□□ 0.5
USB1-211ENST00000565662 PNPLA4P41247 253 aa18.16■□□□□ 0.5
USB1-211ENST00000565662 BRCC3P46736 316 aa18.16■□□□□ 0.5
USB1-211ENST00000565662 AARSP49588 968 aaKnown RBP eCLIP18.16■□□□□ 0.5
USB1-211ENST00000565662 SNRPFP62306 86 aaKnown RBP18.16■□□□□ 0.5
USB1-211ENST00000565662 MRPL58Q14197 206 aaKnown RBP18.16■□□□□ 0.5
USB1-211ENST00000565662 CTXN3Q4LDR2 81 aa18.16■□□□□ 0.5
USB1-211ENST00000565662 USP49Q70CQ1 688 aa18.16■□□□□ 0.5
USB1-211ENST00000565662 SYCP3Q8IZU3 236 aa18.16■□□□□ 0.5
USB1-211ENST00000565662 SLC7A14Q8TBB6 771 aa18.16■□□□□ 0.5
USB1-211ENST00000565662 ZNF560Q96MR9 790 aa18.16■□□□□ 0.5
USB1-211ENST00000565662 STRA6Q9BX79 667 aa18.16■□□□□ 0.5
USB1-211ENST00000565662 PANK4Q9NVE7 773 aa18.16■□□□□ 0.5
USB1-211ENST00000565662 LACTBL1A8MY62 500 aa18.15■□□□□ 0.5
USB1-211ENST00000565662 EIF3DO15371 548 aaKnown RBP eCLIP18.15■□□□□ 0.5
USB1-211ENST00000565662 ABLIM3O94929 683 aa18.15■□□□□ 0.5
USB1-211ENST00000565662 ROR1Q01973 937 aa18.15■□□□□ 0.5
USB1-211ENST00000565662 SMARCB1Q12824 385 aa18.15■□□□□ 0.5
USB1-211ENST00000565662 TCEAL8Q8IYN2 117 aa18.15■□□□□ 0.5
USB1-211ENST00000565662 CACTINQ8WUQ7 758 aaKnown RBP18.15■□□□□ 0.5
USB1-211ENST00000565662 C18orf25Q96B23 403 aaPredicted RBP18.15■□□□□ 0.5
USB1-211ENST00000565662 ASIC4Q96FT7 647 aa18.15■□□□□ 0.5
USB1-211ENST00000565662 CXCL16Q9H2A7 254 aa18.15■□□□□ 0.5
USB1-211ENST00000565662 KIAA1586Q9HCI6 787 aa18.15■□□□□ 0.5
USB1-211ENST00000565662 KBTBD4Q9NVX7 518 aa18.15■□□□□ 0.5
USB1-211ENST00000565662 HSFX1Q9UBD0 423 aa18.15■□□□□ 0.5
USB1-211ENST00000565662 TUBGCP4Q9UGJ1 667 aa18.15■□□□□ 0.5
USB1-211ENST00000565662 LIMD1Q9UGP4 676 aa18.15■□□□□ 0.5
USB1-211ENST00000565662 AFF4Q9UHB7 1163 aaKnown RBP18.15■□□□□ 0.5
USB1-211ENST00000565662 PRRG1O14668 218 aa18.14■□□□□ 0.49
USB1-211ENST00000565662 ZNF197O14709 1029 aa18.14■□□□□ 0.49
USB1-211ENST00000565662 TBC1D4O60343 1298 aa18.14■□□□□ 0.49
USB1-211ENST00000565662 OAZ2O95190 189 aa18.14■□□□□ 0.49
USB1-211ENST00000565662 ME1P48163 572 aa18.14■□□□□ 0.49
USB1-211ENST00000565662 MYBPC2Q14324 1141 aa18.14■□□□□ 0.49
USB1-211ENST00000565662 SURF1Q15526 300 aa18.14■□□□□ 0.49
USB1-211ENST00000565662 CD300LGQ6UXG3 332 aa18.14■□□□□ 0.49
USB1-211ENST00000565662 DSTYKQ6XUX3 929 aa18.14■□□□□ 0.49
USB1-211ENST00000565662 GET4Q7L5D6 327 aaPredicted RBP18.14■□□□□ 0.49
USB1-211ENST00000565662 HAPLN2Q9GZV7 340 aa18.14■□□□□ 0.49
USB1-211ENST00000565662 KCNK12Q9HB15 430 aa18.14■□□□□ 0.49
USB1-211ENST00000565662 CGNQ9P2M7 1197 aaKnown RBP18.14■□□□□ 0.49
USB1-211ENST00000565662 USP25Q9UHP3 1055 aa18.14■□□□□ 0.49
USB1-211ENST00000565662 CDH22Q9UJ99 828 aa18.14■□□□□ 0.49
USB1-211ENST00000565662 CDH7Q9ULB5 785 aa18.14■□□□□ 0.49
USB1-211ENST00000565662 MICAL2O94851 1124 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 MYL1P05976 194 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 SPATA31D3P0C874 917 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 LAMP2P13473 410 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 CPB1P15086 417 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 TNFSF9P41273 254 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 PTPN5P54829 565 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 PABPC1LQ4VXU2 614 aaKnown RBP18.13■□□□□ 0.49
USB1-211ENST00000565662 SEZ6Q53EL9 994 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 ZC2HC1CQ53FD0 456 aaPredicted RBP18.13■□□□□ 0.49
USB1-211ENST00000565662 IQCEQ6IPM2 695 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 SLC39A4Q6P5W5 647 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 SPATA31D4Q6ZUB0 917 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 PDILTQ8N807 584 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 SPATA18Q8TC71 538 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 FAM212AQ96EL1 285 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 CCDC34Q96HJ3 373 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 TRIM9Q9C026 710 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 MFSD1Q9H3U5 465 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 GDE1Q9NZC3 331 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 FBXL5Q9UKA1 691 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 R3HCC1Q9Y3T6 440 aaKnown RBP18.13■□□□□ 0.49
USB1-211ENST00000565662 ANK1P16157 1881 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 DOCK8Q8NF50 2099 aa18.13■□□□□ 0.49
USB1-211ENST00000565662 ZNF318Q5VUA4 2279 aa18.12■□□□□ 0.49
USB1-211ENST00000565662 MYO10Q9HD67 2058 aa18.12■□□□□ 0.49
USB1-211ENST00000565662 WDR27A2RRH5 827 aa18.12■□□□□ 0.49
USB1-211ENST00000565662 SRFP11831 508 aa18.12■□□□□ 0.49
USB1-211ENST00000565662 TAF6P49848 677 aa18.12■□□□□ 0.49
USB1-211ENST00000565662 KRT85P78386 507 aa18.12■□□□□ 0.49
USB1-211ENST00000565662 E2F4Q16254 413 aa18.12■□□□□ 0.49
USB1-211ENST00000565662 SV2CQ496J9 727 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms