RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 OR5B17Q8NGF7 314 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.96□□□□□ -0.49
SF3B3-205ENST00000564899 SEPT8Q92599 483 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 APBB2Q92870 758 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 IQCDQ96DY2 449 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 KIF12Q96FN5 646 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 ANKRD36BP1Q96IX9 119 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 TRAIPQ9BWF2 469 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 RNF39Q9H2S5 420 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 C2CD2Q9Y426 696 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 MYO7AQ13402 2215 aa11.96□□□□□ -0.49
SF3B3-205ENST00000564899 DMDP11532 3685 aa11.96□□□□□ -0.5
SF3B3-205ENST00000564899 A0A0U1RQF3 1178 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 EPHB6O15197 1021 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 ZNF623O75123 536 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 PHACTR2O75167 634 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 HLA-DRAP01903 254 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 CXCL10P02778 98 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 GYPCP04921 128 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 PFKMP08237 780 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 ACTN1P12814 892 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 CASP14P31944 242 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 PIK3CAP42336 1068 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 WDR5P61964 334 aaKnown RBP11.95□□□□□ -0.5
SF3B3-205ENST00000564899 FIGNQ5HY92 759 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 TRIM65Q6PJ69 517 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 FAM43BQ6ZT52 329 aaPredicted RBP11.95□□□□□ -0.5
SF3B3-205ENST00000564899 MRPL10Q7Z7H8 261 aaKnown RBP11.95□□□□□ -0.5
SF3B3-205ENST00000564899 NT5DC4Q86YG4 428 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 RNF169Q8NCN4 708 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 CCDC150Q8NCX0 1101 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 EHBP1Q8NDI1 1231 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 TAS1R2Q8TE23 839 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 CACTINQ8WUQ7 758 aaKnown RBP11.95□□□□□ -0.5
SF3B3-205ENST00000564899 CPLX3Q8WVH0 158 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 LINC01599Q8WXQ3 324 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 PGBD4Q96DM1 585 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 TTYH3Q9C0H2 523 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 GANQ9H2C0 597 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 UBE2ZQ9H832 354 aaPredicted RBP11.95□□□□□ -0.5
SF3B3-205ENST00000564899 PLCB1Q9NQ66 1216 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 RGS18Q9NS28 235 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 C1orf112Q9NSG2 853 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 RAB20Q9NX57 234 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 KLK14Q9P0G3 267 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 CNTN3Q9P232 1028 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 DERAQ9Y315 318 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 COQ4Q9Y3A0 265 aa11.95□□□□□ -0.5
SF3B3-205ENST00000564899 A0A1W2PQJ5 194 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 PRR33A8MZF0 331 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 AKR1B15C9JRZ8 316 aaPredicted RBP11.94□□□□□ -0.5
SF3B3-205ENST00000564899 MFAP3LO75121 409 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 KCNA5P22460 613 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 RFC2P35250 354 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 POLR2FP61218 127 aaKnown RBP11.94□□□□□ -0.5
SF3B3-205ENST00000564899 APBA1Q02410 837 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 GOLGA8FQ08AF8 430 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 GOLGA8DPQ0D2H9 430 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 NCOA4Q13772 614 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 GLRA4Q5JXX5 417 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 KLHDC7AQ5VTJ3 777 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 ALKAL1Q6UXT8 129 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 SLC24A5Q71RS6 500 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 TRAPPC11Q7Z392 1133 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 CACNA2D4Q7Z3S7 1137 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 RTN4RL1Q86UN2 441 aaPredicted RBP11.94□□□□□ -0.5
SF3B3-205ENST00000564899 ECHDC2Q86YB7 292 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 CNGA4Q8IV77 575 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 GJD3Q8N144 294 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 LMO3Q8TAP4 145 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 PHOSPHO2Q8TCD6 241 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 SEMA4DQ92854 862 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 LPPQ93052 612 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 TSPAN18Q96SJ8 248 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 PHOX2BQ99453 314 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 SIX2Q9NPC8 291 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 CEP72Q9P209 647 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 CAPN11Q9UMQ6 739 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 GIT1Q9Y2X7 761 aa11.94□□□□□ -0.5
SF3B3-205ENST00000564899 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.93□□□□□ -0.5
SF3B3-205ENST00000564899 LINC01553A4QN01 128 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 MEIS3P2A8K0S8 358 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 C9IYK1 514 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 LRRN2O75325 713 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 NOL4O94818 638 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 CLSTN1O94985 981 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 VNN1O95497 513 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 UCHL3P15374 230 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 KCNE1P15382 129 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 ATF7P17544 494 aaPredicted RBP11.93□□□□□ -0.5
SF3B3-205ENST00000564899 MLH1P40692 756 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 ADKP55263 362 aaKnown RBP11.93□□□□□ -0.5
SF3B3-205ENST00000564899 NHLH1Q02575 133 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 LRMPQ12912 555 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 TRPC3Q13507 836 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 ARID5BQ14865 1188 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 XKR4Q5GH76 650 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 WDR44Q5JSH3 913 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 DPY19L2P1Q6NXN4 242 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 FAM117BQ6P1L5 589 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms