RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 ST6GALNAC4Q9H4F1 302 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 DNMT3BQ9UBC3 853 aaKnown RBP10.92□□□□□ -0.66
CMTM3-209ENST00000565003 CCDC39Q9UFE4 941 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 FBXL5Q9UKA1 691 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 FBXL21Q9UKT6 434 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 CDH7Q9ULB5 785 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 UBQLN1Q9UMX0 589 aaKnown RBP10.92□□□□□ -0.66
CMTM3-209ENST00000565003 NUMBLQ9Y6R0 609 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 MORC2Q9Y6X9 1032 aaPredicted RBP10.92□□□□□ -0.66
CMTM3-209ENST00000565003 H7C4K7 107 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 PPP1R37O75864 691 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 SEC24AO95486 1093 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 CFHP08603 1231 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 NFICP08651 508 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 CYP3A5P20815 502 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 TXLNAP40222 546 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 NASPP49321 788 aaPredicted RBP10.91□□□□□ -0.66
CMTM3-209ENST00000565003 AARSP49588 968 aaKnown RBP eCLIP10.91□□□□□ -0.66
CMTM3-209ENST00000565003 ACOT2P49753 483 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 MRE11P49959 708 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 SLC39A14Q15043 492 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 SLC5A9Q2M3M2 681 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 CTXN3Q4LDR2 81 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 PABPC1LQ4VXU2 614 aaKnown RBP10.91□□□□□ -0.66
CMTM3-209ENST00000565003 RRAGBQ5VZM2 374 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 ASTLQ6HA08 431 aaPredicted RBP10.91□□□□□ -0.66
CMTM3-209ENST00000565003 JADE1Q6IE81 842 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 ZNF280DQ6N043 979 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 PARM1Q6UWI2 310 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 ZNF720Q7Z2F6 126 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 SIX5Q8N196 739 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 FGF14Q92915 247 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 NXPE3Q969Y0 559 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 DNAJC19Q96DA6 116 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 RPP25Q9BUL9 199 aaKnown RBP10.91□□□□□ -0.66
CMTM3-209ENST00000565003 ZSCAN16Q9H4T2 348 aaPredicted RBP10.91□□□□□ -0.66
CMTM3-209ENST00000565003 RPF1Q9H9Y2 349 aaKnown RBP10.91□□□□□ -0.66
CMTM3-209ENST00000565003 CPSF3Q9UKF6 684 aaKnown RBP10.91□□□□□ -0.66
CMTM3-209ENST00000565003 PCDHB8Q9UN66 801 aa10.91□□□□□ -0.66
CMTM3-209ENST00000565003 TIMM13Q9Y5L4 95 aaPredicted RBP10.91□□□□□ -0.66
CMTM3-209ENST00000565003 ANK1P16157 1881 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 ARHGEF37A1IGU5 675 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 KRBA1A5PL33 1030 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 M0QZQ0 153 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 PRRG1O14668 218 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 GALR2O43603 387 aaPredicted RBP10.9□□□□□ -0.66
CMTM3-209ENST00000565003 PI15O43692 258 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 RHOP08100 348 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 SRFP11831 508 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 ATF2P15336 505 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 ABCD1P33897 745 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 STAT6P42226 847 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 KCNA1Q09470 495 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 SPATA1Q5VX52 437 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 POTEHQ6S545 545 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 SV2BQ7L1I2 683 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 RTL10Q7L3V2 364 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 NPAS3Q8IXF0 933 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 TCEAL8Q8IYN2 117 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 LINC00301Q8NCQ3 95 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 APPL2Q8NEU8 664 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 GPR152Q8TDT2 470 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 ING5Q8WYH8 240 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 SNX21Q969T3 373 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 FAM212AQ96EL1 285 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 STRA6Q9BX79 667 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 PANK2Q9BZ23 570 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 CYP4F11Q9HBI6 524 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 FAM86C1Q9NVL1 165 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 TBC1D7Q9P0N9 293 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 WNT16Q9UBV4 365 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 INSL5Q9Y5Q6 135 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 STYXL1Q9Y6J8 313 aa10.9□□□□□ -0.66
CMTM3-209ENST00000565003 ZFP37Q9Y6Q3 630 aaPredicted RBP10.9□□□□□ -0.66
CMTM3-209ENST00000565003 MYH15Q9Y2K3 1946 aa10.9□□□□□ -0.67
CMTM3-209ENST00000565003 FRMD3A2A2Y4 597 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 H0Y858 1186 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 NRG2O14511 850 aaPredicted RBP10.89□□□□□ -0.67
CMTM3-209ENST00000565003 SPTLC1O15269 473 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 VNN2O95498 520 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 LRG1P02750 347 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 AOC1P19801 751 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 ADSSP30520 456 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 ELF1P32519 619 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 CLCN5P51795 746 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 CASP5P51878 434 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 NUBP1P53384 320 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 YWHAHQ04917 246 aaPredicted RBP10.89□□□□□ -0.67
CMTM3-209ENST00000565003 ADCY1Q08828 1119 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 STK38Q15208 465 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 C9orf57Q5W0N0 161 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 TPGS2Q68CL5 300 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 ADALQ6DHV7 355 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 CRELD2Q6UXH1 353 aaPredicted RBP10.89□□□□□ -0.67
CMTM3-209ENST00000565003 RNF19BQ6ZMZ0 732 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 CCDC73Q6ZRK6 1079 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 CD302Q8IX05 232 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 PDILTQ8N807 584 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 BEST2Q8NFU1 509 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 HVCN1Q96D96 273 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms