RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 PCDHB12Q9Y5F1 795 aa6.87□□□□□ -1.31
UBFD1-204ENST00000565634 SPEGQ15772 3267 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 PRR5-ARHGAP8B1AHC4 643 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 ZBTB42B2RXF5 422 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 TGFBR3LH3BV60 316 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 GPR182O15218 404 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 CLASP2O75122 1294 aaKnown RBP6.86□□□□□ -1.31
UBFD1-204ENST00000565634 PPFIA4O75335 1185 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 PSMD10O75832 226 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 EOMESO95936 686 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 LGALS2P05162 132 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 PROS1P07225 676 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 PDCP20941 246 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 CDK11BP21127 795 aaKnown RBP6.86□□□□□ -1.31
UBFD1-204ENST00000565634 CD72P21854 359 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 TXKP42681 527 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 MAPK8P45983 427 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 RAC1P63000 192 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 ARHGAP8P85298 464 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 PLAURQ03405 335 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 TRAF1Q13077 416 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 AP3B2Q13367 1082 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 GNL2Q13823 731 aaKnown RBP6.86□□□□□ -1.31
UBFD1-204ENST00000565634 DSC3Q14574 896 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 HIF1AQ16665 826 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 Q4G0T1 1027 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 FBXO47Q5MNV8 452 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 CELF3Q5SZQ8 465 aaKnown RBP6.86□□□□□ -1.31
UBFD1-204ENST00000565634 ZC3H14Q6PJT7 736 aaKnown RBP6.86□□□□□ -1.31
UBFD1-204ENST00000565634 B3GNT9Q6UX72 402 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 PPTC7Q8NI37 304 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 ATRIPQ8WXE1 791 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 PIK3R5Q8WYR1 880 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 SLC5A5Q92911 643 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 DUSP9Q99956 384 aaKnown RBP6.86□□□□□ -1.31
UBFD1-204ENST00000565634 MMTAG2Q9BU76 263 aaKnown RBP6.86□□□□□ -1.31
UBFD1-204ENST00000565634 PANK2Q9BZ23 570 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 UNC45AQ9H3U1 944 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 MLXIPQ9HAP2 919 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 POLD4Q9HCU8 107 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 KCNMB3Q9NPA1 279 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 SPATA6Q9NWH7 488 aaPredicted RBP6.86□□□□□ -1.31
UBFD1-204ENST00000565634 CHMP5Q9NZZ3 219 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 ZFATQ9P243 1243 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 WRAP73Q9P2S5 460 aaPredicted RBP6.86□□□□□ -1.31
UBFD1-204ENST00000565634 PARP2Q9UGN5 583 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 DDX25Q9UHL0 483 aaKnown RBP6.86□□□□□ -1.31
UBFD1-204ENST00000565634 RCOR1Q9UKL0 485 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 PNMA2Q9UL42 364 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 DUSP12Q9UNI6 340 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 CDY2AQ9Y6F7 541 aa6.86□□□□□ -1.31
UBFD1-204ENST00000565634 MTCL1Q9Y4B5 1905 aaKnown RBP6.86□□□□□ -1.31
UBFD1-204ENST00000565634 NBEAQ8NFP9 2946 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 A0A087X0B3 334 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 TMEM150BA6NC51 233 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 SCAMP3O14828 347 aaKnown RBP6.85□□□□□ -1.31
UBFD1-204ENST00000565634 SLC30A4O14863 429 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 NDUFB5O43674 189 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 MGEA5O60502 916 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 N4BP1O75113 896 aaKnown RBP6.85□□□□□ -1.31
UBFD1-204ENST00000565634 RGS9O75916 674 aaPredicted RBP6.85□□□□□ -1.31
UBFD1-204ENST00000565634 STBD1O95210 358 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 CXCL14O95715 111 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 FGFR1P11362 822 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 HOXB8P17481 243 aaPredicted RBP6.85□□□□□ -1.31
UBFD1-204ENST00000565634 SDHBP21912 280 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 UBA1P22314 1058 aaKnown RBP6.85□□□□□ -1.31
UBFD1-204ENST00000565634 MTHFRP42898 656 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 EIF1AXP47813 144 aaKnown RBP6.85□□□□□ -1.31
UBFD1-204ENST00000565634 IGBP1P78318 339 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 NRG1Q02297 640 aaPredicted RBP6.85□□□□□ -1.31
UBFD1-204ENST00000565634 LMNB2Q03252 620 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 SPIRE1Q08AE8 756 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 MGAT3Q09327 533 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 SLC39A14Q15043 492 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 CCDC6Q16204 474 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 UGCGQ16739 394 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 AXDND1Q5T1B0 1012 aaPredicted RBP6.85□□□□□ -1.31
UBFD1-204ENST00000565634 PPP4R3AQ6IN85 833 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 C19orf48Q6RUI8 117 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 LRRC55Q6ZSA7 311 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 SLC44A3Q8N4M1 653 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 LINC00301Q8NCQ3 95 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 LMBR1Q8WVP7 490 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 MRPS27Q92552 414 aaKnown RBP6.85□□□□□ -1.31
UBFD1-204ENST00000565634 UBXN4Q92575 508 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 CASP10Q92851 521 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 EPSTI1Q96J88 318 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 PNMA5Q96PV4 448 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 PLIN2Q99541 437 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 MPHOSPH6Q99547 160 aaKnown RBP6.85□□□□□ -1.31
UBFD1-204ENST00000565634 CDCA3Q99618 268 aaPredicted RBP6.85□□□□□ -1.31
UBFD1-204ENST00000565634 SH2D3AQ9BRG2 576 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 RPP25Q9BUL9 199 aaKnown RBP6.85□□□□□ -1.31
UBFD1-204ENST00000565634 FAM49AQ9H0Q0 323 aaPredicted RBP6.85□□□□□ -1.31
UBFD1-204ENST00000565634 GLT8D2Q9H1C3 349 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 TMX1Q9H3N1 280 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 ZSCAN16Q9H4T2 348 aaPredicted RBP6.85□□□□□ -1.31
UBFD1-204ENST00000565634 CWH43Q9H720 699 aa6.85□□□□□ -1.31
UBFD1-204ENST00000565634 RGL1Q9NZL6 768 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms